mRNA_P-wetherbeei_contig5824.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A521LUP1_9HYPH (Rrf2 family transcriptional regulator n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LUP1_9HYPH) HSP 1 Score: 284 bits (727), Expect = 9.240e-97 Identity = 143/152 (94.08%), Postives = 145/152 (95.39%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGLDAHSDSAARQVVL 456
MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDR QITVGEVVRVVRNLEAETEP+DPSVGSPLAHEVVWPVWE+LRD MMAQLDGISIDDLCRQARDKGLDA S RQVVL
Sbjct: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRTQITVGEVVRVVRNLEAETEPSDPSVGSPLAHEVVWPVWERLRDSMMAQLDGISIDDLCRQARDKGLDARSGPPPRQVVL 152
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A1E4HMV4_9PROT (Rrf2 family transcriptional regulator n=1 Tax=Rhodospirillales bacterium SCN 65-16 TaxID=1660166 RepID=A0A1E4HMV4_9PROT) HSP 1 Score: 252 bits (644), Expect = 4.160e-84 Identity = 125/150 (83.33%), Postives = 137/150 (91.33%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGLD----AHSDSA 438
MPRLSKKTMFA+EAVLDVAFHVGEHPVRS DITERQRIPKRYLEQVLQHLVRAGIL+GKRGPRGGYRLGRDR IT+GEVVRVVRNLE ETEP+DPS+GSPLAHEVVWP+WEKLR+ MM+QLD I+IDDLC++A KGLD AH+D A
Sbjct: 1 MPRLSKKTMFAIEAVLDVAFHVGEHPVRSGDITERQRIPKRYLEQVLQHLVRAGILNGKRGPRGGYRLGRDRGNITLGEVVRVVRNLEVETEPSDPSIGSPLAHEVVWPLWEKLREEMMSQLDNITIDDLCQRAHAKGLDVSPGAHADHA 150
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A1H8UAG7_9PROT (Transcriptional regulator, BadM/Rrf2 family n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8UAG7_9PROT) HSP 1 Score: 251 bits (640), Expect = 1.810e-83 Identity = 122/140 (87.14%), Postives = 133/140 (95.00%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGLD 420
MPRLSKKTMFA+EAVLDVAFHVGEHPVRS DITERQRIPKRYLEQVLQHLVRAGIL+GKRGPRGGYRLGR++ IT+GEVVRVVR LEAETEPNDPS+GSPLAHEVVWP+WEKLRD MMAQLD I+I+DLC++AR KGLD
Sbjct: 1 MPRLSKKTMFAIEAVLDVAFHVGEHPVRSGDITERQRIPKRYLEQVLQHLVRAGILAGKRGPRGGYRLGREQQSITLGEVVRVVRKLEAETEPNDPSIGSPLAHEVVWPMWEKLRDDMMAQLDNITIEDLCQRARAKGLD 140
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A1Q3KNP2_9PROT (Transcriptional regulator n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1Q3KNP2_9PROT) HSP 1 Score: 250 bits (639), Expect = 3.260e-83 Identity = 122/147 (82.99%), Postives = 135/147 (91.84%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGLDAHSDSAA 441
MPRLSKKTMFA+EAVLDVAFHVGEHPVRS DITERQRIPKRYLEQVLQHLVRAGIL+GKRGPRGGYRLGRD+ IT+GEVVRVVRNLE ETEPNDPS+GSPLAHEVVWP+WEKLR+ MMAQLD I+I++LC++A KGLD +AA
Sbjct: 1 MPRLSKKTMFAIEAVLDVAFHVGEHPVRSGDITERQRIPKRYLEQVLQHLVRAGILNGKRGPRGGYRLGRDKVAITLGEVVRVVRNLEVETEPNDPSIGSPLAHEVVWPLWEKLREEMMAQLDNITIEELCQRAHAKGLDTPPQAAA 147
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A259MSE1_9PROT (Transcriptional regulator n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MSE1_9PROT) HSP 1 Score: 250 bits (638), Expect = 3.530e-83 Identity = 120/139 (86.33%), Postives = 132/139 (94.96%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGL 417
MPRLSKKTMFA+EAVLDVAFH+G+HPVRS DITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRD+A IT+GEVVRVVRNLE ETEP+DPS+GSPLAHEVVWP+WEKLR+ MMAQLD ++I+DLC QAR KGL
Sbjct: 1 MPRLSKKTMFAIEAVLDVAFHMGDHPVRSGDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDKASITLGEVVRVVRNLEVETEPSDPSIGSPLAHEVVWPLWEKLREEMMAQLDNVTIEDLCEQARSKGL 139
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A1T4PT02_9HYPH (Transcriptional regulator, BadM/Rrf2 family n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4PT02_9HYPH) HSP 1 Score: 247 bits (630), Expect = 5.850e-82 Identity = 126/153 (82.35%), Postives = 138/153 (90.20%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGLDAHSDSA-ARQVVL 456
MPRLSKKTMFA+EAVLDVAFHVG+HPVRS DITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRD+ QIT+GEVVRVVR LEAETEP+D SVGSPLAHEVVWP+WEKLRD MM+QLD I+I++LC+QAR KGL + A QVVL
