mRNA_P-wetherbeei_contig581.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: D7FS22_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FS22_ECTSI) HSP 1 Score: 92.4 bits (228), Expect = 1.050e-19 Identity = 50/96 (52.08%), Postives = 66/96 (68.75%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHKSDHLAIVEAFNAWRNRKTGNGGGGVGDGELWEWCRENFLSFSVLDT 288
LL++A + LDP+LT+AAAL+ K+PF PFG+ AR A+ +RQ FAQ KSDHLAIVEAF AWRN++ + E+ WCRE FLS L++
Sbjct: 1121 LLLIAAILQCLDPILTIAAALSDKAPFQRPFGEQAR--ADKARQGFAQGKSDHLAIVEAFGAWRNKRRTSS-----YDEVRRWCREKFLSQPTLES 1209
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: F1A427_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A427_DICPU) HSP 1 Score: 80.1 bits (196), Expect = 2.210e-15 Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHKSDHLAIVEAFNAWRNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
+L+ C+F +DP+LT+AA L+ KSPF+ P R Q+FA H+SDHL V A+N WR + DG +++C++N+LS S L T++ L+
Sbjct: 1100 MLLFGCIFRCIDPMLTIAATLSSKSPFLNPSDKKIRP-----HQKFASHQSDHLMFVNAYNQWRKA--------IADGNEYQFCKDNYLSISTLRTIQDLK 1187
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: A0A7S3XX33_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XX33_HETAK) HSP 1 Score: 77.4 bits (189), Expect = 1.260e-14 Identity = 43/101 (42.57%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHKSDHLAIVEAFNAWRNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
LL+ C+F LDPVL++AAAL HKSP V+PF + A A + F+ KSDHLA+V A+ WR +K G+ E+ +C + FLS L+ + LR
Sbjct: 46 LLLWGCIFQCLDPVLSIAAALCHKSPLVSPFNKQ-QEATAAREEYFSDLKSDHLAVVRAYEGWRKKKR------EGNKEVRSFCDKRFLSSKSLEMIHALR 139
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: A0A2I4GGX5_JUGRE (RNA helicase n=15 Tax=Juglandaceae TaxID=16714 RepID=A0A2I4GGX5_JUGRE) HSP 1 Score: 75.1 bits (183), Expect = 1.260e-13 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHKSDHLAIVEAFNAWRNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
+LI+ +FN LDPVLT+ A L+ + PF+TPF + AEA++ +F++ SDHLA+V A+ W++ + N G +E+C NFLS + ++ LR
Sbjct: 808 MLILGAIFNCLDPVLTIVAGLSVRDPFLTPFDK--KDLAEAAKSQFSRDYSDHLALVRAYEGWKDAEIDNSG--------YEYCWRNFLSVQSMKAIDSLR 898
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: UPI001E1DCC6E (putative ATP-dependent RNA helicase DHX57 n=1 Tax=Mercenaria mercenaria TaxID=6596 RepID=UPI001E1DCC6E) HSP 1 Score: 74.3 bits (181), Expect = 2.360e-13 Identity = 39/101 (38.61%), Postives = 60/101 (59.41%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHKSDHLAIVEAFNAWRNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
L+++ +F LDP LT+AA L+ KSPFVTPFG + A R FA SDHL ++ A+NAW+ + +G E + +C++NFLS L+ + ++
Sbjct: 1076 LMLLGAIFRCLDPALTIAACLSFKSPFVTPFGK--KHEATEKRLEFAAGNSDHLTMLNAYNAWKEARKNSGH------EAYRFCQDNFLSKRSLEMLSSMK 1168
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: C1E1I8_MICCC (RNA helicase n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E1I8_MICCC) HSP 1 Score: 73.9 bits (180), Expect = 3.180e-13 Identity = 44/103 (42.72%), Postives = 61/103 (59.22%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFA-QHKSDHLAIVEAFNAW-RNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
+L+ A F L P LT+AA +A+K PFV P + A+A R+R A +SDH+A+V AF W R R+ G G+ E WE+CR NFLS + L+ M +R
Sbjct: 644 MLVTAATFGCLSPALTIAAGMAYKDPFVLPMDK--KHQADAVRRRLAGDTRSDHIALVRAFEGWTRARRDG------GNREGWEYCRRNFLSGNTLELMSDMR 738
