mRNA_P-wetherbeei_contig58215.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58215.1.1
Unique NamemRNA_P-wetherbeei_contig58215.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A6G6WXI4_9HYPH (Type 1 glutamine amidotransferase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A6G6WXI4_9HYPH)

HSP 1 Score: 219 bits (558), Expect = 2.620e-70
Identity = 95/119 (79.83%), Postives = 107/119 (89.92%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTE 357
            M++LVFQH+AVEHP +LR+FLK DGI WD VELDEG  IP   AYD LWVMGGPMDVWDV+E+PWL+PEKRAIR WVRDLK+PFLG+CLGHQLLADA+GGTCGPQRPPEVGILD+ LTE
Sbjct:    1 MKLLVFQHLAVEHPAVLREFLKEDGIVWDAVELDEGGVIPPLEAYDMLWVMGGPMDVWDVEEHPWLIPEKRAIRTWVRDLKRPFLGVCLGHQLLADALGGTCGPQRPPEVGILDIELTE 119          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A7X4BZJ2_9PROT (Type 1 glutamine amidotransferase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7X4BZJ2_9PROT)

HSP 1 Score: 217 bits (552), Expect = 1.820e-69
Identity = 92/120 (76.67%), Postives = 106/120 (88.33%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTEE 360
            MR+LVFQHV  EHPG LR FL  DG+ WD VELDEG+PIPD   YDALWVMGGPMDVWD+++NPWLVPEK AIR+WVR+LK+PFLGICLGHQLLADA+GGTCGPQ PPE+G++D+ LTEE
Sbjct:    1 MRLLVFQHVESEHPGSLRQFLARDGVHWDAVELDEGEPIPDLDGYDALWVMGGPMDVWDIEDNPWLVPEKAAIRRWVRELKRPFLGICLGHQLLADALGGTCGPQAPPEIGVMDIELTEE 120          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: F8JA74_HYPSM (GMP synthase-glutamine amidotransferase domain-protein n=1 Tax=Hyphomicrobium sp. (strain MC1) TaxID=717785 RepID=F8JA74_HYPSM)

HSP 1 Score: 213 bits (542), Expect = 6.210e-68
Identity = 95/120 (79.17%), Postives = 104/120 (86.67%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTEE 360
            MR LVFQH+A EHPGI R F  ADGIAWD VELDEG  IP    YDALWVMGGPMDVWDVDE PWLV EKRAIR+WVR+L+KPF+G+CLGHQLLADA+GGTCGPQRPPE+GILDV+LT E
Sbjct:    1 MRFLVFQHIACEHPGIFRKFFAADGIAWDAVELDEGAAIPALENYDALWVMGGPMDVWDVDECPWLVDEKRAIRRWVRELEKPFMGLCLGHQLLADALGGTCGPQRPPEIGILDVALTTE 120          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A433A436_HYPSQ (Type 1 glutamine amidotransferase n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=A0A433A436_HYPSQ)

HSP 1 Score: 213 bits (542), Expect = 6.210e-68
Identity = 94/119 (78.99%), Postives = 104/119 (87.39%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTE 357
            MR LVFQHVA EHPGI R F  ADGIAWD +ELDEG+ IPD   YDALWVMGGPMDVWDV+E PWLV EKRAIR+WVRDL+KPF+G+CLGHQLLADA+GGTCGPQRPPE+GILDV  T+
Sbjct:    1 MRFLVFQHVACEHPGIFRRFFAADGIAWDAIELDEGESIPDLDRYDALWVMGGPMDVWDVEECPWLVDEKRAIRRWVRDLQKPFMGLCLGHQLLADALGGTCGPQRPPEIGILDVMATD 119          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A7W0XKD4_9HYPH (Type 1 glutamine amidotransferase n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A7W0XKD4_9HYPH)

HSP 1 Score: 211 bits (538), Expect = 2.440e-67
Identity = 91/120 (75.83%), Postives = 106/120 (88.33%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTEE 360
            MR+LVFQH+A EHPGILR FL  DG+AWD VELD G+PIP    YDALWVMGGPMDVWDV+E+PWLV EK+AIR+WVR+L +PFLG+CLGHQLLADA+GGTCGPQ PPE+GIL+V LT+E
Sbjct:    1 MRLLVFQHIACEHPGILRSFLAEDGVAWDAVELDAGEPIPALEKYDALWVMGGPMDVWDVEEHPWLVEEKQAIRRWVRELDRPFLGLCLGHQLLADALGGTCGPQHPPEIGILNVELTQE 120          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A366WTU1_9RHOB (Type 1 glutamine amidotransferase n=1 Tax=Ruegeria sp. A3M17 TaxID=2267229 RepID=A0A366WTU1_9RHOB)

