prot_P-wetherbeei_contig58228.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_P-wetherbeei_contig58228.1.1
Unique Name	prot_P-wetherbeei_contig58228.1.1
Type	polypeptide
Organism	Phaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length	120

Homology

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BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: UPI001C3D8EED (cobalamin B12-binding domain-containing protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D8EED)

HSP 1 Score: 194 bits (492), Expect = 9.450e-62
Identity = 96/116 (82.76%), Postives = 106/116 (91.38%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAVPAVR 116
            DRGAKIIARSLRDAGME+IYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRV+DLLR+EGAGDVVV+VGGTIP DDI  L+E+GV AV+TPGAPV  M++FI  +VP  R
Sbjct:   18 DRGAKIIARSLRDAGMEVIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVLDLLRSEGAGDVVVMVGGTIPRDDIEPLREMGVGAVYTPGAPVGEMVEFIERSVPGAR 133

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BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: A0A7K0QQX6_9ACTN (Methylmalonyl-CoA mutase n=4 Tax=root TaxID=1 RepID=A0A7K0QQX6_9ACTN)

HSP 1 Score: 189 bits (480), Expect = 7.240e-60
Identity = 95/112 (84.82%), Postives = 100/112 (89.29%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAV 112
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQI  TV+QEDADAVGLSILSGAHMTLVPR+VDLLRAEG  DVVV VGGTIP DDIP LK LGVA VFTPGAP QG+IDFI  AV
Sbjct:   23 DRGAKIIARALRDAGMEVIYTGLHQTPEQIVETVIQEDADAVGLSILSGAHMTLVPRIVDLLRAEGIDDVVVTVGGTIPADDIPELKALGVAEVFTPGAPTQGIIDFIQGAV 134

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BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: A0A7W0H5G6_9ACTN (Cobalamin B12-binding domain-containing protein n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0H5G6_9ACTN)

HSP 1 Score: 186 bits (472), Expect = 9.260e-59
Identity = 90/113 (79.65%), Postives = 104/113 (92.04%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAVP 113
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQI  TV+QEDADAVGLSILSGAHMTLVPR+  LL++EGA DVV++VGGTIP+DDIP LK+LGV+ VFTPGAPVQG+ID+I  +VP
Sbjct:   19 DRGAKIIARALRDAGMEVIYTGLHQTPEQIVETVLQEDADAVGLSILSGAHMTLVPRIAALLKSEGAEDVVLVVGGTIPNDDIPELKQLGVSEVFTPGAPVQGIIDYIKQSVP 131

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BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: A0A538LE94_9ACTN (Cobalamin B12-binding domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538LE94_9ACTN)

HSP 1 Score: 186 bits (471), Expect = 1.450e-58
Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAV 112
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQIA TV+QEDADAVGLSILSGAHMTLVPRVVDLL+ +GA DVVV VGGTIP DDIP LK+LGVA VFTPGAP Q ++DFI  AV
Sbjct:   23 DRGAKIIARALRDAGMEVIYTGLHQTPEQIAETVIQEDADAVGLSILSGAHMTLVPRVVDLLKQQGAEDVVVTVGGTIPDDDIPELKKLGVAEVFTPGAPTQQIVDFIREAV 134

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BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: UPI0003FA3AEB (cobalamin B12-binding domain-containing protein n=2 Tax=unclassified Solirubrobacter TaxID=2640968 RepID=UPI0003FA3AEB)

HSP 1 Score: 185 bits (470), Expect = 1.990e-58
Identity = 93/112 (83.04%), Postives = 101/112 (90.18%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAV 112
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQI  TV+QEDADAVGLSILSGAHMTLVPRVV+LLR + AGDV+V VGGTIP+ DIP LKELGVAAVFTPGAP Q +IDFI  AV
Sbjct:   21 DRGAKIIARALRDAGMEVIYTGLHQTPEQIVETVLQEDADAVGLSILSGAHMTLVPRVVELLREQDAGDVLVTVGGTIPNQDIPQLKELGVAAVFTPGAPTQDIIDFIKGAV 132