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: I1C765_RHIO9 (Uncharacterized protein n=1 Tax=Rhizopus delemar (strain RA 99-880 / ATCC MYA-4621 / FGSC 9543 / NRRL 43880) TaxID=246409 RepID=I1C765_RHIO9) HSP 1 Score: 72.8 bits (177), Expect = 8.180e-13 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 19 LFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHKSDHLAIVEAFNAWRNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
+F LDP+LT+AAAL+ KSPFV PFG A+ +R RF + SD L + +A+ WR+ G ++ E+C+EN+LS L+T+E+++
Sbjct: 1131 IFRCLDPILTIAAALSFKSPFVRPFGKE--DEADRARARFECNNSDFLTVYQAYEIWRDELMSVRGKPGWIRKMHEFCKENYLSHQNLETIEEMK 1223
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: A0A835Z4K1_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z4K1_9STRA) HSP 1 Score: 72.4 bits (176), Expect = 1.100e-12 Identity = 46/104 (44.23%), Postives = 63/104 (60.58%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHK-SDHLAIVEAFNAW--RNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
LLI+ L LDPVLTVAAAL+ K+PFV P G +A +AA R+RFA SD LA+V A+ AW R+ + G ++W CR+NF++ + + M LR
Sbjct: 690 LLIMGALLRCLDPVLTVAAALSSKTPFVRPMGSAAEAAATDVRKRFAGGNCSDSLAVVAAYKAWDAECRRVNSSSGTCPRMKMW--CRDNFINSNAMALMAGLR 791
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: A0A3S3PVW4_9MAGN (RNA helicase n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A3S3PVW4_9MAGN) HSP 1 Score: 72.0 bits (175), Expect = 1.510e-12 Identity = 41/102 (40.20%), Postives = 61/102 (59.80%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHK-SDHLAIVEAFNAWRNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
+L++ C+F LDP LT+A+ALAH+ PFV P + A+A ++ FA SDH+A+++AF AW++ K +G +C ENFLS L ME +R
Sbjct: 769 MLLMGCIFQCLDPALTIASALAHRDPFVLPINK--KEEADAVKRSFAGDSCSDHIALLKAFEAWKDAKR--------NGRERSFCWENFLSPVTLQMMEDMR 860
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Match: A0A1S2Y1H0_CICAR (RNA helicase n=5 Tax=IRL clade TaxID=2233839 RepID=A0A1S2Y1H0_CICAR) HSP 1 Score: 72.0 bits (175), Expect = 1.520e-12 Identity = 38/101 (37.62%), Postives = 62/101 (61.39%), Query Frame = 1
Query: 1 LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHKSDHLAIVEAFNAWRNRKTGNGGGGVGDGELWEWCRENFLSFSVLDTMEQLR 303
+LI+ +FN LDP+LTV A L+ + PF+TP + AEA++ +F+ SDHLA+V A+ W++ + GG +++C +NFLSF + ++ LR
Sbjct: 780 MLILGAIFNCLDPILTVVAGLSVRDPFLTPLDK--KDLAEAAKSQFSGAYSDHLALVRAYEGWKDAEVDLGG--------YDYCWKNFLSFQSMKAIDALR 870 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig581.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig581.4.1 >prot_P-wetherbeei_contig581.4.1 ID=prot_P-wetherbeei_contig581.4.1|Name=mRNA_P-wetherbeei_contig581.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=101bp LLIVACLFNVLDPVLTVAAALAHKSPFVTPFGDSARSAAEASRQRFAQHKback to top mRNA from alignment at P-wetherbeei_contig581:8613..8915- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig581.4.1 ID=mRNA_P-wetherbeei_contig581.4.1|Name=mRNA_P-wetherbeei_contig581.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig581:8613..8915- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig581:8613..8915- >mRNA_P-wetherbeei_contig581.4.1 ID=mRNA_P-wetherbeei_contig581.4.1|Name=mRNA_P-wetherbeei_contig581.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=303bp|location=Sequence derived from alignment at P-wetherbeei_contig581:8613..8915- (Phaeothamnion wetherbeei SAG_119_79)back to top |