mRNA_P-wetherbeei_contig58029.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: I3D5P0_9ARCH (Uncharacterized protein n=1 Tax=Candidatus Nitrosopumilus salaria BD31 TaxID=859350 RepID=I3D5P0_9ARCH) HSP 1 Score: 216 bits (551), Expect = 3.220e-70 Identity = 104/115 (90.43%), Postives = 106/115 (92.17%), Query Frame = 1
Query: 1 GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSQSSILMPLHYQYDVRPYLGYLRTPPLLFGRRPPQSNCLPYTVPDPDKGPRLEPQHYQAGISTSPP 345
GAKLPRRYELLGGISLLSP YLLSVERWPFH+EPPDHYDLLSHLLDLSVSQSS LMPLHYQYD RPYLGYLRTPPLLFGRRPPQSNC PYTVPDPD GPRLEPQ +Q GIS S P
Sbjct: 65 GAKLPRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQSSNLMPLHYQYDFRPYLGYLRTPPLLFGRRPPQSNCPPYTVPDPDYGPRLEPQQHQGGISRSTP 179
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: A0A388PTV7_9PROT (Uncharacterized protein n=1 Tax=Methylophilaceae bacterium TaxID=2030816 RepID=A0A388PTV7_9PROT) HSP 1 Score: 207 bits (526), Expect = 6.160e-67 Identity = 99/111 (89.19%), Postives = 102/111 (91.89%), Query Frame = 1
Query: 1 GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSQSSILMPLHYQYDVRPYLGYLRTPPLLFGRRPPQSNCLPYTVPDPDKGPRLEPQHYQAGIS 333
GAKLPRRYELLGGISLLSP YLLSVERWPFH+EPPDHYDLLSHLLDLSVSQSS LMPLHYQYD RPYLGYLRTPPLLFGRRPPQSNC PYTVP+P G RLEPQ +Q GIS
Sbjct: 6 GAKLPRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQSSNLMPLHYQYDFRPYLGYLRTPPLLFGRRPPQSNCPPYTVPNPVSGSRLEPQQHQGGIS 116
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: A0A8H2LVE7_BURPE (Cell wall-associated hydrolase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A8H2LVE7_BURPE) HSP 1 Score: 199 bits (506), Expect = 1.310e-62 Identity = 99/116 (85.34%), Postives = 102/116 (87.93%), Query Frame = 1
Query: 1 GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSQSSILMPLHYQYDVRPYLGYLRTPPLLFGRRPPQSNCLPYTVPDPDKGPRLEPQHYQAGIS-TSPP 345
GAK RRYELLGGISLLSP YLLSVERWPFH+EPPDHYDLLSHLLDLSVSQ S LMPLHYQ+D RPYL YLRTPPL FGRRPPQSNCLP TVPDPD GPRLEPQ Q GIS T+PP
Sbjct: 86 GAKHRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYDLLSHLLDLSVSQLSTLMPLHYQHDFRPYLAYLRTPPLRFGRRPPQSNCLPCTVPDPDHGPRLEPQTNQGGISRTAPP 201
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: A0A6B2E5S5_9DIPT (Putative cell wall-associated hydrolase (Fragment) n=1 Tax=Phlebotomus kandelakii TaxID=1109342 RepID=A0A6B2E5S5_9DIPT) HSP 1 Score: 188 bits (478), Expect = 3.680e-59 Identity = 94/111 (84.68%), Postives = 95/111 (85.59%), Query Frame = 1
Query: 1 GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSQSSILMPLHYQYDVRPYLGYLRTPPLLFGRRPPQSNCLPYTVPDPDKGPRLEPQHYQAGIS 333
GAK RR ELLGGISLLSP YLLSVERWPFH+EPPDHY LLSHLLDLSVSQSS LMPLHYQYDVRPYL YLR PPLLF RRPPQSNC P TVPDPD G RLEPQ Q GIS
Sbjct: 61 GAKHRRRCELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSHLLDLSVSQSSTLMPLHYQYDVRPYLAYLRAPPLLFRRRPPQSNCPPCTVPDPDNGSRLEPQTDQGGIS 171
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: A0A510LIN6_NEIGO (Cell wall-associated hydrolase n=3 Tax=Neisseria TaxID=482 RepID=A0A510LIN6_NEIGO) HSP 1 Score: 184 bits (466), Expect = 8.890e-57 Identity = 92/115 (80.00%), Postives = 96/115 (83.48%), Query Frame = 1
Query: 1 GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSQSSILMPLHYQYDVRPYLGYLRTPPLLFGRRPPQSNCLPYTVPDPDKGPRLEPQHYQAGISTSPP 345
GAKL RRYELLGGISLLSP YLLSVERWPFH+EPPDHY LLSHL DLSVSQ S L+PLHYQ D RP LG LRTPPL FGRRPPQSNCLP TVPDPD G LEPQ +Q GIS + P
Sbjct: 86 GAKLRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSHLPDLSVSQLSYLLPLHYQSDFRPDLGNLRTPPLRFGRRPPQSNCLPCTVPDPDDGSGLEPQRHQGGISRTTP 200
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: A0A0J7YMY6_BETVV (Uncharacterized protein (Fragment) n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=A0A0J7YMY6_BETVV) HSP 1 Score: 179 bits (454), Expect = 2.120e-55 Identity = 87/96 (90.62%), Postives = 89/96 (92.71%), Query Frame = 1
