mRNA_P-wetherbeei_contig5824.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5824.1.1
Unique NamemRNA_P-wetherbeei_contig5824.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A521LUR9_9HYPH (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Reyranella sp. TaxID=1929291 RepID=A0A521LUR9_9HYPH)

HSP 1 Score: 292 bits (747), Expect = 1.420e-99
Identity = 152/156 (97.44%), Postives = 153/156 (98.08%), Query Frame = 1 
Query:    1 MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGVLTGD 468
            MNGVESVEIEVVRL HGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARA+WREVGELDRTARG GGFGSTGV TGD
Sbjct:    1 MNGVESVEIEVVRLAHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAIWREVGELDRTARGAGGFGSTGVATGD 156
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A521LQG5_9HYPH (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=3 Tax=Reyranella TaxID=445219 RepID=A0A521LQG5_9HYPH)

HSP 1 Score: 266 bits (679), Expect = 2.610e-89
Identity = 136/152 (89.47%), Postives = 143/152 (94.08%), Query Frame = 1 
Query:    1 MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGV 456
            M GVES+EIEVVRLPHGRDL LPDYATA+AAGADLLAAID +IELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAK+G+TVANAPGTIDADYRGEVGVILINL +EPF+I RGMRIAQLVIARHARAVWREV  LD TARG GGFGSTGV
Sbjct:    1 MKGVESIEIEVVRLPHGRDLQLPDYATASAAGADLLAAIDADIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKHGVTVANAPGTIDADYRGEVGVILINLGKEPFRIERGMRIAQLVIARHARAVWREVSSLDETARGAGGFGSTGV 152
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A1H8UAC3_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1H8UAC3_9PROT)

HSP 1 Score: 265 bits (676), Expect = 8.850e-89
Identity = 135/155 (87.10%), Postives = 145/155 (93.55%), Query Frame = 1 
Query:    1 MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGVLTG 465
            M GVE+VEIEVVRL H  DLALPDYATAAAAGADLLAAID +IELGPLERKIVPTGIS+ALPVGFEAQVRPRSGLAAKNG+TVANAPGT+DADYRGE+GVILINLS+EPF+I+RGMRIAQLV+ARHARAVWREV ELDRTARG  GFGSTGV  G
Sbjct:    1 MKGVETVEIEVVRLAHAHDLALPDYATAAAAGADLLAAIDQDIELGPLERKIVPTGISIALPVGFEAQVRPRSGLAAKNGVTVANAPGTVDADYRGEIGVILINLSKEPFRISRGMRIAQLVVARHARAVWREVSELDRTARGAEGFGSTGVTAG 155
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A1T4PUW9_9HYPH (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4PUW9_9HYPH)

HSP 1 Score: 261 bits (667), Expect = 2.160e-87
Identity = 134/158 (84.81%), Postives = 144/158 (91.14%), Query Frame = 1 
Query:    1 MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGVLTGDGT 474
            M GVE VEI+VVRL HGRDLALPDYATAAAAGADLLAAID +IELGPLER+IVPTGIS+ALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVIL+NLS+E F+I+RGMRIAQLV+ARHARA+WREV  LD T RG GGFGSTGV  G  T
Sbjct:    2 MTGVEGVEIKVVRLAHGRDLALPDYATAAAAGADLLAAIDQDIELGPLERRIVPTGISIALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILVNLSKESFRISRGMRIAQLVVARHARAIWREVSALDETERGAGGFGSTGVAAGSST 159
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A259MTJ7_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A259MTJ7_9PROT)

HSP 1 Score: 257 bits (657), Expect = 6.960e-86
Identity = 130/155 (83.87%), Postives = 141/155 (90.97%), Query Frame = 1 
Query:    1 MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGVLTG 465
            M GVESVEIE+VRLPHG DL LPDYATAAAAGADLLAAI   IELGPLER+IVPTG+S+ALPVGFEAQVRPRSGLAAK+G+TVANAPGTIDADYRGEVGVILINL +EPF+I RGMRIAQ++IARHARA WREV  LD+TARG GGFGSTGV  G
Sbjct:    1 MKGVESVEIEIVRLPHGHDLPLPDYATAAAAGADLLAAIGEPIELGPLERRIVPTGVSIALPVGFEAQVRPRSGLAAKHGVTVANAPGTIDADYRGEVGVILINLGKEPFRIERGMRIAQIIIARHARAAWREVSSLDQTARGAGGFGSTGVTAG 155
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A537N7U2_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537N7U2_9PROT)

