mRNA_P-wetherbeei_contig580.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig580.1.1
Unique NamemRNA_P-wetherbeei_contig580.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: D7FLP7_ECTSI (Enoyl-CoA hydratase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLP7_ECTSI)

HSP 1 Score: 268 bits (684), Expect = 2.050e-86
Identity = 147/256 (57.42%), Postives = 183/256 (71.48%), Query Frame = 1
Query:    1 QLDGELKGVTKIILNRPRGNLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGEALNRALEIAGKIAANGPAALLWAKEAVDRGMQC-DLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            +LDG+LKGV ++ +  P+ N L    + +L ++V+ V  D ++R++V  S V GVFCAGADLKERA M + E   FV  LRSLM  ++SIP PTI V EGAAFGGGLELMLACD+RV  GAKA MGLTETSLGIIPGAGGTQRLPRLIG ++AKE+IF A RV A RA ++G+VN     G+A   AL +AG +A  GP A+  AK A+D G+   D+  GMA+E   Y RV+GT DR EGL AFQE+R P FTG+
Sbjct:    6 RLDGDLKGVVRLEMKNPKANALGLKLISELEDAVEAVSRDGSVRSVVLSSGVPGVFCAGADLKERAVMTKPEAELFVVRLRSLMSKVASIPAPTIAVAEGAAFGGGLELMLACDVRVV-GAKATMGLTETSLGIIPGAGGTQRLPRLIGASKAKELIFTARRVDAVRALELGMVNAVFDAGQAEKGALAMAGDMARRGPLAVRAAKLAIDEGLAMEDVEQGMAIERRLYARVLGTKDRDEGLAAFQERRPPEFTGE 260          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: A0A0L0G399_9EUKA (Uncharacterized protein n=1 Tax=Sphaeroforma arctica JP610 TaxID=667725 RepID=A0A0L0G399_9EUKA)

HSP 1 Score: 263 bits (673), Expect = 2.700e-84
Identity = 140/255 (54.90%), Postives = 185/255 (72.55%), Query Frame = 1
Query:    4 LDGELKGVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGEALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            L+GE +G+T + LNRP+G N LS+ F+++++E    ++FD ++R +V  SA+  VFCAGADLKERATM E EV +F+  LR    +I ++P PTI    GAA GGGLEL LACDLRVA G ++ +GL ET L IIPGAGGTQRLPR IGV +AKE+IF  + ++AE+AEQIGL+  AV EG+ L++ALE+A  I   GP AL  AK+A+ +G + +   GMA+E  CY +VI T DR EGL AF+EKRKPV+ GK
Sbjct:   39 LEGENEGITVLTLNRPKGMNSLSRKFLQEIKEHADAIRFDQSVRVVVLKSALEKVFCAGADLKERATMSETEVSEFLYKLRGTFTEIENLPMPTIACINGAALGGGLELALACDLRVA-GPRSKLGLPETRLAIIPGAGGTQRLPRTIGVPKAKELIFTGKILTAEKAEQIGLITEAVTEGDPLDKALELARNILPAGPVALRMAKQAISQGSEVEQAVGMAIEQACYAQVIPTQDRTEGLTAFREKRKPVYIGK 292          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: A0A7S2R7R1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R7R1_9STRA)

HSP 1 Score: 258 bits (660), Expect = 2.190e-82
Identity = 142/249 (57.03%), Postives = 176/249 (70.68%), Query Frame = 1
Query:   22 GVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGEALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            GVT + L+RP   N + K+ + +L      ++ D + R +V  S V  VFCAGADLKERATMPE +VG FV  +R     +  +P PTI   EGAA GGGLEL LACDLRVA GA A +GL ETSL I+PGAGGTQRLPR IG+ +AKE+IF AERVSA+RAE IGLVN+AV  G AL +A+EI+ KI ANGP  +  AK+AV  GMQ D+  GM +E  CY +VI + DR+EGL AF+EKRKP +TG+
Sbjct:   41 GVTVVTLDRPAAKNAIGKNMLSELASVFDYLRDDRSTRVLVLQSGVERVFCAGADLKERATMPESQVGPFVEKIRRTFTALEQLPMPTIAAIEGAAVGGGLELALACDLRVA-GADAKLGLPETSLAILPGAGGTQRLPRTIGIPKAKELIFTAERVSAQRAEDIGLVNHAVEAGAALAKAMEISEKIKANGPLGVSLAKKAVMTGMQADISTGMDIERACYAQVIKSKDRLEGLAAFREKRKPEYTGE 288          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: A0A8K1FA98_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FA98_PYTOL)