Query: 1 GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSQSSILMPLHYQYDVRPYLGYLRTPPLLFGRRPPQSNCLPYTVPDPD 288
GAKL RRYELLGGISLLSP YLLSVERWPFHSEPPDHY LLSHLLDLSVSQSS+L+PLHYQYDVRPYLG LRTPPL FGRRPPQSNC PYTVPD D
Sbjct: 77 GAKLRRRYELLGGISLLSPEYLLSVERWPFHSEPPDHYVLLSHLLDLSVSQSSLLLPLHYQYDVRPYLGDLRTPPLPFGRRPPQSNCPPYTVPDLD 172
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: A0A645H9E7_9ZZZZ (Uncharacterized protein n=1 Tax=bioreactor metagenome TaxID=1076179 RepID=A0A645H9E7_9ZZZZ) HSP 1 Score: 176 bits (445), Expect = 1.540e-54 Identity = 85/96 (88.54%), Postives = 88/96 (91.67%), Query Frame = 1
Query: 1 GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSQSSILMPLHYQYDVRPYLGYLRTPPLLFGRRPPQSNCLPYTVPDPD 288
GAK RRYELLGGISLLSP YLLSVERWPFH+EPPDHY LLSHLLDLSVSQSS+L+PLHYQYDVRPYLG LRTPPL FGRRPPQSNC P TVPDPD
Sbjct: 6 GAKHRRRYELLGGISLLSPEYLLSVERWPFHTEPPDHYVLLSHLLDLSVSQSSLLLPLHYQYDVRPYLGDLRTPPLPFGRRPPQSNCPPCTVPDPD 101
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: A0A0H5PZI5_9ZZZZ (Uncharacterized protein n=1 Tax=uncultured prokaryote TaxID=198431 RepID=A0A0H5PZI5_9ZZZZ) HSP 1 Score: 172 bits (435), Expect = 6.590e-53 Identity = 88/115 (76.52%), Postives = 93/115 (80.87%), Query Frame = 1
Query: 1 GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSQSSILMPLHYQYDVRPYLGYLRTPPLLFGRRPPQSNCLPYTVPDPDKGPRLEPQHYQAGISTSPP 345
GAK RRYELLGGISLLSP YLLSVERWPFHS PPDHYDLLSHLL+L +SQSS L+PLHYQ+D RPYL YLRTPPL F RRPPQSNCLP TVP+ LEPQ Q GIS S P
Sbjct: 6 GAKHRRRYELLGGISLLSPEYLLSVERWPFHSVPPDHYDLLSHLLELWLSQSSTLLPLHYQHDFRPYLAYLRTPPLPFRRRPPQSNCLPCTVPNSVHLSWLEPQTNQGGISRSTP 120
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: L9U5D6_9GAMM (Uncharacterized protein n=1 Tax=Halomonas titanicae BH1 TaxID=1204738 RepID=L9U5D6_9GAMM) HSP 1 Score: 162 bits (409), Expect = 7.580e-49 Identity = 81/111 (72.97%), Postives = 85/111 (76.58%), Query Frame = 2
Query: 2 VPNSPVDMNSWEESACYPQRTFYPLSDGPSIQNHRITMTCFRTCSTCQSRSQASLCHCTISTMSDRT*DTFALLRYSLGGDRPSQTACHTRSPIPIRDPG*NRNTIRLVFQ 334
+PN+ VD+NSW SACYP+ TFYPLSDGPSIQNHRIT TCFRTCSTC SRSQA LC CT TMSDR TF LLRYSLGGDRPSQT HT S I I D N N RLVFQ
Sbjct: 1 MPNTAVDVNSWAVSACYPRSTFYPLSDGPSIQNHRITRTCFRTCSTCLSRSQAPLCSCTQCTMSDRAEGTFVLLRYSLGGDRPSQTTHHTLSSIRITDLSENANDARLVFQ 111
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Match: A0A0V0HP68_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0HP68_SOLCH) HSP 1 Score: 161 bits (407), Expect = 5.020e-48 Identity = 82/110 (74.55%), Postives = 85/110 (77.27%), Query Frame = 2
Query: 14 PVDMNSWEESACYPQRTFYPLSDGPSIQNHRITMTCFRTCSTCQSRSQASLCHCTISTMSDRT*DTFALLRYSLGGDRPSQTACHTRSPIPIRDPG*NRNTIRLVFQRRL 343
PVDM SACYPQRTFYPLSDGPSIQNHRITM+CFR CSTCQSRS A LCHCTI TMSDR TF LLRY+LGGDRPSQTA H SPI I D G N R+VFQR L
Sbjct: 90 PVDMKLLGVSACYPQRTFYPLSDGPSIQNHRITMSCFRICSTCQSRSXARLCHCTIVTMSDRNXRTFELLRYALGGDRPSQTAYHALSPIQIMDLGXNLKHTRVVFQRWL 199 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58029.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58029.3.1 >prot_P-wetherbeei_contig58029.3.1 ID=prot_P-wetherbeei_contig58029.3.1|Name=mRNA_P-wetherbeei_contig58029.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp GAKLPRRYELLGGISLLSPAYLLSVERWPFHSEPPDHYDLLSHLLDLSVSback to top mRNA from alignment at P-wetherbeei_contig58029:162..506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58029.3.1 ID=mRNA_P-wetherbeei_contig58029.3.1|Name=mRNA_P-wetherbeei_contig58029.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig58029:162..506- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58029:162..506- >mRNA_P-wetherbeei_contig58029.3.1 ID=mRNA_P-wetherbeei_contig58029.3.1|Name=mRNA_P-wetherbeei_contig58029.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig58029:162..506- (Phaeothamnion wetherbeei SAG_119_79)back to top |