mRNA_P-wetherbeei_contig58062.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58062.1.1
Unique NamemRNA_P-wetherbeei_contig58062.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: V4RC36_9HYPH (Putative metallo-beta-lactamase n=1 Tax=Lutibaculum baratangense AMV1 TaxID=631454 RepID=V4RC36_9HYPH)

HSP 1 Score: 219 bits (558), Expect = 1.270e-69
Identity = 99/145 (68.28%), Postives = 122/145 (84.14%), Query Frame = 1
Query:   13 GYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            GY+I+IVV+G+PGKS+CHGGLGWS++ LLRGH RVALVDVGAF  RK +I+RLA  GLTP DVTDVLLTH+HYDHSVNW +F +AR+ IGG E+DW++ +P+G + VPELY+REL   P L RV  GDEV+PG+ A+DAPGHTPG
Sbjct:    8 GYEIDIVVEGYPGKSVCHGGLGWSSIVLLRGHGRVALVDVGAFGVRKTLIKRLADYGLTPKDVTDVLLTHSHYDHSVNWTLFSHARIVIGGDELDWSVNEPWGESPVPELYVRELSTWPTLARVSEGDEVLPGITAYDAPGHTPG 152          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: UPI000931F7BD (MBL fold metallo-hydrolase n=1 Tax=Hyphomicrobium sp. CS1BSMeth3 TaxID=1892844 RepID=UPI000931F7BD)

HSP 1 Score: 217 bits (552), Expect = 9.130e-69
Identity = 96/149 (64.43%), Postives = 122/149 (81.88%), Query Frame = 1
Query:    1 MQAGGYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            M+ G Y+++I++ G+PGKS+CHG LGWST+ALLRG  RVALVDVG+F  R LI ++LA  GL P DVTDV+LTH+H+DHSVNW+MFP ARVHIG  E++W+L++P+G   VPELY+REL GSPQL RV  G EV+P +V+H APGHTPG
Sbjct:    1 MKFGSYNLDILITGYPGKSVCHGSLGWSTIALLRGEGRVALVDVGSFNQRSLIQKQLATHGLGPADVTDVILTHSHHDHSVNWVMFPKARVHIGAGELEWSLKEPFGTGPVPELYVRELAGSPQLVRVTPGSEVLPRIVSHHAPGHTPG 149          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: A0A1E4LZF7_9PROT (MBL fold hydrolase n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A1E4LZF7_9PROT)

HSP 1 Score: 216 bits (551), Expect = 1.420e-68
Identity = 98/145 (67.59%), Postives = 120/145 (82.76%), Query Frame = 1
Query:   13 GYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            G+ I+I+VQG+PGKS+CHGGLGWST+ALLRGH RV LVDVG+F  R+ II+RL A GL P DVTDVLLTH+H+DHS+NW+MFP ARV IG  E+ W+L +P+G T VPELY+RELD S Q  RV+AG E++PG+ A DAPGHTPG
Sbjct:    7 GWRIDIIVQGYPGKSVCHGGLGWSTIALLRGHGRVVLVDVGSFGQRQPIIDRLRAHGLAPADVTDVLLTHSHWDHSINWVMFPKARVVIGADELAWSLNEPWGTTPVPELYVRELDRSAQTVRVRAGGEILPGISAADAPGHTPG 151          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: A0A4R7BW77_9HYPH (Glyoxylase-like metal-dependent hydrolase (Beta-lactamase superfamily II) n=1 Tax=Enterovirga rhinocerotis TaxID=1339210 RepID=A0A4R7BW77_9HYPH)