HSP 1 Score: 258 bits (660), Expect = 3.020e-82
Identity = 134/255 (52.55%), Postives = 181/255 (70.98%), Query Frame = 1
Query:    4 LDGELKGVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGEALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            LDGE +GV    ++RP   N L K  + + RE++  V+FDT +R +V  S V+ VFCAGADLKER  M   E    V  LRS   ++  +P PTI   EGAA GGGLE+ +ACD R+A GAKA++G  ETSL IIPGAGGTQRLPRL+G+++AKE+I+ + R+ +  AE+IGLV+YAVP  +ALN+ALE+A +I  NGP  +  AKEA+ +G++ DL  GM++E  CY +VI T DR+EGL+AF+EKRKP + G+
Sbjct:   45 LDGEHEGVALFTMSRPEARNALGKQMMIEFREAMDQVRFDTNVRVVVLQSTVDKVFCAGADLKERIKMTPQEAAATVFGLRSAFTELEQLPMPTIAAIEGAALGGGLEMAMACDFRIA-GAKAILGCPETSLAIIPGAGGTQRLPRLVGLSKAKELIYTSRRIDSMAAERIGLVDYAVPHSDALNKALELAREILPNGPIGVRMAKEAITKGLEVDLATGMSIERACYAQVIPTKDRMEGLQAFKEKRKPSYKGE 298          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: A0A024UCG3_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UCG3_9STRA)

HSP 1 Score: 257 bits (656), Expect = 8.560e-82
Identity = 133/256 (51.95%), Postives = 182/256 (71.09%), Query Frame = 1
Query:    1 QLDGELKGVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGEALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            +L G+L+GV  + ++RP   N L K  ++++RE++  V+FDT +R +V  S V+ VFCAGADLKER  M   E    V  LRS   ++  +P PTI   EGAA GGGLE+ LACD R+A G+KA++G  ET L I+PGAGGTQRLPRL+G+++AKE+IF A ++ +  AE+IGLV+YAV    AL++A E+A +I  NGP  +  AKEA+ +GM+ DL  GMA+E  CY +VI T DR+EGL+AFQEKRKPV+ G+
Sbjct:   33 RLTGDLEGVALLTMSRPAARNALGKQMMREMREAMDSVRFDTKVRVVVLQSTVDRVFCAGADLKERIKMTPEEAAATVFGLRSAFTELEQLPMPTIAAIEGAALGGGLEMALACDFRIA-GSKALLGTPETGLAILPGAGGTQRLPRLVGLSKAKELIFTARKIDSVTAERIGLVDYAVEANTALDKAFELAKEILPNGPIGVRCAKEAITKGMEVDLASGMAIERACYAQVIPTKDRLEGLKAFQEKRKPVYKGE 287          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: A0A6P5KD60_PHACI (enoyl-CoA hydratase domain-containing protein 2, mitochondrial n=4 Tax=Metatheria TaxID=9263 RepID=A0A6P5KD60_PHACI)

HSP 1 Score: 257 bits (657), Expect = 8.860e-82
Identity = 137/253 (54.15%), Postives = 182/253 (71.94%), Query Frame = 1
Query:   22 GVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGE----ALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            G+T+I++NRP+  N L K FV +L +++  ++ D ++R +VF S+V GVFCAGADLKER  M E EV  FV  LRSLM  I++ P PTI   +G A GGGLEL LACDLRVAA + A+MGL ETS G++PGAGGTQRLPR +GV+ AKE+IF   R+S E A+ IGLVN+AVP+ +    A +RALE+A +I    P A+   K A+D+GM+ D+  GMA+EG+CY + I T DR+EG+ AF+EKR P F G+
Sbjct:   48 GITEILMNRPQARNALGKVFVSELSDALDELRLDRSIRVVVFKSSVKGVFCAGADLKEREQMNEAEVAAFVHKLRSLMSQIATFPAPTIAAIDGFALGGGLELALACDLRVAA-SSAIMGLIETSRGLLPGAGGTQRLPRCVGVSLAKELIFTGRRISGEEAKSIGLVNHAVPQNQEGTAAYHRALELAREIVPQAPFAVRMGKVAIDKGMEVDIASGMAIEGMCYAQNIPTRDRLEGMAAFREKRPPHFVGE 299          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: UPI0018903D46 (enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform X1 n=2 Tax=Talpa occidentalis TaxID=50954 RepID=UPI0018903D46)

