mRNA_P-wetherbeei_contig58.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig58.5.1
Unique NamemRNA_P-wetherbeei_contig58.5.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: T0QQL0_SAPDV (DUF4201 domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QQL0_SAPDV)

HSP 1 Score: 155 bits (393), Expect = 1.350e-45
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR++AR++EN+RTGKPIP RI++  E AE KK+ +VEKVRLKNINLR  LRKLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK TTTVQV
Sbjct:   24 FKREVARSAENTRTGKPIPKRIIAQFEVAEVKKDQEVEKVRLKNINLRTHLRKLEAQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTTTVQV 130
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: A0A067CB44_SAPPC (DUF4201 domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CB44_SAPPC)

HSP 1 Score: 155 bits (393), Expect = 4.910e-45
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR++AR++EN+RTGKPIP RI++  E AE KK+ +VEKVRLKNINLR  LRKLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK TTTVQV
Sbjct:  118 FKREVARSAENTRTGKPIPKRIIAQFEVAEVKKDQEVEKVRLKNINLRTHLRKLEAQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTTTVQV 224
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: A0A1V9ZBI1_9STRA (DUF4201 domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZBI1_9STRA)

HSP 1 Score: 156 bits (395), Expect = 8.520e-45
Identity = 86/107 (80.37%), Postives = 95/107 (88.79%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR++AR++EN+RTGKPIP RIV+  EAAE KK+ +VEKVRLKNINLR  LRKLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK TTTVQV
Sbjct:  120 FKREVARSAENTRTGKPIPKRIVAQFEAAEIKKDQEVEKVRLKNINLRTHLRKLEQQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTTTVQV 226
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: A0A6G0WC92_9STRA (DUF4201 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WC92_9STRA)

HSP 1 Score: 156 bits (394), Expect = 1.420e-44
Identity = 85/107 (79.44%), Postives = 95/107 (88.79%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR++AR++EN+RTGKPIP RI++  EAAE KK+ +VEKVRLKNINLR  LRKLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK TTTVQV
Sbjct:  122 FKREVARSAENTRTGKPIPKRIITQFEAAELKKDQEVEKVRLKNINLRTHLRKLEQQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTTTVQV 228
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: A0A485L1W7_9STRA (Aste57867_14260 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L1W7_9STRA)

HSP 1 Score: 154 bits (390), Expect = 5.780e-44
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR++AR++EN+RTGKPIP RI++  E AE KK+ +VEKVRLKNINLR  LRKLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK TTTVQV
Sbjct:  122 FKREVARSAENTRTGKPIPKRIIAQFEVAEMKKDQEVEKVRLKNINLRTHLRKLEQQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTTTVQV 228
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: A0A8K1CBS3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CBS3_PYTOL)

HSP 1 Score: 154 bits (390), Expect = 8.010e-44
Identity = 84/107 (78.50%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR+IA+N+EN RTGKPIP R++S  EAAE KK+ +VEKVRLKNINLR  L+KLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK T+TVQV
Sbjct:  139 FKREIAKNAENMRTGKPIPARVISQFEAAELKKDQEVEKVRLKNINLRTHLKKLEQQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTSTVQV 245
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: W4HB69_9STRA (DUF4201 domain-containing protein n=3 Tax=Aphanomyces TaxID=100860 RepID=W4HB69_9STRA)

HSP 1 Score: 154 bits (389), Expect = 8.160e-44
Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR++AR++EN+RTGKPIP R+++  E AE KK+ +VEKVRLKNINLR  LRKLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK TTTVQV
Sbjct:  120 FKREVARSAENTRTGKPIPKRVIAQFEVAEMKKDQEVEKVRLKNINLRTHLRKLEQQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTTTVQV 226
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: A0A2D4C854_PYTIN (DUF4201 domain-containing protein n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C854_PYTIN)

HSP 1 Score: 153 bits (386), Expect = 3.620e-43
Identity = 83/107 (77.57%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR+IA+N+EN RTGKPIP R+++  E+AE KK+ +VEKVRLKNINLR  LRKLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK T+TVQV
Sbjct:  139 FKREIAKNAENMRTGKPIPNRVIAQFESAELKKDQEVEKVRLKNINLRTHLRKLEQQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTSTVQV 245
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: A0A5D6Y597_9STRA (DUF4201 domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y597_9STRA)

HSP 1 Score: 152 bits (383), Expect = 6.590e-43
Identity = 82/107 (76.64%), Postives = 93/107 (86.92%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR+IA+N+EN RTGKPIP R++   EAA+ KK+ +VEKVRLKNINLR  L+KLE QL AKEQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK T+TVQV
Sbjct:  129 FKREIAKNAENMRTGKPIPKRVIGQFEAADLKKDQEVEKVRLKNINLRTHLKKLEQQLHAKEQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTSTVQV 235
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BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Match: K3WVZ3_GLOUD (DUF4201 domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVZ3_GLOUD)