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BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: A0A538CK14_9ACTN (Cobalamin B12-binding domain-containing protein n=3 Tax=Actinobacteria TaxID=201174 RepID=A0A538CK14_9ACTN)

HSP 1 Score: 185 bits (470), Expect = 2.120e-58
Identity = 91/113 (80.53%), Postives = 101/113 (89.38%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAVP 113
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQI  TV+QEDADAVGLSILSGAHMTLVPRVV+LL+ +G  DV+V VGGTIP+DDIP LK+LGVA VFTPGAP Q +IDFI  AVP
Sbjct:   22 DRGAKIIARALRDAGMEVIYTGLHQTPEQIVETVIQEDADAVGLSILSGAHMTLVPRVVELLKQQGIDDVLVTVGGTIPNDDIPQLKQLGVAEVFTPGAPTQAIIDFIQGAVP 134

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BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: A0A2W5Y9F1_9ACTN (Methylmalonyl-CoA mutase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A2W5Y9F1_9ACTN)

HSP 1 Score: 185 bits (469), Expect = 2.830e-58
Identity = 93/114 (81.58%), Postives = 100/114 (87.72%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAVPA 114
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQI ATV+QEDADAVGLSILSGAHMTLVPRVV+LL  + AGDV+V VGGTIP DDIP LK LGVA VFTPGAP Q +IDFI  AV A
Sbjct:   21 DRGAKIIARALRDAGMEVIYTGLHQTPEQIVATVIQEDADAVGLSILSGAHMTLVPRVVELLNEQDAGDVLVTVGGTIPADDIPELKRLGVAEVFTPGAPTQAIIDFIRGAVAA 134

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BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: A0A1H6FHN4_THEAL (Methylmalonyl-CoA mutase, C-terminal domain n=1 Tax=Thermoleophilum album TaxID=29539 RepID=A0A1H6FHN4_THEAL)

HSP 1 Score: 184 bits (466), Expect = 1.360e-57
Identity = 91/117 (77.78%), Postives = 102/117 (87.18%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAVPAVRG 117
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQI  T +QEDADAVGLSILSGAHMTLVP+VV LLR +GA DVVV+VGGTIP DDIP LK+LGVA VFTPG+ VQ ++DFI +AV   RG
Sbjct:   32 DRGAKIIARALRDAGMEVIYTGLHQTPEQIVETAIQEDADAVGLSILSGAHMTLVPKVVRLLREQGADDVVVVVGGTIPKDDIPELKKLGVAEVFTPGSSVQAIVDFIRSAVAEARG 148

[Close]

BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: UPI001B19DC9F (Cobalamin B12-binding domain-containing protein n=1 Tax=Solirubrobacteraceae bacterium TaxID=2586742 RepID=UPI001B19DC9F)

HSP 1 Score: 183 bits (464), Expect = 1.740e-57
Identity = 90/112 (80.36%), Postives = 101/112 (90.18%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAV 112
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQI  TV+QEDADAVGLSILSGAHMTLVP++V+LL+ EGA DV+V VGGTIP DDIP LK+LGVA VFTPG+P Q +IDFIN AV
Sbjct:   22 DRGAKIIARALRDAGMEVIYTGLHQTPEQIVETVLQEDADAVGLSILSGAHMTLVPKIVELLKEEGADDVLVTVGGTIPGDDIPELKQLGVAEVFTPGSPTQDIIDFINGAV 133

[Close]

BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Match: A0A5B8U4A4_9ACTN (Cobalamin B12-binding domain-containing protein n=2 Tax=Actinobacteria TaxID=201174 RepID=A0A5B8U4A4_9ACTN)

HSP 1 Score: 182 bits (461), Expect = 6.660e-57
Identity = 92/119 (77.31%), Postives = 101/119 (84.87%), Query Frame = 0