HSP 1 Score: 216 bits (551), Expect = 1.770e-68
Identity = 97/146 (66.44%), Postives = 120/146 (82.19%), Query Frame = 1
Query:   10 GGYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            GGY ++I+V G+PGKS+CHGGLGWST+ALLRGH R+ALVDVG F  R  I++ LA  GLTP DVTDV+L+H+H+DHSVNW+MFP AR+ IG  E+ W+L +P+G T VPELY+RELD SP+  RVKAGDEV+PG+  H APGHTPG
Sbjct:   15 GGYLVDILVHGYPGKSVCHGGLGWSTIALLRGHGRIALVDVGCFGQRDPILKGLARVGLTPADVTDVILSHSHWDHSVNWVMFPKARIVIGEEELAWSLAEPWGTTPVPELYVRELDRSPKTVRVKAGDEVLPGITCHHAPGHTPG 160          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: A0A354UXY9_9PROT (MBL fold hydrolase n=2 Tax=Acetobacteraceae TaxID=433 RepID=A0A354UXY9_9PROT)

HSP 1 Score: 213 bits (543), Expect = 1.930e-67
Identity = 90/144 (62.50%), Postives = 120/144 (83.33%), Query Frame = 1
Query:   16 YDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            Y ++I+VQG+PGKS+CHGGLGWST+ LLRG+DRVAL+D G F++R  +I  L   GLTP DVTDV+LTH+H+DHS+NW++FP A + IG  E+DW++++P+G T VPELY+REL GSPQL R+K GD ++PG+ A+DAPGHTPG
Sbjct:    3 YKLDILVQGYPGKSVCHGGLGWSTIVLLRGNDRVALIDCGTFSHRSNLINGLKRHGLTPADVTDVVLTHSHHDHSINWVLFPKATIWIGAEELDWSVREPWGSTPVPELYVRELAGSPQLKRMKHGDTILPGMTAYDAPGHTPG 146          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: UPI00136FE1CF (MBL fold metallo-hydrolase n=1 Tax=Propylenella binzhouense TaxID=2555902 RepID=UPI00136FE1CF)

HSP 1 Score: 209 bits (533), Expect = 6.750e-66
Identity = 98/149 (65.77%), Postives = 115/149 (77.18%), Query Frame = 1
Query:    1 MQAGGYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            M+   Y I+++VQGFPGK++CHGGLGWSTVALLRG  R  LVDVGAF  RK I+ERLA  GL P D+TDV+LTH HYDHSVNW+ FP AR+ IGG E+DWA   P+G T VPELY+REL    +L RVKAGD  +PG+VAH  PGHTPG
Sbjct:    1 MRLDDYTIDVLVQGFPGKAVCHGGLGWSTVALLRGGSRTILVDVGAFGMRKTILERLARHGLKPEDITDVVLTHCHYDHSVNWVTFPAARIFIGGDELDWAQTVPFGQTIVPELYVRELVACERLVRVKAGDVPLPGLVAHPTPGHTPG 149          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: A0A2D7FFX9_9HYPH (MBL fold hydrolase n=2 Tax=Hyphomicrobiaceae TaxID=45401 RepID=A0A2D7FFX9_9HYPH)

HSP 1 Score: 208 bits (530), Expect = 2.460e-65
Identity = 92/146 (63.01%), Postives = 117/146 (80.14%), Query Frame = 1
Query:   10 GGYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            G Y+I+I+V G+PGKS+CHG LG+ST+ L+R HDR+ALVDVG+F  RKL+IE L  RGL P D+TDVLLTH+HYDHS+NW++FPNAR+ IG  E+DW+L  P+G T VPELY+RELD + +  R   GDE+ PG+ AH APGHTPG
Sbjct:   10 GDYEIDIIVHGYPGKSVCHGSLGFSTIVLIRRHDRIALVDVGSFGQRKLLIEHLDRRGLKPSDITDVLLTHSHYDHSINWVLFPNARLVIGRTELDWSLTVPWGETVVPELYVRELDQTDRTARADDGDEIFPGITAHLAPGHTPG 155          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: A0A225MD55_9BURK (MBL fold hydrolase n=2 Tax=Candidimonas TaxID=1074468 RepID=A0A225MD55_9BURK)

