mRNA_P-wetherbeei_contig5807.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: A0A7S2V252_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V252_9STRA) HSP 1 Score: 351 bits (901), Expect = 3.520e-121 Identity = 184/213 (86.38%), Postives = 198/213 (92.96%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAGNAGPNITQGETIALSAGGEGPGG-AKAKSSCCK 645
DD+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGK IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR VSTEEAMAFAE++NLAFIETSALDASGVDTAFQRILTEIYRLMSR+++ AG I++GETI+L+A +G G + +KS+CCK
Sbjct: 6 DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKIIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVSTEEAMAFAEKNNLAFIETSALDASGVDTAFQRILTEIYRLMSRRSVLAGGNDAVISRGETISLAAT-QGDGSRSSSKSNCCK 217
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: D8LQC1_ECTSI (Rab11A, RAB family GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LQC1_ECTSI) HSP 1 Score: 350 bits (898), Expect = 1.040e-120 Identity = 182/211 (86.26%), Postives = 198/211 (93.84%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAGNA-GPNITQGETIALSAGGEGPGGAKAKSSC 639
+D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVML+GNKSDLRHLRTV+ EEAM FA++HNLAF+ETSALDASGVD+AFQRILTEIYRLMSRKTIAA A GP++++GETIALS+ + ++KSSC
Sbjct: 5 EDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLIGNKSDLRHLRTVTHEEAMEFAKKHNLAFLETSALDASGVDSAFQRILTEIYRLMSRKTIAANTATGPDLSRGETIALSSARD-DASNRSKSSC 214
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: A0A6V0CK96_9STRA (Hypothetical protein n=8 Tax=Bacillariophyta TaxID=2836 RepID=A0A6V0CK96_9STRA) HSP 1 Score: 348 bits (892), Expect = 8.260e-120 Identity = 180/214 (84.11%), Postives = 193/214 (90.19%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAGNA---GPNITQGETIALSAGGEGPGGAKAKSSCC 642
D++YDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR V T+EAM+F+EQHNLAFIETSALDASGVDTAFQRILTEIYRLMSR+ +AA A GP++T G++I+L GG G K CC
Sbjct: 6 DEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMSFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNVAAEEANAGGPSLTAGQSISLG-GGNNNAGQGEKKGCC 218
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: B5YND5_THAPS (Rab-type small GTPase n=3 Tax=Thalassiosira TaxID=35127 RepID=B5YND5_THAPS) HSP 1 Score: 342 bits (876), Expect = 2.040e-117 Identity = 175/198 (88.38%), Postives = 186/198 (93.94%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAA--GNAGPNITQGETIALSA 597
D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ EGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR V T+EAMAF+EQHNLAFIETSALDASGVDTAFQRILTEIYRLMSR+ +AA G P ++ G+TI+L+A
Sbjct: 6 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMAAEDGANAPQLSSGQTISLNA 203
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: A0A836CE16_9STRA (Rab11A, rab family GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CE16_9STRA) HSP 1 Score: 340 bits (873), Expect = 7.190e-117 Identity = 175/212 (82.55%), Postives = 192/212 (90.57%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAGNAGPN--ITQGETIALSAGGEGPGGAKAKSSC 639
D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQ E K IKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH+TFENVERWLKELRDHAEANIVVMLVGNK DLRHLRTVS EEA FAE++ LAFIETSALDASGVDTAFQRILTEIYRLM++K ++AG + P + QGETIALS+G G+++K++C
Sbjct: 5 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTENKVIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHITFENVERWLKELRDHAEANIVVMLVGNKCDLRHLRTVSVEEATEFAEKNKLAFIETSALDASGVDTAFQRILTEIYRLMNKKQMSAGGSSPTPALGQGETIALSSGATDKAGSRSKTAC 216
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: B7GDZ3_PHATC (Predicted protein n=5 Tax=Bacillariophyta TaxID=2836 RepID=B7GDZ3_PHATC) HSP 1 Score: 338 bits (866), Expect = 6.560e-116 Identity = 177/212 (83.49%), Postives = 188/212 (88.68%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAG-NAGPNITQGETIALSAGGEGPGGAKAKSSCC 642
D++YDYLFK+VLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR V T+EAMAF+EQHNLAFIETSALDASGVDTAFQRILTEIYRLMSR+ + A NA ++ G I+LS G+ K CC
Sbjct: 6 DEEYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHGTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMAFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNMQAEENANAPMSAGHKISLSQSGD------KKKGCC 211
