prot_P-wetherbeei_contig5801.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5801.2.1
Unique Nameprot_P-wetherbeei_contig5801.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length533
Homology
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7S4D790_HETAK (tRNA pseudouridine synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4D790_HETAK)

HSP 1 Score: 116 bits (290), Expect = 4.500e-26
Identity = 72/184 (39.13%), Postives = 89/184 (48.37%), Query Frame = 0
Query:  213 YRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATE 396
            YRAPP +LAAL +AL    GT NFHN+T++R A D +CHRYI+S + GEP+V                                          HG               EW  +TV GQSFLL+QIRK+VA+A  VARG  +   V       K     APG GL+LD LFFD YN+NLA +
Sbjct:   27 YRAPPEKLAALASALAGYRGTHNFHNFTSRRAATDKSCHRYIMSFDTGEPWV----------------------------------------DDHGT--------------EWVCLTVLGQSFLLNQIRKLVALAVQVARGAQTRGAVRTALSKKKHCLPMAPGDGLYLDSLFFDAYNKNLAKD 156          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A835YJ34_9STRA (Pseudouridine synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJ34_9STRA)

HSP 1 Score: 107 bits (267), Expect = 7.420e-21
Identity = 158/515 (30.68%), Postives = 192/515 (37.28%), Query Frame = 0
Query:    5 INARLPPAVRVMDVRRVTGSFDARNACTRRRYRYLLPTALLMPRAEAAALLGRAEAMAAGGEASEXXXXXXXXXXXXXXEASXXXXEVVAXXXXXEEMVVERVSAEFGAAATNRAATANGDTAVKHREQGTGGGEAM---------ANNXXXXXXXXXXXXXXXXXXAGTSRCGRSRGVGGSICDDXXXXXXXXXXGCG-------------KYALPPAVRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRWGAESEPGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNATEEWVPDAADAASAAAVDAFRRERIVGHIVRSPAARARFVGWMDAMRHSPPNYA 497
            +NA LP A+RV+ V RVTG F+A+NACT RRY YLLPT  L        LL  A+A  A    S         XXXXXX   X     V                          A +   +A+     G G              A        XXXXXXXXXXXX                   XXXXXXX   G G             ++   PAV      +L  +R  P +LA LR  L    GT+N+HNYT +R A DP+C R + S   GEPFV                                                         G+EW  ++V GQSF+LHQIRKMVA A DV R   S  D+ R+          AP  GLFLD LFF  Y             R+GA                                   +AT     + +  A+AA V A R +RIV HIV   AA  +F  W+D M   P NY+
Sbjct:  214 VNAHLPDAIRVLKVARVTGGFNAKNACTGRRYAYLLPTCTLAAPEYIDGLLAEAKAWEASQPRSAGDNVDVAAXXXXXXXXXXAAPMAVVEPAENPAXXXXXXXXXXXXXXXXVTAASADQSALPGSSHGNGXXXXXXXXXXXXXXAGTNATAATXXXXXXXXXXXXXXXXXXXXXXXXAPXXXXXXXXXXXXEREGAGXXXXXXXPEGEEKRWLSSPAVIARVAEKLRTFRITPEKLARLREVLALFRGTKNYHNYTIRRAATDPSCSRVMRSFTAGEPFV-------------------------------------------------------RGGVEWVLLSVEGQSFMLHQIRKMVATAVDVVRAQASVEDMQRSLTQAHMILGLAPSKGLFLDKLFFSMYEE-----------RYGAA----------------------------------DATSLKCREGS--AAAARVTAMR-DRIVSHIVDGEAAHLQFCAWLDYMSKFPKNYS 625          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A6U2S3D4_9STRA (tRNA pseudouridine synthase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A6U2S3D4_9STRA)