HSP 1 Score: 256 bits (653), Expect = 3.350e-81
Identity = 139/259 (53.67%), Postives = 181/259 (69.88%), Query Frame = 1
Query:    4 LDGELKGVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGE----ALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            L G  +G+T+I++NRPR  N L   FV +L E++  ++ D  +R ++F SAV GVFCAGADLKER  M E EVG FV  LR LM +I++ P PTI   +G A GGGLEL LACDLRVAA + AVMGL ET+ G++PGAGGTQRLPR +GVA AKE+IF   R+S  +A+ +GLVN+AVP+ E    A +RA  +A +I    P A+   K A+D+GM+ D+  GM +EGLCY + I T DR+EG+ AF+EKR P F GK
Sbjct:   39 LTGPDQGITEILMNRPRARNALGNVFVSELLEALAQLREDQQVRVLLFRSAVKGVFCAGADLKEREQMSETEVGVFVQRLRGLMNEIAAFPAPTIAAMDGFALGGGLELALACDLRVAAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGMQAQALGLVNHAVPQNEEGNAAYHRARALAQEILPQAPIAVRLGKVAIDQGMEVDIASGMVIEGLCYAQNIPTQDRLEGMAAFREKRPPKFVGK 297          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: UPI001CF0C53D (enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform X1 n=7 Tax=Mustelidae TaxID=9655 RepID=UPI001CF0C53D)

HSP 1 Score: 254 bits (650), Expect = 9.510e-81
Identity = 139/259 (53.67%), Postives = 180/259 (69.50%), Query Frame = 1
Query:    4 LDGELKGVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGE----ALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            L G  +G+T+I++NRP   N L    V QL E++  ++ D  +R ++F S V GVFCAGADLKER  M E EVG FV  LR LM +I++ P PTI   +G A GGGLEL LACDLRVAA + AVMGL ET+ G++PGAGGTQRLPR +GVA AKE+IF   R+S  +A+ +GLVN+AV + E    A +RALE+A +I    P A+   K A+DRGM+ D+  GMA+EG+CY + I T DR+EG+ AF+EKR P F GK
Sbjct:   39 LTGRDQGITEILMNRPSARNALGNVLVSQLLEALAQLREDQQVRVLLFRSGVKGVFCAGADLKEREQMSEAEVGIFVQRLRGLMNEIAAFPAPTIAAMDGFALGGGLELALACDLRVAAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGAQAQALGLVNHAVSQNEEGNAAYHRALELAQEILPQAPIAVRLGKVAIDRGMEVDIASGMAIEGICYAQNIPTQDRLEGMAAFREKRPPRFVGK 297          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: UPI000443189B (enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform X1 n=4 Tax=Didelphinae TaxID=126287 RepID=UPI000443189B)

HSP 1 Score: 254 bits (649), Expect = 1.300e-80
Identity = 137/253 (54.15%), Postives = 178/253 (70.36%), Query Frame = 1
Query:   22 GVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGE----ALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            G+T+I++NRP   N L K FV QL +++  ++ D ++R +VF S V GVFCAGADLKER  M E EV  FV  LR+LM  I++ P PTI   +G A GGGLEL LACDLRVAA + AVMGL ET+ G++PGAGGTQRLPR +GV  AKE+IF   R+S E A+ IGLVN+AVP+ +    A  R+LE+A +I    P A+   K A+DRGM+ D+  GMA+EG+CY + I T DR+EG+ AF+EKR P F G+
Sbjct:   45 GITEILMNRPHTRNALGKVFVSQLSDALDELRLDRSVRVVVFKSCVQGVFCAGADLKEREQMSEPEVAAFVHKLRALMNQIATFPAPTIAALDGFALGGGLELALACDLRVAA-SSAVMGLIETTRGLLPGAGGTQRLPRCVGVGLAKELIFTGRRISGEEAKAIGLVNHAVPQDQEGTAAYRRSLELAREIVPQAPIAVRMGKVAIDRGMEVDISSGMAIEGMCYAQNIPTRDRLEGMAAFREKRPPRFVGE 296          
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Match: A0A6P3R610_PTEVA (enoyl-CoA hydratase domain-containing protein 2, mitochondrial isoform X1 n=10 Tax=Pteropus TaxID=9401 RepID=A0A6P3R610_PTEVA)