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: A0A7S0C1Y2_9STRA (Hypothetical protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C1Y2_9STRA) HSP 1 Score: 335 bits (859), Expect = 2.250e-114 Identity = 171/190 (90.00%), Postives = 178/190 (93.68%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAGNAGPNITQGE 579
D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH TFENVERWLKELRDHAEANIVVMLVGNKSDLRHLR V T+EAM+F+EQHNLAFIETSALDASGVDTAFQRILTEIYRLMSR+ I A A T G+
Sbjct: 35 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHSTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRAVETDEAMSFSEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRRNIQAEEAANATTLGD 224
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: A0A024TRU3_9STRA (Uncharacterized protein n=11 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024TRU3_9STRA) HSP 1 Score: 334 bits (856), Expect = 2.790e-114 Identity = 172/215 (80.00%), Postives = 189/215 (87.91%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAGNAGPNITQGETIALSAGGEGPG----GAKAKSSCC 642
D++YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KH TFENVERWLKELRDHA+AN V+MLVGNKSDLRHLR V TEEAMAFAE+HNLAF+ETSALDA+GVDTAFQRILTEIY LMSRKT+ A ++ QG I +++ G+K KS+CC
Sbjct: 7 DEEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHPTFENVERWLKELRDHADANTVIMLVGNKSDLRHLRAVQTEEAMAFAEKHNLAFLETSALDATGVDTAFQRILTEIYNLMSRKTMQAEEHSASLPQGNKIEINSDNAPTAAAAKGSKKKSACC 221
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: A0A024GTW1_9STRA (Uncharacterized protein n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024GTW1_9STRA) HSP 1 Score: 330 bits (845), Expect = 1.110e-112 Identity = 169/211 (80.09%), Postives = 188/211 (89.10%), Query Frame = 1
Query: 10 DDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAGNAGPNITQGETIALSAGGEGPGGAKAKSSCC 642
+D YDYLFK+VLIGDSGVGKSNLLSRFTRNEF+LESKSTIGVEFATKSI AEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDI+KHVTFENVERWLKELR+HA+AN V+MLVGNKSDLRHLR V TEEAMAFAE++NLAFIETSAL+A GVD+AFQRILTEIY+LMSRKTI A + ++ G+ I +++ G K KSSCC
Sbjct: 6 EDDYDYLFKIVLIGDSGVGKSNLLSRFTRNEFHLESKSTIGVEFATKSIVAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKHVTFENVERWLKELREHADANTVIMLVGNKSDLRHLRAVPTEEAMAFAEKNNLAFIETSALEAIGVDSAFQRILTEIYKLMSRKTIQAEESQISLPSGDNIVITSDKTEEGVKKKKSSCC 216
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Match: A0A2R5G9J5_9STRA (Ras-related protein Rab-11A n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G9J5_9STRA) HSP 1 Score: 324 bits (831), Expect = 1.400e-110 Identity = 163/198 (82.32%), Postives = 184/198 (92.93%), Query Frame = 1
Query: 1 MSHDDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQAEGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEANIVVMLVGNKSDLRHLRTVSTEEAMAFAEQHNLAFIETSALDASGVDTAFQRILTEIYRLMSRKTIAAG--NAGPNITQGETIA 588
+ +D+YDYLFKVVLIGDSGVGKSNLLSRFTRNEF+L+SKSTIGVEFATKSI+ +GKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKH+TF+NVERWLKELRDHA++NIV+MLVGNKSDLRHLR VSTEEAMA+AE + +AFIETSALD+SGVDTAFQRILTEIY+ MSRK++ G +A +ITQGE IA
Sbjct: 2 LKQEDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLDSKSTIGVEFATKSIKTDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDISKHLTFDNVERWLKELRDHADSNIVIMLVGNKSDLRHLRAVSTEEAMAYAESNGIAFIETSALDSSGVDTAFQRILTEIYQKMSRKSMVGGGADADASITQGEPIA 199 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5807.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5807.1.1 >prot_P-wetherbeei_contig5807.1.1 ID=prot_P-wetherbeei_contig5807.1.1|Name=mRNA_P-wetherbeei_contig5807.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=216bp MSHDDQYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKback to top mRNA from alignment at P-wetherbeei_contig5807:1526..3226- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5807.1.1 ID=mRNA_P-wetherbeei_contig5807.1.1|Name=mRNA_P-wetherbeei_contig5807.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1701bp|location=Sequence derived from alignment at P-wetherbeei_contig5807:1526..3226- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5807:1526..3226- >mRNA_P-wetherbeei_contig5807.1.1 ID=mRNA_P-wetherbeei_contig5807.1.1|Name=mRNA_P-wetherbeei_contig5807.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=648bp|location=Sequence derived from alignment at P-wetherbeei_contig5807:1526..3226- (Phaeothamnion wetherbeei SAG_119_79)back to top |