HSP 1 Score: 99.0 bits (245), Expect = 3.540e-20
Identity = 67/196 (34.18%), Postives = 85/196 (43.37%), Query Frame = 0
Query:  209 ELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRW 404
            +L+ YR P  RL  LRAALK+ EGT ++HNYT  + + D +  RY++S    +P V                                                         G EW    V GQSFLLHQIRKMV +AT+VARG         TF N+K   A AP  GLFLDM +FD YN +   +    P+ W
Sbjct:    2 QLSKYRVPSDRLEKLRAALKRYEGTHSYHNYTNGKTSDDKSAKRYMMSFIALDPVV------------------------------------------------------DEFGTEWIPTQVVGQSFLLHQIRKMVCMATEVARGATDMDAFESTFTNIKIPTATAPAQGLFLDMSYFDAYNNDKRHQI-ENPILW 142          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7S1TVP3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TVP3_9STRA)

HSP 1 Score: 100 bits (249), Expect = 1.180e-18
Identity = 71/207 (34.30%), Postives = 92/207 (44.44%), Query Frame = 0
Query:  199 PPAVRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPA-CHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRW 404
            PP V+    AELA YR    ++  L+  +K  EGT  +HNYT  +     A C RYI   +V +P+V +                                                       G+EW  IT+ GQSFLL+QIRKMVA+  +V RG C+   + R+F  VK     AP  GLFL+  FFDEYNR LA +  R PL W
Sbjct:  383 PPEVKAEVAAELAKYRVTEEQMDKLKDVVKAFEGTHRYHNYTQIKAVKTFASCLRYIKHMDVSDPYVPS---------------------------------------------------EDPSGMEWVRITLIGQSFLLNQIRKMVAMMAEVTRGQCTMEKMERSFAEVKMDLDIAPPTGLFLEKPFFDEYNRRLADD--RMPLGW 536          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7S2MCN9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MCN9_9STRA)

HSP 1 Score: 97.8 bits (242), Expect = 6.860e-18
Identity = 74/209 (35.41%), Postives = 87/209 (41.63%), Query Frame = 0
Query:  205 AAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVAR--TFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRWGAESEPG 411
            AA  E AAYR  P  L   R AL   EGT +FHNYT+ ++  DP   R I S   G+PFV                                                         G EW  +T+ GQSFLLHQIRKMVA A D+A    S A  A   TFG+ K     AP  GLFL   FF+ YN +    TG RPLR   + + G
Sbjct:  287 AAAPEAAAYRVTPNLLDGFRLALSLFEGTHHFHNYTSSKKFSDPQSQRNIHSVSCGDPFV------------------------------------------------------REDGREWVVVTIMGQSFLLHQIRKMVATAIDLAHKQRSEATAAMETTFGDNKVLLPLAPSLGLFLHRPFFEPYNAHF---TGDRPLRRNLDDQQG 438          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A1V6NSK4_PENDC (PseudoU_synth_1 domain-containing protein n=1 Tax=Penicillium decumbens TaxID=69771 RepID=A0A1V6NSK4_PENDC)

HSP 1 Score: 97.8 bits (242), Expect = 9.100e-18
Identity = 68/202 (33.66%), Postives = 92/202 (45.54%), Query Frame = 0
Query:  201 AVRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPL 402
            A++TA      AYR PP+R+A L+ AL +  GT+NFHNYT ++   DP+  RYI S  V    +V  G                                                       EW ++ V GQSF++HQIRKMVA+AT V R GC+A  +  T+G  +     APG GL L+   FD YN+  A   GR+P+
Sbjct:  416 AIKTAYTTARRAYRVPPSRVARLQEALDRYVGTKNFHNYTIQKTHTDPSAKRYIKSFNVDPTPIVINGT------------------------------------------------------EWLSLKVHGQSFMMHQIRKMVAMATLVVRSGCTADRIDDTYGPHRIAIPKAPGLGLLLERPIFDTYNQK-AEGLGRQPV 562          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7S3GQ99_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GQ99_9STRA)

