mRNA_P-wetherbeei_contig58005.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: UPI001C3D379A (COX15/CtaA family protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3D379A) HSP 1 Score: 250 bits (638), Expect = 2.510e-80 Identity = 132/169 (78.11%), Postives = 143/169 (84.62%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRERGWEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIALVVLAGVLVAWVAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLGAVTVLSGLHPLAVGSHFL+S+ AL CGTLLA+GA D R G R W RRGVLA LSAAVV TGV+VTAAGPHSGDDDVT RFGDLLLA++VHVRAAI VLA VL+AWVAREGGVDRLTARL A+ALPLV LQI +GEYQYR+GLPWQVVVVHVS A L+W
Sbjct: 112 PLGAVTVLSGLHPLAVGSHFLVSIAALGCGTLLALGARDHRDGVTREWSPRRGVLAVLTTLSAAVVVVTGVIVTAAGPHSGDDDVTKRFGDLLLALQVHVRAAIVFTVLAAVLIAWVAREGGVDRLTARLAALALPLVALQIAVGEYQYRNGLPWQVVVVHVSIAALVW 280
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: UPI001C3D4410 (COX15/CtaA family protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D4410) HSP 1 Score: 226 bits (575), Expect = 7.980e-71 Identity = 118/169 (69.82%), Postives = 135/169 (79.88%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRERGWEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIALVVLAGVLVAWVAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLGA+TV SGLHP+AVG+HFLLSMVAL TLLAI A D R GR R WE RRGV+A VA +A V TGVVVTAAGPHSGDDDVT RFGDL++A +VHV+AA LA VLVAW+ REGGVDRLT R A+PLV LQIG+GEYQYR+GLPW+VVV+HV+ AGL+W
Sbjct: 111 PLGAITVASGLHPMAVGAHFLLSMVALALATLLAIRARDHRDGRARRWEPRRGVMAAFVAAAALTVLVTGVVVTAAGPHSGDDDVTERFGDLVVAADVHVKAAFGFTALALVLVAWLWREGGVDRLTRRAAVAAVPLVALQIGLGEYQYRNGLPWEVVVLHVTNAGLVW 279
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: A0A7W0G8R9_9ACTN (COX15/CtaA family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0G8R9_9ACTN) HSP 1 Score: 112 bits (279), Expect = 7.820e-27 Identity = 75/171 (43.86%), Postives = 100/171 (58.48%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRERGWEARRGVLAGAVALSAA--VVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIALVVLAGVLVAWVAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLG +T+ LHPL VG+HFLL++V L LA+ A GR + A R + A A+ L A ++ TG + TAAGPH GD RF +LL AV HVRA A + +LVAW+ RE G R T + L L+ LQ+G+GE Q+R+ LPW +V+VHV A +W
Sbjct: 116 PLGLLTIRLDLHPLMVGTHFLLALVVLAGAVALAVEAWGNARGRVQS-PAPRWLRAVALVLVVACGILVVTGTLSTAAGPHPGDSAEIDRFWNLLDAVWWHVRATAAFGLSFLILVAWLVRERGRVPGLVRATGVLLALLLLQMGVGEIQFRNQLPWWLVLVHVGLAAAVW 285
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: A0A7V9L0W5_9ACTN (COX15/CtaA family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9L0W5_9ACTN) HSP 1 Score: 107 bits (267), Expect = 5.630e-25 Identity = 73/170 (42.94%), Postives = 105/170 (61.76%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRER-GWEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIALVVLAGVLVAWVAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLG +TV+ LHP+AV +HFLL++ A+ ++A+GA ++ GR R G G LA + A V+ TG +VTAAGPHSG D+ R G+++ AV +HVRA V VLVA V R G L + + + L L+ LQ+ +GE Q+R+ LPW +V+VHV+ A +W