HSP 1 Score: 211 bits (537), Expect = 3.570e-67
Identity = 94/120 (78.33%), Postives = 102/120 (85.00%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTEE 360
            MR+LVFQHV  EHPG LR FL  D IAWD VELDEG+PIPD   YDALWVMGGPMDVWDV ENPWL+ EK AIR WVRD+KKPFLG+CLGHQLLADA+GGTCGPQRP E+G+LDV LT E
Sbjct:    1 MRLLVFQHVDCEHPGSLRRFLARDSIAWDAVELDEGEPIPDLNNYDALWVMGGPMDVWDVHENPWLILEKAAIRTWVRDMKKPFLGLCLGHQLLADALGGTCGPQRPSEIGVLDVELTAE 120          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A537PA96_9PROT (Type 1 glutamine amidotransferase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PA96_9PROT)

HSP 1 Score: 210 bits (535), Expect = 8.150e-67
Identity = 91/119 (76.47%), Postives = 106/119 (89.08%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTE 357
            M++LVFQH+A EHP +LR+FLK DGI+WD V LDEGQ IP   +YD LWVMGGPMDVWDV+E+PWLV EKRAIR+WVRDLK+PFLG+CLGHQLLADA+ GTCGPQRPPEVGILD+ LT+
Sbjct:    1 MKLLVFQHLACEHPAVLRNFLKEDGISWDTVALDEGQAIPALESYDMLWVMGGPMDVWDVEEHPWLVAEKRAIRRWVRDLKRPFLGVCLGHQLLADALNGTCGPQRPPEVGILDILLTD 119          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A0C1H3T7_9RHOB (Glutamine amidotransferase n=1 Tax=Leisingera sp. ANG-M1 TaxID=1577895 RepID=A0A0C1H3T7_9RHOB)

HSP 1 Score: 209 bits (531), Expect = 2.910e-66
Identity = 91/119 (76.47%), Postives = 103/119 (86.55%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTE 357
            MR+LVFQHVA EHPG LR FL+ DGI WD +ELDEG+ IP    YDALWVMGGPMDVWDV+E+PWL+ EK AIR WVRDLKKP+LG+CLGHQLLADA+GGTCGPQRP E+G+LDV LTE
Sbjct:    1 MRLLVFQHVACEHPGSLRRFLERDGIEWDAIELDEGEQIPGLAGYDALWVMGGPMDVWDVEEHPWLIAEKAAIRTWVRDLKKPYLGLCLGHQLLADALGGTCGPQRPAEIGVLDVELTE 119          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A6N9EX94_9ACTN (Type 1 glutamine amidotransferase n=8 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9EX94_9ACTN)

HSP 1 Score: 208 bits (529), Expect = 6.430e-66
Identity = 90/120 (75.00%), Postives = 103/120 (85.83%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTEE 360
            MR+LV QH+  EHPG LRDFL  DGI W  VELDEG+PIP    +DA+WVMGGPMDVWDV+E+PWLVPEKRAIR WVR+L+KPFLG+CLGHQLLADA+GGTCGPQRPPE+G+L V LT E
Sbjct:    1 MRLLVLQHIDCEHPGRLRDFLADDGIEWTAVELDEGEPIPPLEDFDAMWVMGGPMDVWDVEEHPWLVPEKRAIRHWVRELQKPFLGVCLGHQLLADALGGTCGPQRPPEIGVLGVELTPE 120          
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Match: A0A6B1GAZ8_9ACTN (Type 1 glutamine amidotransferase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A6B1GAZ8_9ACTN)