HSP 1 Score: 95.9 bits (237), Expect = 2.540e-17
Identity = 63/185 (34.05%), Postives = 83/185 (44.86%), Query Frame = 0
Query:  207 FAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNR 391
            + ++ ++R+   ++A LRAALK  EGTR +HN+T  +   D    R+IIS E GEPFV  G                                                      G EW  +TV GQSFLL+QIRKMVA+A +V RG    + +   F N K     AP  GL+L  LFFD YN+
Sbjct:  226 YGQVKSHRSTSEQIATLRAALKSYEGTRAYHNFTTGKHPEDANAKRFIISFEAGEPFVDEG-----------------------------------------------------TGAEWVLLTVLGQSFLLNQIRKMVAMAVEVTRGAAQLSTIMDAFTNRKMDLPMAPALGLYLGELFFDGYNK 357          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A7R8V7A9_HERIL (Hypothetical protein n=2 Tax=Hermetia illucens TaxID=343691 RepID=A0A7R8V7A9_HERIL)

HSP 1 Score: 94.7 bits (234), Expect = 3.850e-17
Identity = 61/199 (30.65%), Postives = 86/199 (43.22%), Query Frame = 0
Query:  209 ELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRWGAE 407
            ++ +YRAP  R+  L   LKQ EGT+NFHN+T+++   DP+  RYI+S    EPF+                                                          +E+A IT+ GQSF+LHQIRKMV ++  V RG  +   + R+F   +     APG GL LD + +D YN     +    PL W  E
Sbjct:  218 QMESYRAPKERIDRLNEILKQFEGTKNFHNFTSRKDFIDPSSKRYIMSFACCEPFL------------------------------------------------------SPDNIEFATITIQGQSFMLHQIRKMVGLSLAVLRGHTTEETIKRSFTEERLDIPMAPGLGLVLDRIHYDRYNERYGQDGVHAPLTWEKE 362          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: A0A8J5QLP7_9ASCO (PUS1 n=1 Tax=[Candida] subhashii TaxID=561895 RepID=A0A8J5QLP7_9ASCO)

HSP 1 Score: 95.5 bits (236), Expect = 3.860e-17
Identity = 65/198 (32.83%), Postives = 88/198 (44.44%), Query Frame = 0
Query:  212 AYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPLRWGAESE 409
            AYR P  RL+  R+A++Q +GT NFHN+T  +   D +  RYIIST+V +PFV+ G D                                                      EW +I + GQSF+LHQIRKMV++A+ V R GC    +   F   K     AP  GL L+   FD YN+ L T+    P+ +G   E
Sbjct:  328 AYRIPNNRLSQFRSAMEQYQGTHNFHNFTIGKSFKDQSAQRYIISTKVSDPFVIEGTD-----------------------------------------------------TEWISIRIHGQSFMLHQIRKMVSMASMVVRIGCPVEIIQDFFNKEKINIPKAPALGLLLENPVFDAYNQML-TKLEYDPIEFGKYDE 471          
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Match: C4JEG8_UNCRE (PseudoU_synth_1 domain-containing protein n=1 Tax=Uncinocarpus reesii (strain UAMH 1704) TaxID=336963 RepID=C4JEG8_UNCRE)