Query:    1 DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGAHMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAPVQGMIDFINAAVPAVRGEG 119
            DRGAKIIAR+LRDAGME+IYTGLHQTPEQI  TV+QEDADAVGLSILSGAHMTLVPR+V LL  +G  DV+V VGGTIP DDI  LKELGVA VFTPGAP Q +IDFI +AV A R +G
Sbjct:   23 DRGAKIIARALRDAGMEVIYTGLHQTPEQIVETVIQEDADAVGLSILSGAHMTLVPRIVQLLSEQGIDDVLVTVGGTIPADDIGPLKELGVAEVFTPGAPTQAIIDFIRSAVEASRVDG 141

The following BLAST results are available for this feature:

BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot

BLAST of mRNA_P-wetherbeei_contig58228.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001C3D8EED	9.450e-62	82.76	cobalamin B12-binding domain-containing protein n=...	[more]
A0A7K0QQX6_9ACTN	7.240e-60	84.82	Methylmalonyl-CoA mutase n=4 Tax=root TaxID=1 RepI...	[more]
A0A7W0H5G6_9ACTN	9.260e-59	79.65	Cobalamin B12-binding domain-containing protein n=...	[more]
A0A538LE94_9ACTN	1.450e-58	83.04	Cobalamin B12-binding domain-containing protein n=...	[more]
UPI0003FA3AEB	1.990e-58	83.04	cobalamin B12-binding domain-containing protein n=...	[more]
A0A538CK14_9ACTN	2.120e-58	80.53	Cobalamin B12-binding domain-containing protein n=...	[more]
A0A2W5Y9F1_9ACTN	2.830e-58	81.58	Methylmalonyl-CoA mutase n=1 Tax=Solirubrobacteral...	[more]
A0A1H6FHN4_THEAL	1.360e-57	77.78	Methylmalonyl-CoA mutase, C-terminal domain n=1 Ta...	[more]
UPI001B19DC9F	1.740e-57	80.36	Cobalamin B12-binding domain-containing protein n=...	[more]
A0A5B8U4A4_9ACTN	6.660e-57	77.31	Cobalamin B12-binding domain-containing protein n=...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006158	Cobalamin (vitamin B12)-binding domain	PFAM	PF02310	B12-binding	coord: 1..98 e-value: 3.6E-19 score: 69.0
IPR006158	Cobalamin (vitamin B12)-binding domain	PROSITE	PS51332	B12_BINDING	coord: 1..118 score: 33.880291
IPR006159	Methylmalonyl-CoA mutase, C-terminal	TIGRFAM	TIGR00640	TIGR00640	coord: 1..114 e-value: 2.0E-42 score: 142.3
None	No IPR available	GENE3D	3.40.50.280		coord: 1..118 e-value: 4.5E-49 score: 167.7
None	No IPR available	PANTHER	PTHR48101:SF1	GLUTAMATE MUTASE SIGMA SUBUNIT	coord: 1..117
None	No IPR available	PANTHER	PTHR48101	METHYLMALONYL-COA MUTASE, MITOCHONDRIAL-RELATED	coord: 1..117
None	No IPR available	CDD	cd02071	MM_CoA_mut_B12_BD	coord: 1..108 e-value: 6.13384E-52 score: 157.754
IPR036724	Cobalamin-binding domain superfamily	SUPERFAMILY	52242	Cobalamin (vitamin B12)-binding domain	coord: 1..108

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
P-wetherbeei_contig58228	contig	P-wetherbeei_contig58228:145..504 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.0	2022-07-08

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_P-wetherbeei_contig58228.1.1	mRNA_P-wetherbeei_contig58228.1.1	Phaeothamnion wetherbeei SAG_119_79	mRNA	P-wetherbeei_contig58228 145..504 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_P-wetherbeei_contig58228.1.1 ID=prot_P-wetherbeei_contig58228.1.1|Name=mRNA_P-wetherbeei_contig58228.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp
DRGAKIIARSLRDAGMEIIYTGLHQTPEQIAATVVQEDADAVGLSILSGA
HMTLVPRVVDLLRAEGAGDVVVIVGGTIPHDDIPTLKELGVAAVFTPGAP
VQGMIDFINAAVPAVRGEG*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR006158	Cobalamin-bd
IPR006159	Acid_CoA_mut_C
IPR036724	Cobalamin-bd_sf