HSP 1 Score: 255 bits (652), Expect = 3.890e-85
Identity = 127/148 (85.81%), Postives = 143/148 (96.62%), Query Frame = 1 
Query:   13 ESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGV 456
            E+VEIE+VRLPHGRDL LPDYATAAAAGADLLAAI+ +IEL PLER+IVPTGIS+ALP+GFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVIL+NLS++PF+I+RGMRIAQL++ARHARAVWREV +LD+TARG GGFGSTGV
Sbjct:    4 ETVEIEIVRLPHGRDLQLPDYATAAAAGADLLAAIEADIELKPLERRIVPTGISIALPLGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILVNLSQQPFRISRGMRIAQLIVARHARAVWREVSQLDQTARGAGGFGSTGV 151
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A6N7A365_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A6N7A365_9PROT)

HSP 1 Score: 254 bits (650), Expect = 8.120e-85
Identity = 129/152 (84.87%), Postives = 141/152 (92.76%), Query Frame = 1 
Query:    1 MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGV 456
            M GVES+EIE+VRLPHG+ L LPDYATAAAAGADLLAAIDG+IEL PLER+IVPTG+S+ALPVGFEAQVRPRSGLAAK+GITVANAPGTIDADYRGEVGVILINL +E F+I RGMRIAQ++IARHARAVWREV  LD TARG GGFGSTGV
Sbjct:    1 MAGVESIEIEIVRLPHGQGLQLPDYATAAAAGADLLAAIDGDIELAPLERRIVPTGLSIALPVGFEAQVRPRSGLAAKHGITVANAPGTIDADYRGEVGVILINLGKETFRIERGMRIAQIIIARHARAVWREVSTLDETARGAGGFGSTGV 152
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A1Q3KNX3_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Alphaproteobacteria bacterium 65-37 TaxID=1895711 RepID=A0A1Q3KNX3_9PROT)

HSP 1 Score: 251 bits (642), Expect = 1.540e-83
Identity = 127/155 (81.94%), Postives = 138/155 (89.03%), Query Frame = 1 
Query:    1 MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGVLTG 465
            M GVESVEIE+VRL H RDL LPDYAT AAAGADLLAAID  IELGPLER+IVPTGIS+ALPVGFEAQVRPRSGLAAK+GIT+ N PGTIDADYRGE+GVILINL +EPF+I RGMRIAQ+++ARHARA WREV  LD TARG GGFGSTGV TG
Sbjct:    1 MKGVESVEIEIVRLAHARDLPLPDYATTAAAGADLLAAIDQPIELGPLERRIVPTGISIALPVGFEAQVRPRSGLAAKHGITLVNTPGTIDADYRGEIGVILINLGKEPFRIERGMRIAQMIVARHARAAWREVATLDETARGAGGFGSTGVQTG 155
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A1E4HN46_9PROT (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E4HN46_9PROT)

HSP 1 Score: 249 bits (636), Expect = 1.260e-82
Identity = 126/155 (81.29%), Postives = 139/155 (89.68%), Query Frame = 1 
Query:    1 MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGVLTG 465
            M GVES+EIE+VRL H RDL LPDYAT+AAAGADLLAAID  +ELG LER+IVPTGIS+ALPVGFEAQVRPRSGLAAK+G+TVANAPGTIDADYRGEVGVIL+NL +EPF+I RGMRIAQ+V+ARHARA WREV  LD TARG GGFGSTGV  G
Sbjct:    1 MKGVESIEIEIVRLAHARDLPLPDYATSAAAGADLLAAIDQPVELGSLERRIVPTGISIALPVGFEAQVRPRSGLAAKHGVTVANAPGTIDADYRGEVGVILVNLGKEPFRIERGMRIAQMVVARHARAAWREVESLDETARGAGGFGSTGVGAG 155
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BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Match: A0A5C5TQS3_9HYPH (Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Reyranella sp. CPCC 100927 TaxID=2599616 RepID=A0A5C5TQS3_9HYPH)