HSP 1 Score: 150 bits (379), Expect = 2.790e-42
Identity = 81/107 (75.70%), Postives = 94/107 (87.85%), Query Frame = 1 
Query:    7 FKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLRLTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLRKKNTTTVQV 327
            FKR+IA+N+E+ RTGKPIP R++S  EAA+ KK+ +VEKVRLKNINLR  L+KLE QL A+EQLAEGLHLIDFEQLKIENQTLN+KIEER EEL KLRKK T+TVQV
Sbjct:  129 FKREIAKNAESMRTGKPIPKRVISQFEAADLKKDQEVEKVRLKNINLRTHLKKLEQQLHAREQLAEGLHLIDFEQLKIENQTLNEKIEERNEELHKLRKKTTSTVQV 235
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig58.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
T0QQL0_SAPDV1.350e-4578.50DUF4201 domain-containing protein n=1 Tax=Saproleg... [more]
A0A067CB44_SAPPC4.910e-4578.50DUF4201 domain-containing protein n=1 Tax=Saproleg... [more]
A0A1V9ZBI1_9STRA8.520e-4580.37DUF4201 domain-containing protein n=1 Tax=Achlya h... [more]
A0A6G0WC92_9STRA1.420e-4479.44DUF4201 domain-containing protein n=1 Tax=Aphanomy... [more]
A0A485L1W7_9STRA5.780e-4478.50Aste57867_14260 protein n=1 Tax=Aphanomyces stella... [more]
A0A8K1CBS3_PYTOL8.010e-4478.50Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
W4HB69_9STRA8.160e-4477.57DUF4201 domain-containing protein n=3 Tax=Aphanomy... [more]
A0A2D4C854_PYTIN3.620e-4377.57DUF4201 domain-containing protein n=2 Tax=Pythium ... [more]
A0A5D6Y597_9STRA6.590e-4376.64DUF4201 domain-containing protein n=1 Tax=Pythium ... [more]
K3WVZ3_GLOUD2.790e-4275.70DUF4201 domain-containing protein n=1 Tax=Globispo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig58contigP-wetherbeei_contig58:13332..13885 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog112098.XP_008609792.1
Preferred nameCCDC96
PFAMsDUF4201
Model size336
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.21e-46
EggNOG OGs28MPJ@1|root,2QS75@2759|Eukaryota
DescriptionDomain of unknown function (DUF4201)
Cds size336
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186859.5930889-CDS-P-wetherbeei_contig58:13331..135441683186859.5930889-CDS-P-wetherbeei_contig58:13331..13544Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58 13332..13544 -
1683186859.605279-CDS-P-wetherbeei_contig58:13762..138851683186859.605279-CDS-P-wetherbeei_contig58:13762..13885Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig58 13763..13885 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig58.5.1prot_P-wetherbeei_contig58.5.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig58 13332..13885 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig58.5.1

>prot_P-wetherbeei_contig58.5.1 ID=prot_P-wetherbeei_contig58.5.1|Name=mRNA_P-wetherbeei_contig58.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=112bp
RGFKRDIARNSENSRTGKPIPWRIVSAIEAAEAKKEADVEKVRLKNINLR
LTLRKLEGQLSAKEQLAEGLHLIDFEQLKIENQTLNDKIEERAEELDKLR
KKNTTTVQVRS*
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mRNA from alignment at P-wetherbeei_contig58:13332..13885-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig58.5.1 ID=mRNA_P-wetherbeei_contig58.5.1|Name=mRNA_P-wetherbeei_contig58.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=554bp|location=Sequence derived from alignment at P-wetherbeei_contig58:13332..13885- (Phaeothamnion wetherbeei SAG_119_79)
CGCGGCTTCAAGCGGGACATTGCGCGCAACTCAGAGAACAGCCGCACGGG
CAAGCCGATCCCGTGGCGGATCGTGTCAGCCATCGAGGCCGCCGAGGCCA
AAAAGGAGGCCGACGTCGAAAAGGTCAGTGCCGATTTCTACTAGATGATG
CCAGGATAAGCAATAGTCAATCTTGACAATGCGTAAAGGATTTCCAAATA
GTGCCAACAGCCGTTGCCGGCGTTGTGCTGCGCCGCTTGCGGTGGTGGTG
CAACAGCATCACCTCCTTCCGTACAGCACACTCACCTCCCTGTCTTTCCG
AATGCTGCGCCTTCTCGTCGTCCTCCTCCGTCTTACTTCAGGTGCGGCTG
AAGAACATCAACCTGCGGCTGACGCTGCGCAAGCTGGAGGGGCAGCTGTC
GGCCAAAGAGCAACTGGCCGAGGGGCTGCACCTCATCGACTTCGAGCAGC
TCAAGATCGAGAACCAGACCCTCAACGACAAAATCGAGGAGCGCGCAGAG
GAGCTCGACAAGCTCCGCAAGAAGAACACCACCACCGTCCAAGTCCGGTC
ATAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig58:13332..13885-

>mRNA_P-wetherbeei_contig58.5.1 ID=mRNA_P-wetherbeei_contig58.5.1|Name=mRNA_P-wetherbeei_contig58.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=336bp|location=Sequence derived from alignment at P-wetherbeei_contig58:13332..13885- (Phaeothamnion wetherbeei SAG_119_79)
CGCGGCTTCAAGCGGGACATTGCGCGCAACTCAGAGAACAGCCGCACGGG
CAAGCCGATCCCGTGGCGGATCGTGTCAGCCATCGAGGCCGCCGAGGCCA
AAAAGGAGGCCGACGTCGAAAAGGTGCGGCTGAAGAACATCAACCTGCGG
CTGACGCTGCGCAAGCTGGAGGGGCAGCTGTCGGCCAAAGAGCAACTGGC
CGAGGGGCTGCACCTCATCGACTTCGAGCAGCTCAAGATCGAGAACCAGA
CCCTCAACGACAAAATCGAGGAGCGCGCAGAGGAGCTCGACAAGCTCCGC
AAGAAGAACACCACCACCGTCCAAGTCCGGTCATAA
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