prot_P-wetherbeei_contig582.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig582.2.1
Unique Nameprot_P-wetherbeei_contig582.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length945
Homology
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BLAST of mRNA_P-wetherbeei_contig582.2.1 vs. uniprot
Match: A0A6H5KJY1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJY1_9PHAE)

HSP 1 Score: 61.6 bits (148), Expect = 7.760e-6
Identity = 46/135 (34.07%), Postives = 66/135 (48.89%), Query Frame = 0 
Query:   40 KRLIVLNSREKPGVSAKSGVVAPVPFNTPSLRKETAGLDADYGGCGPPAGAKFGWQSAEADPAAATVAFNGGGGGPRGTVRANGSGPAGAASDATRGLEGRGPAAGRGTRGGDEIFSRHFPELSAAREQEERAKA 174
            KR +++ +++     AK+GVVAPVP NTPSLR+E  G +A        +G+  GW SA    A+A  A                      A  +     G+G   G G + GD++F+RHFP+L A  EQ E+  A
Sbjct:   16 KRYMMVGTKDALPAGAKTGVVAPVPINTPSLRQEIQGENAGTAAINR-SGSGGGWGSAVVSSASANSA----------------------AGQSVASGNGKGRRDGSGRQRGDDVFTRHFPDLRAGLEQAEKLDA 127
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig582.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KJY1_9PHAE7.760e-634.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 162..182
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 512..527
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 105..154
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 680..783
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 167..190
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..55
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 312..440
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 821..882
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 319..333
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 557..577
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 456..642
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 930..944
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 895..944
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 246..280

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig582contigP-wetherbeei_contig582:6222..9302 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig582.2.1mRNA_P-wetherbeei_contig582.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig582 6058..9507 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig582.2.1 ID=prot_P-wetherbeei_contig582.2.1|Name=mRNA_P-wetherbeei_contig582.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=945bp
MSRPYTSRNLNASRPQPAAGGGRGSNGGAPGGAGSTRDPKRLIVLNSREK
PGVSAKSGVVAPVPFNTPSLRKETAGLDADYGGCGPPAGAKFGWQSAEAD
PAAATVAFNGGGGGPRGTVRANGSGPAGAASDATRGLEGRGPAAGRGTRG
GDEIFSRHFPELSAAREQEERAKAAAKAAARAGPKPAPRGAAVKKAVVKV
PLQQLQQPGVGVGVAPLGSSPAAGAAAAAAAPLAAVTAPSLGSGTSKDAV
DGGGGGGGTAAPGAGGLRPRGGLRPGASSAVMLGPPSGAAASAAEDKARA
AAAAAATSAANAARYEHTPGPSFEEEMQRRSRRGTRGAAVAPGVLTGAPG
GGGGSGGGGSGGGGGISSPGGGSGGGGAGGSSGGGNSGGRFGSGCGGEVD
PQPSRVGALTEPRDGYARRNGGDRGGDGANGDYGRSRASPLPAVVAASPA
LTYQRQYGPPPRLIGAAAGTASPSPAPVPSEPQQQHSGGGSGSRGDWSPP
HARLAPSAQTLRHGSGRDTSAGTNGFAKQSERGAGGYDSTAWRSGNGGAS
GLPGRRSPSPPQGQGQQQQQPLSAQPDAYRHSGTRRDGGGAGGCGDGLSV
VTGAGRSSRWGSAASPPSAGAVERDAFSLLASQKSPPWSAAGDVPDVFAT
VGVPQPQQPYSAFDAAGLNGSAALVAGDDWGASPAAGGSGGGAGRVGRTG
RGASPATVDGGSGSNKISTILGGAAAVPPPVAADGGTWDPRLSFERRPGY
TQAFSQSPSSGAMPAGADPPPLPSGLSHWDGGVDVDGCDVGVSGDGGGGV
DDGDDGVAGATALFAPGRLKGDRYVLPARRQQQDSPPQPPPGMGQTSPAL
GLATQQPPLATMPTPPLPSPASPLMGGDGGFGSFGQAIMAPMPASFSALP
PPPSLGGSGGSGVPLAMPPGVPPPTVDPHSAFATSPQYAYHASS*
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