Sbjct: 1 MPRLSKKTMFAIEAVLDVAFHVGDHPVRSGDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDKEQITLGEVVRVVRKLEAETEPSDLSVGSPLAHEVVWPMWEKLRDDMMSQLDTITIEELCQQARAKGLRTVQNRLHATQVVL 153
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A537N6X1_9PROT (Rrf2 family transcriptional regulator n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N6X1_9PROT) HSP 1 Score: 244 bits (624), Expect = 4.970e-81 Identity = 120/140 (85.71%), Postives = 132/140 (94.29%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGLD 420
MPRLSKKTMFA+EAVLDVAFHVG++PVRS DITERQRIPKRYLEQVLQHLVRAGIL+GKRGPRGGYRLGRDR +IT+GEVVRVVRNLEAETEPND SVGSPLAHE+VWP WEKLR+ MM QLD I+I+DLC++AR KGLD
Sbjct: 1 MPRLSKKTMFAIEAVLDVAFHVGDNPVRSGDITERQRIPKRYLEQVLQHLVRAGILTGKRGPRGGYRLGRDRGRITLGEVVRVVRNLEAETEPNDLSVGSPLAHEIVWPTWEKLREEMMTQLDTITIEDLCQRARAKGLD 140
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A5C8PVH9_9HYPH (Rrf2 family transcriptional regulator n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C8PVH9_9HYPH) HSP 1 Score: 204 bits (518), Expect = 6.290e-65 Identity = 95/139 (68.35%), Postives = 119/139 (85.61%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGL 417
MPRLSKKTMFA+EAVLD+A + G+ PVRS DIT RQ IPKRYLEQVLQHLVR G+L+GKRGPRGGY LGR+R +I++G+++RVVR LE ETEP D +VGS LAH VVWP W +LRD MMA++DGI+++D+ R AR++G+
Sbjct: 1 MPRLSKKTMFAIEAVLDIAMNGGDAPVRSGDITRRQNIPKRYLEQVLQHLVREGVLAGKRGPRGGYMLGRERRRISLGDIIRVVRQLEVETEPQDETVGSALAHMVVWPTWNRLRDEMMARMDGITVEDMVRDARERGV 139
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: UPI001A96AE1D (Rrf2 family transcriptional regulator n=1 Tax=Arenibaculum pallidiluteum TaxID=2812559 RepID=UPI001A96AE1D) HSP 1 Score: 178 bits (452), Expect = 6.930e-55 Identity = 89/145 (61.38%), Postives = 114/145 (78.62%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGLDAHSDS 435
M R+SKKTMFA+EAVLD+A++ G PV+S +IT RQ IPKRYLEQVLQ LVRAGILSG RGPRGGYRL R+R +I+VG+VVRVVR +E +P + GS L H+VV P+W +L+D MMA+LD SI+DLC +A + G+++ S S
Sbjct: 1 MLRISKKTMFAIEAVLDIAYNAGSEPVQSGEITRRQGIPKRYLEQVLQQLVRAGILSGVRGPRGGYRLARERRRISVGDVVRVVRGMETAPDPLEEPTGSELGHKVVRPMWLRLQDHMMAELDRTSIEDLCLRANEAGIESESHS 145
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Match: A0A2S6TK02_9PROT (HTH-type transcriptional regulator IscR n=1 Tax=Alphaproteobacteria bacterium MarineAlpha4_Bin2 TaxID=2013075 RepID=A0A2S6TK02_9PROT) HSP 1 Score: 173 bits (438), Expect = 9.610e-53 Identity = 81/152 (53.29%), Postives = 115/152 (75.66%), Query Frame = 1
Query: 1 MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLVRAGILSGKRGPRGGYRLGRDRAQITVGEVVRVVRNLEAETEPNDPSVGSPLAHEVVWPVWEKLRDGMMAQLDGISIDDLCRQARDKGLDAHSDSAARQVVL 456
M RLS+K MFA+EAV+D+A++ + PV+S DI RQ IP+RYLEQVLQ LVR G+LSG RGPRGGYRL R+R ++T+G++ R+V ++E T+P + GS L H+V+ P+W++L+D +A+LD +SIDDLCR ARD G++ + AA V+
Sbjct: 1 MLRLSRKLMFAIEAVVDIAYNATDIPVQSKDIAVRQDIPRRYLEQVLQRLVREGVLSGVRGPRGGYRLARERRRVTLGQITRIVADMEETTDPVESCTGSDLGHQVLRPIWQELQDEALAKLDNVSIDDLCRHARDSGVEGACEPAALDFVI 152 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5824.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5824.2.1 >prot_P-wetherbeei_contig5824.2.1 ID=prot_P-wetherbeei_contig5824.2.1|Name=mRNA_P-wetherbeei_contig5824.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=153bp MPRLSKKTMFALEAVLDVAFHVGEHPVRSSDITERQRIPKRYLEQVLQHLback to top mRNA from alignment at P-wetherbeei_contig5824:1604..2062+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5824.2.1 ID=mRNA_P-wetherbeei_contig5824.2.1|Name=mRNA_P-wetherbeei_contig5824.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig5824:1604..2062+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5824:1604..2062+ >mRNA_P-wetherbeei_contig5824.2.1 ID=mRNA_P-wetherbeei_contig5824.2.1|Name=mRNA_P-wetherbeei_contig5824.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=459bp|location=Sequence derived from alignment at P-wetherbeei_contig5824:1604..2062+ (Phaeothamnion wetherbeei SAG_119_79)back to top |