HSP 1 Score: 207 bits (528), Expect = 4.660e-65
Identity = 91/149 (61.07%), Postives = 116/149 (77.85%), Query Frame = 1
Query:    1 MQAGGYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            M   GY++E++V GFPGK +CHGGLGWST+ALLRGH RVAL+D G    R+L+ E L  RGL P DVTD+LLTH+H+DHS+NW +FP AR+ IG  E+DW+L+QP+G T VPELY+REL   P+LHR+  G+E +P + AH APGHTPG
Sbjct:    2 MNIAGYELELLVIGFPGKGVCHGGLGWSTIALLRGHGRVALIDTGPMGMRRLLREELRRRGLAPADVTDLLLTHSHHDHSINWTLFPQARIGIGAHELDWSLEQPWGETPVPELYMRELSSWPRLHRLADGEEALPHLTAHVAPGHTPG 150          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: A0A2D9JPD6_9GAMM (MBL fold hydrolase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2D9JPD6_9GAMM)

HSP 1 Score: 206 bits (525), Expect = 1.410e-64
Identity = 95/146 (65.07%), Postives = 116/146 (79.45%), Query Frame = 1
Query:   10 GGYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            G Y I+I+V GFPGKS+CHG LG+ST+ L+R  +RVAL+DVG+F  R L+ ++L   GL P DVTDVLLTH HYDHS+NW+MFPNARV IG  E+DW+L +P+G T VPELY+REL GS QLH V +GDEV PG+VAH  PGHTPG
Sbjct:   11 GDYQIDILVTGFPGKSVCHGSLGFSTIVLIRVAERVALLDVGSFGQRYLLQDQLQLHGLGPDDVTDVLLTHCHYDHSINWVMFPNARVVIGREELDWSLDEPWGRTVVPELYVRELAGSHQLHAVASGDEVFPGIVAHACPGHTPG 156          
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Match: A0A225MRI7_9BURK (MBL fold hydrolase n=1 Tax=Candidimonas nitroreducens TaxID=683354 RepID=A0A225MRI7_9BURK)

HSP 1 Score: 204 bits (518), Expect = 1.620e-63
Identity = 92/149 (61.74%), Postives = 117/149 (78.52%), Query Frame = 1
Query:    1 MQAGGYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYRKLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDWALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG 447
            +QA  Y I+I+VQG+PGKS+CHG LGWSTVAL+RG   +A+VD G F  R L+IE+LA  GL P DVTDV+LTHAHYDHSVNW MFP+A +HIG +E+ W+L +P+G+T VPELY+REL   P+L ++  G E+ PG+ AH APGHTPG
Sbjct:    3 LQADAYQIDILVQGYPGKSVCHGSLGWSTVALIRGDGHIAIVDTGPFGARGLVIEQLARHGLQPADVTDVVLTHAHYDHSVNWTMFPDAHIHIGESELAWSLGEPWGITPVPELYMRELARWPRLKKIADGAELFPGMSAHVAPGHTPG 151          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58062.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
V4RC36_9HYPH1.270e-6968.28Putative metallo-beta-lactamase n=1 Tax=Lutibaculu... [more]
UPI000931F7BD9.130e-6964.43MBL fold metallo-hydrolase n=1 Tax=Hyphomicrobium ... [more]
A0A1E4LZF7_9PROT1.420e-6867.59MBL fold hydrolase n=2 Tax=Rhodospirillales TaxID=... [more]
A0A4R7BW77_9HYPH1.770e-6866.44Glyoxylase-like metal-dependent hydrolase (Beta-la... [more]
A0A354UXY9_9PROT1.930e-6762.50MBL fold hydrolase n=2 Tax=Acetobacteraceae TaxID=... [more]
UPI00136FE1CF6.750e-6665.77MBL fold metallo-hydrolase n=1 Tax=Propylenella bi... [more]
A0A2D7FFX9_9HYPH2.460e-6563.01MBL fold hydrolase n=2 Tax=Hyphomicrobiaceae TaxID... [more]
A0A225MD55_9BURK4.660e-6561.07MBL fold hydrolase n=2 Tax=Candidimonas TaxID=1074... [more]
A0A2D9JPD6_9GAMM1.410e-6465.07MBL fold hydrolase n=1 Tax=Gammaproteobacteria bac... [more]
A0A225MRI7_9BURK1.620e-6361.74MBL fold hydrolase n=1 Tax=Candidimonas nitroreduc... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58062contigP-wetherbeei_contig58062:2..448 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog631454.N177_2961
PFAMsLactamase_B
Model size447
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.08e-70
EggNOG OGsCOG0491@1|root,COG0491@2|Bacteria,1R9ID@1224|Proteobacteria
DescriptionMetallo-beta-lactamase superfamily
Cds size447
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186860.5430427-CDS-P-wetherbeei_contig58062:1..4481683186860.5430427-CDS-P-wetherbeei_contig58062:1..448Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58062 2..448 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58062.1.1prot_P-wetherbeei_contig58062.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58062 2..448 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58062.1.1