HSP 1 Score: 254 bits (649), Expect = 1.350e-80
Identity = 140/259 (54.05%), Postives = 181/259 (69.88%), Query Frame = 1
Query:    4 LDGELKGVTKIILNRPRG-NLLSKDFVKQLRESVQLVQFDTTMRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPKPTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQRLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGE----ALNRALEIAGKIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLRAFQEKRKPVFTGK 765
            L G  +G+T+II+NRP   N L K  V +L E+V  ++ D  +R ++F S V GVFCAGADLKER  M E EVG FV  LR LM +I++ P PTI   +G A GGGLEL LACDLRVAA + AVMGL ET+ G++PGAGGTQRLPR +GVA AKE+IF   R+S E+A+ + LVN+AV + E    A +RA E+A +I    P A+  +K A+DRGM+ D+  GMA+EG+CY + I T DR+EG+ AF+EKR P F GK
Sbjct:   39 LAGRDQGITEIIMNRPHARNALGKVLVSELLEAVAQLREDRQVRVLLFRSGVKGVFCAGADLKEREQMNEVEVGVFVQRLRGLMDEIAAFPVPTIAAVDGFALGGGLELALACDLRVAAASSAVMGLIETTRGLLPGAGGTQRLPRCLGVALAKELIFTGRRLSGEQAQALRLVNHAVAQNEEGNAAYHRARELAQEILPQAPTAVRLSKVAIDRGMEVDIASGMAIEGICYAQNIPTRDRLEGMAAFKEKRPPRFVGK 297          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig580.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FLP7_ECTSI2.050e-8657.42Enoyl-CoA hydratase n=2 Tax=Ectocarpus TaxID=2879 ... [more]
A0A0L0G399_9EUKA2.700e-8454.90Uncharacterized protein n=1 Tax=Sphaeroforma arcti... [more]
A0A7S2R7R1_9STRA2.190e-8257.03Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A8K1FA98_PYTOL3.020e-8252.55Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A024UCG3_9STRA8.560e-8251.95Uncharacterized protein n=2 Tax=Aphanomyces invada... [more]
A0A6P5KD60_PHACI8.860e-8254.15enoyl-CoA hydratase domain-containing protein 2, m... [more]
UPI0018903D463.350e-8153.67enoyl-CoA hydratase domain-containing protein 2, m... [more]
UPI001CF0C53D9.510e-8153.67enoyl-CoA hydratase domain-containing protein 2, m... [more]
UPI000443189B1.300e-8054.15enoyl-CoA hydratase domain-containing protein 2, m... [more]
A0A6P3R610_PTEVA1.350e-8054.05enoyl-CoA hydratase domain-containing protein 2, m... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig580contigP-wetherbeei_contig580:867..2733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FLP7
PFAMsECH_1
Model size858
Max annot lvl2759|Eukaryota
KEGG rclassRC02416
KEGG koko:K05607
KEGG ReactionR02085
KEGG Pathwayko00280,ko01100,map00280,map01100
KEGG ModuleM00036
Hectar predicted targeting categorysignal peptide
Exons5
Evalue2.24e-76
EggNOG OGsCOG1024@1|root,KOG1679@2759|Eukaryota
Ec32 ortholog descriptionenoyl-CoA hydratase
Ec32 orthologEc-17_000320.1
EC4.2.1.18
Descriptionmethylglutaconyl-CoA hydratase activity
Cds size642
COG categoryI
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig580.1.1prot_P-wetherbeei_contig580.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig580 1241..2643 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186859.675547-UTR-P-wetherbeei_contig580:866..9531683186859.675547-UTR-P-wetherbeei_contig580:866..953Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig580 867..953 +
1683186859.6856-UTR-P-wetherbeei_contig580:1201..12401683186859.6856-UTR-P-wetherbeei_contig580:1201..1240Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig580 1202..1240 +
1683186859.7340388-UTR-P-wetherbeei_contig580:2643..27331683186859.7340388-UTR-P-wetherbeei_contig580:2643..2733Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig580 2644..2733 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186859.6935482-CDS-P-wetherbeei_contig580:1240..14691683186859.6935482-CDS-P-wetherbeei_contig580:1240..1469Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig580 1241..1469 +
1683186859.704058-CDS-P-wetherbeei_contig580:1644..17741683186859.704058-CDS-P-wetherbeei_contig580:1644..1774Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig580 1645..1774 +
1683186859.7143095-CDS-P-wetherbeei_contig580:2026..22301683186859.7143095-CDS-P-wetherbeei_contig580:2026..2230Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig580 2027..2230 +
1683186859.7260985-CDS-P-wetherbeei_contig580:2564..26431683186859.7260985-CDS-P-wetherbeei_contig580:2564..2643Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig580 2565..2643 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig580.1.1