HSP 1 Score: 207 bits (526), Expect = 1.670e-65
Identity = 88/120 (73.33%), Postives = 105/120 (87.50%), Query Frame = 1
Query:    1 MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWVMGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGGTCGPQRPPEVGILDVSLTEE 360
            MR+LV QH+  EHPG LRDFL+ADG+ W  VELDEG+PIP    +DA+WVMGGPMDVWDV++ PWLVPEKRAIR+WVR+L++PFLG+CLGHQLLADA+GGTCGPQRPPE+G+L V LT E
Sbjct:    1 MRLLVLQHIDCEHPGRLRDFLRADGVEWTAVELDEGEPIPPLEDFDAMWVMGGPMDVWDVEDCPWLVPEKRAIRRWVRELQRPFLGLCLGHQLLADALGGTCGPQRPPEIGVLAVDLTPE 120          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58215.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6G6WXI4_9HYPH2.620e-7079.83Type 1 glutamine amidotransferase n=2 Tax=Hyphomic... [more]
A0A7X4BZJ2_9PROT1.820e-6976.67Type 1 glutamine amidotransferase n=1 Tax=Alphapro... [more]
F8JA74_HYPSM6.210e-6879.17GMP synthase-glutamine amidotransferase domain-pro... [more]
A0A433A436_HYPSQ6.210e-6878.99Type 1 glutamine amidotransferase n=1 Tax=Hyphomic... [more]
A0A7W0XKD4_9HYPH2.440e-6775.83Type 1 glutamine amidotransferase n=1 Tax=Hyphomic... [more]
A0A366WTU1_9RHOB3.570e-6778.33Type 1 glutamine amidotransferase n=1 Tax=Ruegeria... [more]
A0A537PA96_9PROT8.150e-6776.47Type 1 glutamine amidotransferase n=2 Tax=Alphapro... [more]
A0A0C1H3T7_9RHOB2.910e-6676.47Glutamine amidotransferase n=1 Tax=Leisingera sp. ... [more]
A0A6N9EX94_9ACTN6.430e-6675.00Type 1 glutamine amidotransferase n=8 Tax=Acidimic... [more]
A0A6B1GAZ8_9ACTN1.670e-6573.33Type 1 glutamine amidotransferase n=1 Tax=Acidimic... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58215contigP-wetherbeei_contig58215:145..504 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog717785.HYPMC_4288
PFAMsGATase
Model size360
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.02e-68
EggNOG OGsCOG0518@1|root,COG0518@2|Bacteria,1MUDH@1224|Proteobacteria,2TU60@28211|Alphaproteobacteria,3N7EG@45401|Hyphomicrobiaceae
DescriptionGlutamine amidotransferase class-I
Cds size360
COG categoryF
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186862.6159008-CDS-P-wetherbeei_contig58215:144..5041683186862.6159008-CDS-P-wetherbeei_contig58215:144..504Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58215 145..504 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58215.1.1prot_P-wetherbeei_contig58215.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58215 145..504 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58215.1.1

>prot_P-wetherbeei_contig58215.1.1 ID=prot_P-wetherbeei_contig58215.1.1|Name=mRNA_P-wetherbeei_contig58215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=120bp
MRVLVFQHVAVEHPGILRDFLKADGIAWDPVELDEGQPIPDFRAYDALWV
MGGPMDVWDVDENPWLVPEKRAIRQWVRDLKKPFLGICLGHQLLADAMGG
TCGPQRPPEVGILDVSLTEE
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mRNA from alignment at P-wetherbeei_contig58215:145..504+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58215.1.1 ID=mRNA_P-wetherbeei_contig58215.1.1|Name=mRNA_P-wetherbeei_contig58215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig58215:145..504+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGTTCTCGTCTTCCAGCACGTCGCCGTCGAACATCCCGGTATCCT GCGCGATTTCCTGAAAGCGGACGGCATCGCCTGGGACCCGGTCGAGCTGG ACGAAGGCCAGCCGATCCCGGATTTCCGCGCCTATGACGCCTTGTGGGTC ATGGGCGGACCGATGGATGTCTGGGACGTGGACGAGAATCCCTGGCTGGT CCCGGAAAAGCGCGCCATCCGCCAGTGGGTGCGCGATCTGAAGAAGCCGT TCCTCGGCATCTGCCTGGGCCACCAATTGCTGGCCGACGCGATGGGCGGC ACCTGTGGACCGCAGCGACCGCCGGAAGTCGGCATCCTCGACGTGTCGCT GACCGAAGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58215:145..504+

>mRNA_P-wetherbeei_contig58215.1.1 ID=mRNA_P-wetherbeei_contig58215.1.1|Name=mRNA_P-wetherbeei_contig58215.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=360bp|location=Sequence derived from alignment at P-wetherbeei_contig58215:145..504+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGTTCTCGTCTTCCAGCACGTCGCCGTCGAACATCCCGGTATCCT
GCGCGATTTCCTGAAAGCGGACGGCATCGCCTGGGACCCGGTCGAGCTGG
ACGAAGGCCAGCCGATCCCGGATTTCCGCGCCTATGACGCCTTGTGGGTC
ATGGGCGGACCGATGGATGTCTGGGACGTGGACGAGAATCCCTGGCTGGT
CCCGGAAAAGCGCGCCATCCGCCAGTGGGTGCGCGATCTGAAGAAGCCGT
TCCTCGGCATCTGCCTGGGCCACCAATTGCTGGCCGACGCGATGGGCGGC
ACCTGTGGACCGCAGCGACCGCCGGAAGTCGGCATCCTCGACGTGTCGCT
GACCGAAGAG
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