>prot_P-wetherbeei_contig58062.1.1 ID=prot_P-wetherbeei_contig58062.1.1|Name=mRNA_P-wetherbeei_contig58062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=149bp
MQAGGYDIEIVVQGFPGKSICHGGLGWSTVALLRGHDRVALVDVGAFTYR
KLIIERLAARGLTPGDVTDVLLTHAHYDHSVNWIMFPNARVHIGGAEIDW
ALQQPYGLTNVPELYIRELDGSPQLHRVKAGDEVMPGVVAHDAPGHTPG
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mRNA from alignment at P-wetherbeei_contig58062:2..448-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58062.1.1 ID=mRNA_P-wetherbeei_contig58062.1.1|Name=mRNA_P-wetherbeei_contig58062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig58062:2..448- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGCCGGCGGTTACGATATCGAGATCGTGGTCCAGGGCTTTCCGGG CAAATCGATTTGTCACGGCGGGCTGGGCTGGAGCACGGTCGCGCTGCTGC GCGGCCATGACCGGGTGGCGCTGGTCGATGTCGGCGCCTTCACCTATCGC AAGCTGATCATCGAGCGGCTTGCCGCGCGCGGTCTGACGCCGGGCGACGT CACCGACGTGCTGCTCACCCATGCCCATTACGATCATTCCGTGAACTGGA TCATGTTCCCGAATGCGCGGGTGCATATTGGCGGCGCGGAAATCGACTGG GCGTTGCAGCAGCCCTACGGTCTCACCAATGTCCCGGAACTCTATATCCG CGAACTCGACGGCTCGCCGCAGCTCCACCGGGTCAAGGCCGGCGACGAGG TGATGCCGGGCGTGGTCGCGCATGACGCGCCCGGTCACACGCCGGGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58062:2..448-

>mRNA_P-wetherbeei_contig58062.1.1 ID=mRNA_P-wetherbeei_contig58062.1.1|Name=mRNA_P-wetherbeei_contig58062.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=447bp|location=Sequence derived from alignment at P-wetherbeei_contig58062:2..448- (Phaeothamnion wetherbeei SAG_119_79)
ATGCAGGCCGGCGGTTACGATATCGAGATCGTGGTCCAGGGCTTTCCGGG
CAAATCGATTTGTCACGGCGGGCTGGGCTGGAGCACGGTCGCGCTGCTGC
GCGGCCATGACCGGGTGGCGCTGGTCGATGTCGGCGCCTTCACCTATCGC
AAGCTGATCATCGAGCGGCTTGCCGCGCGCGGTCTGACGCCGGGCGACGT
CACCGACGTGCTGCTCACCCATGCCCATTACGATCATTCCGTGAACTGGA
TCATGTTCCCGAATGCGCGGGTGCATATTGGCGGCGCGGAAATCGACTGG
GCGTTGCAGCAGCCCTACGGTCTCACCAATGTCCCGGAACTCTATATCCG
CGAACTCGACGGCTCGCCGCAGCTCCACCGGGTCAAGGCCGGCGACGAGG
TGATGCCGGGCGTGGTCGCGCATGACGCGCCCGGTCACACGCCGGGT
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