HSP 1 Score: 95.5 bits (236), Expect = 4.130e-17
Identity = 63/201 (31.34%), Postives = 88/201 (43.78%), Query Frame = 0
Query:  202 VRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPACHRYIISTEVGEPFVVAGGDGDGXXXXXXXXXXXXXXXXXXXXXXXXXXXXCSSGSSHGDGGXXXXXXXXXXGLEWAAITVTGQSFLLHQIRKMVAVATDVARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRRPL 402
            VR A F    AYR PPARLA ++  L    GTRNFHNYT ++   DP+  R I S ++ +  ++ GG                                                       EW ++ V GQSF++HQIRKMVA+A  + R G     +A+++G  K     APG GL L+   FD YN+    + G+ P+
Sbjct:  338 VRAAYFKAKRAYRIPPARLARVQEVLDLYVGTRNFHNYTIQKTFRDPSAKRVIKSFKISKDPIIIGGT------------------------------------------------------EWLSLKVHGQSFMMHQIRKMVAMAALIVRCGSDPQLIAQSYGPPKIPIPKAPGLGLLLERPIFDTYNKKATKDLGKNPI 484          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5801.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4D790_HETAK4.500e-2639.13tRNA pseudouridine synthase n=1 Tax=Heterosigma ak... [more]
A0A835YJ34_9STRA7.420e-2130.68Pseudouridine synthase n=1 Tax=Tribonema minus Tax... [more]
A0A6U2S3D4_9STRA3.540e-2034.18tRNA pseudouridine synthase n=1 Tax=Leptocylindrus... [more]
A0A7S1TVP3_9STRA1.180e-1834.30Hypothetical protein (Fragment) n=1 Tax=Phaeomonas... [more]
A0A7S2MCN9_9STRA6.860e-1835.41Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A1V6NSK4_PENDC9.100e-1833.66PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]
A0A7S3GQ99_9STRA2.540e-1734.05Hypothetical protein n=1 Tax=Spumella elongata Tax... [more]
A0A7R8V7A9_HERIL3.850e-1730.65Hypothetical protein n=2 Tax=Hermetia illucens Tax... [more]
A0A8J5QLP7_9ASCO3.860e-1732.83PUS1 n=1 Tax=[Candida] subhashii TaxID=561895 RepI... [more]
C4JEG8_UNCRE4.130e-1731.34PseudoU_synth_1 domain-containing protein n=1 Tax=... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR020097Pseudouridine synthase I, TruA, alpha/beta domainPFAMPF01416PseudoU_synth_1coord: 226..378
e-value: 4.1E-8
score: 33.7
IPR020095Pseudouridine synthase I, TruA, C-terminalGENE3D3.30.70.660coord: 195..501
e-value: 7.4E-40
score: 138.6
NoneNo IPR availablePIRSRPIRSR001430-2PIRSR001430-2coord: 3..43
e-value: 2.9E-6
score: 25.0
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 404..429
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 500..532
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 298..312
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 264..320
NoneNo IPR availablePANTHERPTHR11142:SF4TRNA PSEUDOURIDINE SYNTHASE Acoord: 4..494
IPR001406Pseudouridine synthase I, TruAPANTHERPTHR11142PSEUDOURIDYLATE SYNTHASEcoord: 4..494
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 3..395

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5801contigP-wetherbeei_contig5801:1473..3303 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5801.2.1mRNA_P-wetherbeei_contig5801.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5801 1447..3697 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5801.2.1 ID=prot_P-wetherbeei_contig5801.2.1|Name=mRNA_P-wetherbeei_contig5801.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=533bp
MTAAINARLPPAVRVMDVRRVTGSFDARNACTRRRYRYLLPTALLMPRAE
AAALLGRAEAMAAGGEASEAAAAAREAPEAAAGEASEATEEVVAAKEAGE
EMVVERVSAEFGAAATNRAATANGDTAVKHREQGTGGGEAMANNGGRTLS
GSAAASLRGSAAAGTSRCGRSRGVGGSICDDEDEEEDDDDDGCGKYALPP
AVRTAAFAELAAYRAPPARLAALRAALKQLEGTRNFHNYTAKRRAGDPAC
HRYIISTEVGEPFVVAGGDGDGGGGSGGDSGGGGGDSGGGDSGGGISGGD
CSSGSSHGDGGSTSDDDGGGGGLEWAAITVTGQSFLLHQIRKMVAVATDV
ARGGCSAADVARTFGNVKXXXAPAPGAGLFLDMLFFDEYNRNLATETGRR
PLRWGAESEPGTGTGAGTESGNGTGTKEGAGIAPEPAKAKANATEEWVPD
AADAASAAAVDAFRRERIVGHIVRSPAARARFVGWMDAMRHSPPNYAAVA
EGAAGGGGGGGGGGASTASSGAAPSGASPADA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR020097PsdUridine_synth_TruA_a/b_dom
IPR020095PsdUridine_synth_TruA_C
IPR001406PsdUridine_synth_TruA
IPR020103PsdUridine_synth_cat_dom_sf