>prot_P-wetherbeei_contig580.1.1 ID=prot_P-wetherbeei_contig580.1.1|Name=mRNA_P-wetherbeei_contig580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=214bp
MRAIVFCSAVNGVFCAGADLKERATMPEHEVGQFVGTLRSLMLDISSIPK
PTIVVTEGAAFGGGLELMLACDLRVAAGAKAVMGLTETSLGIIPGAGGTQ
RLPRLIGVARAKEMIFAAERVSAERAEQIGLVNYAVPEGEALNRALEIAG
KIAANGPAALLWAKEAVDRGMQCDLHGGMAVEGLCYNRVIGTADRVEGLR
AFQEKRKPVFTGK*
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mRNA from alignment at P-wetherbeei_contig580:867..2733+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig580.1.1 ID=mRNA_P-wetherbeei_contig580.1.1|Name=mRNA_P-wetherbeei_contig580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1867bp|location=Sequence derived from alignment at P-wetherbeei_contig580:867..2733+ (Phaeothamnion wetherbeei SAG_119_79)
CAACTAGACGGAGAGCTTAAAGGCGTAACGAAAATCATTTTGAATCGACC AAGAGGGAATTTGCTCAGCAAAGACTTTGTCAAACAGGTGCGCCTCTCGT GATTGGCTTGTTCACTTTACAATCCCTTTCCTTGCATTGAACTGTGCATA TGTTCGACCACAGTTGAATCTTTTCTTGTTCTCACGTGCATTCCCGTGTG CAAACCAATAAGGTGGGTCTCTCAATTAGTTGGCTTGTCCTCCCATTAGC AATGTCTTTCACTGGGCCGCATTGTGTTGTACGTTCAACCAGTGCTTAAG CTTGAACAATCCTCACCTTCCTATTGCATTTGCAGCTTAGGGAAAGCGTG CAACTTGTACAATTCGACACAACAATGCGCGCCATCGTCTTCTGCAGCGC CGTCAATGGCGTCTTTTGCGCCGGCGCCGACCTGAAGGAGCGCGCCACCA TGCCCGAGCACGAGGTGGGCCAATTTGTCGGGACGCTCAGGTCTCTGATG CTCGACATCAGCAGCATCCCCAAGCCCACCATCGTCGTAACGGAAGGCGC GGCGTTCGGCGGCGGCTTGGAGCTGATGCTCGCGTGCGACCTACGCGTGG CAGGTGTGTTGGAGGGAAAATAAGGCGAGAGGAGGGTCGTGAATTACCCC GGATTAGCATCCAGGTTTGCTTCGGCATGCTGTTTCCGGTGTTGCTTATT TCTAACGATAACGGCCGCTAGAGAATTCAACTTCGATGCAAAGATTGAAA AAGAAATTCGGGCTTTTTTTAAATGGAGCAGGAGCCAAAGCGGTCATGGG CTTGACAGAGACGAGCCTTGGTATCATCCCCGGTGCCGGCGGGACGCAGC GGCTGCCGCGGCTCATCGGTGTGGCGCGGGCGAAGGAGATGATCTTCGCC GCCGAGCGGTATGCGTGGATCTGCGCCGTGCAAGACAGCTTTGCGCTCTA ATCATCTCAGTTCGCCTCTGATTTATTGATGACAATTGTGTGGCCCTCGC TCTTGCATTGCCCGTTGCCTCCTCCTTTTGATCTTCAGCGGTCCCTTGCC GAATGCTGTCATCATGGGAAAGGCTGAAACCGTCGCCGTTCTATCTTTTT CCCTGGCTCAGGCCCGTACCGATATCTATCCCCTGGCCGATCATGCAATA AAACGCTCAGGGTGTCTGCGGAGCGTGCCGAGCAGATCGGCCTCGTAAAT TACGCCGTGCCGGAGGGCGAGGCGCTAAACCGGGCGCTCGAAATCGCGGG CAAGATCGCAGCGAACGGGCCGGCGGCGCTGCTGTGGGCGAAAGAGGCGG TCGACCGCGGCATGCAGTGCGATCTGCACGGCGGAATGGCCGTCGAGGGG CTCTGCTACAACCGGTGAGATGCGGAAGAACGTTGGAGCGGGCTTTTGAG GGGAGAGGTTGTCAGTCCGACCTTCCTTTTGTCTGCTTTTTGCTCTTTTG AAGTGCAGGATTTCTGGTTTGGCGCCGCGCTGTGACTTTACTTAGCAATC CTAGTGGTCCTATTTTTCAATGCGTTTTCTCCAAGAGTGCGCCCCTTAAT GGCGTGCTCTAACAGACTGGTTAGAAGAGGGAAGTCCGTTCTTAGAATTA GTCTCTTTCCTGGCTGTTGATCGGCACGTTGTGTCGGCTGATCTCTGCCT TCTGCTCCTCGGCGTCGTCTCGTCCCGTTTCAATTTCGCTTGCCTCAGGG TGATCGGCACGGCGGACCGCGTCGAGGGGCTTCGGGCATTTCAAGAAAAG CGAAAGCCCGTGTTTACCGGAAAGTAGGTGATGTAGTTTAGTTGGTAGAG AGATGCAAGACGTTAGAGGATTGCGCACGTTTAGAGACAAGGCTCCTTAC GGCAAGAAACGTGTCTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig580:867..2733+