Sbjct: 122 PLGGLTVILELHPVAVMAHFLLALAAVALAVVVALGADEFARGRRRAGVSPWVGRLALGLVPVALVLVVTGALVTAAGPHSGGADIE-RLGNIVDAVYIHVRATAVFGVGFLVLVALVFRSGA--PLESVIAGVVLALLVLQMVVGEVQWRNQLPWWLVLVHVALAVSVW 288
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: A0A7V8YV66_9ACTN (COX15/CtaA family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8YV66_9ACTN) HSP 1 Score: 107 bits (266), Expect = 6.290e-25 Identity = 76/175 (43.43%), Postives = 98/175 (56.00%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRER------GWEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIALVVLAGVLVAWVAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLG +T+ LHPL VG+HFLL++V L +LAI A W R R W RGV A + +S V+ TG + TAAGPH GD RF +LL AV HVRA A + VL AW+ RE + RL L L+ LQ+ +GE Q+R+ LPW +V+VHV A +W
Sbjct: 116 PLGLLTIRLDLHPLMVGTHFLLALVVLAGAVVLAIEA--WANARGRVDSPLPSW--LRGV-ALVLVVSCGVLVVTGTLSTAAGPHPGDSAEIDRFWNLLDAVWWHVRATAAFGLSFLVLAAWLVRERRLVPGLIRLAGGLLALLALQMAVGEIQFRNQLPWWLVLVHVGLAAAVW 285
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: A0A7W1LG62_9ACTN (COX15/CtaA family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W1LG62_9ACTN) HSP 1 Score: 104 bits (259), Expect = 6.860e-24 Identity = 72/173 (41.62%), Postives = 95/173 (54.91%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRERG----WEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIALVVLAGVLVAWVAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLG +T+ LHPL VG+HFLL++V L LA+ A GR W +A + ++ ++ TG + TAAGPH GD RF +LL AV HVRA + +L AWV RE R TA+ L L+ LQ+GIGE QYR+ LPW +V+VHV A +W
Sbjct: 118 PLGLLTIRLDLHPLMVGTHFLLALVVLAGAVALAMEAWGNAHGRVDSPVPPWLR---AVALVLVIACGILVVTGTLSTAAGPHPGDSAEIDRFWNLLDAVWWHVRATAVFGLSFLILAAWVVRERRRVPGLGRGTAVLLGLLLLQMGIGEIQYRNQLPWWLVLVHVGLAAAVW 287
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: A0A7Y5X0V8_9ACTN (Heme A synthase n=1 Tax=Thermoleophilia bacterium TaxID=2026888 RepID=A0A7Y5X0V8_9ACTN) HSP 1 Score: 103 bits (257), Expect = 9.800e-24 Identity = 72/169 (42.60%), Postives = 93/169 (55.03%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRERGWEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIALVVLAGVLVAWVAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLGA+TV GL+P V SHFLLS+V L G +LA+ R W R G+L VA + AV+ +G + TAAGPH G V R AV HVRA + VL+ W+ R G R + L L+G+Q+ IGE QYR LPW +V+VHV+TA +W
Sbjct: 112 PLGALTVHFGLNPWLVLSHFLLSVVVLTLGVVLALEVRGRERTRLPAWVPRLGLL---VAAAGAVLVVSGTLATAAGPHPGST-VVRRLWSFEPAVYWHVRATAVFGIAFLVLLVWLVRHGAPQ---VRGALVLLGLLGVQMAIGETQYRTHLPWWLVLVHVATAVTVW 273
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: A0A7V8XNW0_9ACTN (COX15/CtaA family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8XNW0_9ACTN) HSP 1 Score: 100 bits (248), Expect = 2.650e-22 Identity = 68/173 (39.31%), Postives = 93/173 (53.76%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRERG----WEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIALVVLAGVLVAWVAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLG +T+ LHPL VG+HFLL+++ L LA+ A GR W + VL + ++ V+ TG + TAAGPH GD RF LL AV HVRA + +L+AW+ RE R L L+ LQ+G+GE Q+R+ LPW +V+VHV A +W