HSP 1 Score: 217 bits (552), Expect = 5.270e-70
Identity = 113/148 (76.35%), Postives = 123/148 (83.11%), Query Frame = 1 
Query:   13 ESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLERKIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGVILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGSTGV 456
            + V I+V RLPH  DL LP YATA AAG DLLAAIDG++ L PL R IVPTG+ +ALP GFEAQVRPRSGLAAKNG+TVANAPGTIDADYRGEVGVIL+NLS EPF ITRGMRIAQ+VIARH +A WREV  L  TARG GGFGSTG 
Sbjct:    3 DPVIIDVKRLPHAADLPLPAYATAMAAGMDLLAAIDGDVVLAPLGRAIVPTGLQIALPPGFEAQVRPRSGLAAKNGVTVANAPGTIDADYRGEVGVILVNLSAEPFTITRGMRIAQMVIARHEQARWREVEVLAETARGAGGFGSTGT 150
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5824.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A521LUR9_9HYPH1.420e-9997.44Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A521LQG5_9HYPH2.610e-8989.47Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A1H8UAC3_9PROT8.850e-8987.10Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A1T4PUW9_9HYPH2.160e-8784.81Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A259MTJ7_9PROT6.960e-8683.87Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A537N7U2_9PROT3.890e-8585.81Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A6N7A365_9PROT8.120e-8584.87Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A1Q3KNX3_9PROT1.540e-8381.94Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A1E4HN46_9PROT1.260e-8281.29Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]
A0A5C5TQS3_9HYPH5.270e-7076.35Deoxyuridine 5'-triphosphate nucleotidohydrolase n... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5824contigP-wetherbeei_contig5824:1079..1552 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1205680.CAKO01000040_gene721
Preferred namedut
PFAMsdUTPase
Model size474
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00002
KEGG koko:K01520
KEGG ReactionR02100,R11896
KEGG Pathwayko00240,ko00983,ko01100,map00240,map00983,map01100
KEGG ModuleM00053
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.03e-83
EggNOG OGsCOG0756@1|root,COG0756@2|Bacteria,1RA7P@1224|Proteobacteria,2U7B5@28211|Alphaproteobacteria,2JS8T@204441|Rhodospirillales
EC3.6.1.23
DescriptionThis enzyme is involved in nucleotide metabolism it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA
Cds size474
COG categoryF
BRITEko00000,ko00001,ko00002,ko01000,ko03400
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186862.8373668-CDS-P-wetherbeei_contig5824:1078..15521683186862.8373668-CDS-P-wetherbeei_contig5824:1078..1552Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5824 1079..1552 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5824.1.1prot_P-wetherbeei_contig5824.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5824 1079..1552 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5824.1.1

>prot_P-wetherbeei_contig5824.1.1 ID=prot_P-wetherbeei_contig5824.1.1|Name=mRNA_P-wetherbeei_contig5824.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=158bp
MNGVESVEIEVVRLPHGRDLALPDYATAAAAGADLLAAIDGEIELGPLER
KIVPTGISLALPVGFEAQVRPRSGLAAKNGITVANAPGTIDADYRGEVGV
ILINLSREPFKITRGMRIAQLVIARHARAVWREVGELDRTARGVGGFGST
GVLTGDGT
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mRNA from alignment at P-wetherbeei_contig5824:1079..1552+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5824.1.1 ID=mRNA_P-wetherbeei_contig5824.1.1|Name=mRNA_P-wetherbeei_contig5824.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig5824:1079..1552+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGGTGTCGAAAGCGTCGAGATCGAGGTGGTACGGCTGCCCCATGG
CCGTGACCTCGCTTTGCCTGATTACGCGACTGCCGCCGCCGCCGGTGCCG
ACCTCCTGGCCGCCATCGACGGCGAGATCGAGCTGGGGCCGCTCGAGCGC
AAGATCGTTCCAACAGGGATTTCGCTGGCACTGCCGGTCGGTTTCGAGGC
CCAGGTGCGGCCTCGGTCCGGCTTGGCGGCCAAGAACGGGATTACCGTGG
CCAACGCCCCCGGCACCATCGATGCCGATTATCGCGGCGAAGTAGGCGTG
ATCCTCATCAATCTCAGCCGCGAGCCATTCAAGATCACGCGCGGCATGCG
AATTGCACAACTGGTCATCGCCCGGCATGCCCGGGCAGTCTGGCGGGAAG
TCGGCGAACTCGATCGGACGGCGCGTGGCGTCGGCGGCTTTGGATCAACG
GGTGTTTTGACCGGGGACGGGACG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5824:1079..1552+

>mRNA_P-wetherbeei_contig5824.1.1 ID=mRNA_P-wetherbeei_contig5824.1.1|Name=mRNA_P-wetherbeei_contig5824.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=474bp|location=Sequence derived from alignment at P-wetherbeei_contig5824:1079..1552+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAACGGTGTCGAAAGCGTCGAGATCGAGGTGGTACGGCTGCCCCATGG
CCGTGACCTCGCTTTGCCTGATTACGCGACTGCCGCCGCCGCCGGTGCCG
ACCTCCTGGCCGCCATCGACGGCGAGATCGAGCTGGGGCCGCTCGAGCGC
AAGATCGTTCCAACAGGGATTTCGCTGGCACTGCCGGTCGGTTTCGAGGC
CCAGGTGCGGCCTCGGTCCGGCTTGGCGGCCAAGAACGGGATTACCGTGG
CCAACGCCCCCGGCACCATCGATGCCGATTATCGCGGCGAAGTAGGCGTG
ATCCTCATCAATCTCAGCCGCGAGCCATTCAAGATCACGCGCGGCATGCG
AATTGCACAACTGGTCATCGCCCGGCATGCCCGGGCAGTCTGGCGGGAAG
TCGGCGAACTCGATCGGACGGCGCGTGGCGTCGGCGGCTTTGGATCAACG
GGTGTTTTGACCGGGGACGGGACG
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