>mRNA_P-wetherbeei_contig580.1.1 ID=mRNA_P-wetherbeei_contig580.1.1|Name=mRNA_P-wetherbeei_contig580.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=642bp|location=Sequence derived from alignment at P-wetherbeei_contig580:867..2733+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCGCCATCGTCTTCTGCAGCGCCGTCAATGGCGTCTTTTGCGCCGG
CGCCGACCTGAAGGAGCGCGCCACCATGCCCGAGCACGAGGTGGGCCAAT
TTGTCGGGACGCTCAGGTCTCTGATGCTCGACATCAGCAGCATCCCCAAG
CCCACCATCGTCGTAACGGAAGGCGCGGCGTTCGGCGGCGGCTTGGAGCT
GATGCTCGCGTGCGACCTACGCGTGGCAGCAGGAGCCAAAGCGGTCATGG
GCTTGACAGAGACGAGCCTTGGTATCATCCCCGGTGCCGGCGGGACGCAG
CGGCTGCCGCGGCTCATCGGTGTGGCGCGGGCGAAGGAGATGATCTTCGC
CGCCGAGCGGGTGTCTGCGGAGCGTGCCGAGCAGATCGGCCTCGTAAATT
ACGCCGTGCCGGAGGGCGAGGCGCTAAACCGGGCGCTCGAAATCGCGGGC
AAGATCGCAGCGAACGGGCCGGCGGCGCTGCTGTGGGCGAAAGAGGCGGT
CGACCGCGGCATGCAGTGCGATCTGCACGGCGGAATGGCCGTCGAGGGGC
TCTGCTACAACCGGGTGATCGGCACGGCGGACCGCGTCGAGGGGCTTCGG
GCATTTCAAGAAAAGCGAAAGCCCGTGTTTACCGGAAAGTAG
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