Sbjct: 116 PLGLLTIRLDLHPLMVGTHFLLALLVLAGAVALAVEAWGNARGRVESPAPPWLRKVAVL---LVVACGVLVVTGTLSTAAGPHPGDSAEIDRFWHLLDAVWWHVRATAVFGLSFLLLIAWLVRERRRAPGLVRAMLGLLALLVLQMGVGEIQFRNQLPWWLVLVHVGLAAAVW 285
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: A0A7M2Z0D8_9ACTN (Cytochrome oxidase assembly protein n=1 Tax=Gaiella occulta TaxID=1002870 RepID=A0A7M2Z0D8_9ACTN) HSP 1 Score: 95.5 bits (236), Expect = 1.940e-20 Identity = 73/178 (41.01%), Postives = 94/178 (52.81%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRER----GWEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFGDLLLAVEVHVRAAIAL---VVLAGVLVAWVAREG--GVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLG VTVL LHPLAV SHFLL+++ L ++A+ A G GW RR L G A + VV TG V TA+GPHSG D+ + V VHVRA V++ GV + W R G+ RL L + + +Q +GE QYR LPW +VV+HVS A +W
Sbjct: 133 PLGGVTVLLELHPLAVMSHFLLALLVLAGAIVVALEAWAGPVGPAPPVGPGW-LRRAALVGVAACAVLVV--TGAVATASGPHSGGRDIRRLGLGISDTVYVHVRATAVFGIGVLVVGVFL-WRLRHNYPGIARLALGLVGVLV----VQAAVGEIQYRSALPWWLVVIHVSLAATIW 302
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Match: A0A7V9BDD2_9ACTN (COX15/CtaA family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9BDD2_9ACTN) HSP 1 Score: 91.7 bits (226), Expect = 4.890e-19 Identity = 68/177 (38.42%), Postives = 98/177 (55.37%), Query Frame = 1
Query: 1 PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRERG------WEARRGVLAGAVALSAAVVXSTGVVVTAAGPHSGDDDVTTRFG-DLLLAVEVHVRAAIALVVLAGVLVAW-VAREGGVDRLTARLTAIALPLVGLQIGIGEYQYRHGLPWQVVVVHVSTAGLLW 507
PLG +TV+ LHPLAV +HFLL++V + ++A+ A W R G W R + G VA A VV TG + TA+GPH G D+ R G ++ V VHVRA A+ + +LV W + R RL + L ++ Q+ +GE QYR+ LPW +V++HV+ A +W
Sbjct: 114 PLGGLTVILDLHPLAVMTHFLLALVVVALSVVVALEA--WSHARGLGEPVAPRW-LRLVAVVGVVACGAMVV--TGAIATASGPHPGADEDVARLGLEISDTVYVHVRAT-AVFGIGFLLVGWQLLRVRRAVPGVLRLAGVLLAVLVAQMLVGEIQYRNALPWGLVLIHVTLAAAIW 284 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58005.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig58005.1.1 >prot_P-wetherbeei_contig58005.1.1 ID=prot_P-wetherbeei_contig58005.1.1|Name=mRNA_P-wetherbeei_contig58005.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp PLGAVTVLSGLHPLAVGSHFLLSMVALMCGTLLAIGALDWRAGRERGWEAback to top mRNA from alignment at P-wetherbeei_contig58005:1..507+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig58005.1.1 ID=mRNA_P-wetherbeei_contig58005.1.1|Name=mRNA_P-wetherbeei_contig58005.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig58005:1..507+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig58005:1..507+ >mRNA_P-wetherbeei_contig58005.1.1 ID=mRNA_P-wetherbeei_contig58005.1.1|Name=mRNA_P-wetherbeei_contig58005.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig58005:1..507+ (Phaeothamnion wetherbeei SAG_119_79)back to top |