mRNA_P-wetherbeei_contig57972.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: A0A4U0PEH3_9NEIS (Methyl-accepting chemotaxis protein n=2 Tax=Chitiniphilus eburneus TaxID=2571148 RepID=A0A4U0PEH3_9NEIS) HSP 1 Score: 190 bits (482), Expect = 4.480e-54 Identity = 90/167 (53.89%), Postives = 122/167 (73.05%), Query Frame = 1
Query: 1 AKTQIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
A ++A VS I +S+ V RM ++ ++SQ+LS+A E ++E+ R+ +G G+ + II R + YRD +L A+AGRG+N+FDQ YR IPGT PQKY T YD E E+ELQPLYDRLV+E+ GG F+LA+D++ Y THNS YSKPPTG+ A DL+ SRDKR+F DP
Sbjct: 419 ANHMVNANVSEIHQLSLAVNERMTRSAQSSQDLSRAAERVQEMMGRYIVGQGELDAIIQRTSRYRDDIQLKLEAMAGRGVNIFDQQYRPIPGTKPQKYKTSYDAEFERELQPLYDRLVKESTGGKFSLAVDSKGYGATHNSWYSKPPTGDPAVDLVNSRDKRLFNDP 585
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: UPI00036391FD (methyl-accepting chemotaxis protein n=1 Tax=Chitiniphilus shinanonensis TaxID=553088 RepID=UPI00036391FD) HSP 1 Score: 189 bits (479), Expect = 6.640e-54 Identity = 88/163 (53.99%), Postives = 120/163 (73.62%), Query Frame = 1
Query: 13 IHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
++A VS I +S+ V RM ++ ++SQ+LS+A E ++E+ R+ +G G+ + II R + YRD +L A+ R +N+FDQ+YR IPGTDPQK+ T YD E E+ELQPLYDRLV+ET GG F+LA+DT+ Y THNS YSKPPTG+ A DL+ SRDKR+F DP
Sbjct: 382 VNANVSEIHQLSLAVNERMTRSAQSSQDLSRAAERVQEMMGRYIVGQGELDTIIQRTSRYRDEIQLKLEAMLARNVNIFDQSYRPIPGTDPQKFKTSYDAEFERELQPLYDRLVKETTGGKFSLAVDTKGYGATHNSWYSKPPTGDRAVDLVNSRDKRLFNDP 544
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: A0A1U9JMX6_9NEIS (Methyl-accepting chemotaxis protein n=2 Tax=Neisseriales TaxID=206351 RepID=A0A1U9JMX6_9NEIS) HSP 1 Score: 178 bits (451), Expect = 7.750e-50 Identity = 86/164 (52.44%), Postives = 115/164 (70.12%), Query Frame = 1
Query: 10 QIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
Q++ VS I +S V +++ +++ S+ELS A+E ++EL +RF +G G F+ I+R YR+ +RL +A RGIN+FD+NYR IPG+ PQKYHT YD E+ +QP YDRLV+ET GG FAL +D YAPTHNS YSK PTG+ DLL SRDKR+F DP
Sbjct: 381 QVNRHVSDIDELSQQVTEKLQLSHQVSKELSHASEQVQELVSRFSVGEGDFDHAINRARSYREMLEKRLQEMAERGINLFDRNYRPIPGSHPQKYHTSYDESFEQLMQPDYDRLVDETPGGRFALLVDEGGYAPTHNSFYSKKPTGDARVDLLHSRDKRIFNDP 544
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: C1D7Z8_LARHH (Probable methyl-accepting chemotaxis protein IV n=17 Tax=Laribacter hongkongensis TaxID=168471 RepID=C1D7Z8_LARHH) HSP 1 Score: 178 bits (451), Expect = 8.420e-50 Identity = 83/164 (50.61%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 10 QIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
Q++A V IR +S +V R+ Q+ S+ L++ E ++ L +RF +G G+F++II R YRD+C RL L G+ +FDQ Y+ +P T PQKY TGYD + + LQPLYD+LV+ET GG FAL +DT YAP+HNS YS+P TGN TDL SRDKR+F DP
Sbjct: 380 QVNANVGEIRTLSTEVQDRLAQSADVSRSLAETAEQVQGLVSRFTLGEGEFDQIIARARHYRDQCQSRLVELVEAGVELFDQRYQPVPDTHPQKYRTGYDDKIPERLQPLYDKLVQETSGGRFALLVDTNGYAPSHNSYYSRPLTGNPKTDLQQSRDKRIFNDP 543
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: A0A1W1XW71_9NEIS (Methyl-accepting chemotaxis protein n=1 Tax=Andreprevotia lacus DSM 23236 TaxID=1121001 RepID=A0A1W1XW71_9NEIS) HSP 1 Score: 177 bits (448), Expect = 2.040e-49 Identity = 84/167 (50.30%), Postives = 116/167 (69.46%), Query Frame = 1
Query: 1 AKTQIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
A ++A VS I +S+ V RM ++ ++SQ+L+ A E ++E+ RF +G G+ + I R +RD+ R+ RG+NVFDQNY+AI G++P KY T YD+ EKE+QPLYD+LV+ET GG F+LA+D Y PTHNS YSKP TG+ ATDL+ SRDKR+F DP
Sbjct: 378 ANNLVNANVSEIHQLSLAVNERMTRSAQSSQDLASAAERVQEMIGRFVVGQGELDAAIQRCGRFRDQVAARIEEFRRRGVNVFDQNYQAIAGSNPAKYRTSYDQLFEKEIQPLYDQLVKETNGGKFSLAVDANGYGPTHNSWYSKPQTGDKATDLVNSRDKRIFNDP 544
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: UPI0013591BFA (methyl-accepting chemotaxis protein n=1 Tax=Andreprevotia sp. IGB-42 TaxID=2497473 RepID=UPI0013591BFA) HSP 1 Score: 171 bits (434), Expect = 2.200e-47 Identity = 84/167 (50.30%), Postives = 113/167 (67.66%), Query Frame = 1
Query: 1 AKTQIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
A ++A VS I +S+ V RM ++ ++SQ+LS+A E ++EL RF +G G+ + I R RD ++ RG+NVFDQNY+AI G++P K+ T YD+ EKE+QPLYDRL +ET GG F+LAID Y PTHNS YSKP TG+ A DL+ SRDKR+F DP
Sbjct: 378 ANNLVNANVSEIHQLSLAVNERMTRSAQSSQDLSRAAEKVQELIGRFVVGKGELDAAIQRCGRVRDEVAAKIEDFRKRGVNVFDQNYQAIAGSNPPKFKTSYDQLFEKEIQPLYDRLAKETPGGKFSLAIDVNGYGPTHNSWYSKPQTGDKAVDLVNSRDKRIFNDP 544
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: A0A0K6GTU4_9NEIS (Methyl-accepting chemotaxis protein n=2 Tax=Gulbenkiania TaxID=397456 RepID=A0A0K6GTU4_9NEIS) HSP 1 Score: 171 bits (432), Expect = 4.100e-47 Identity = 82/164 (50.00%), Postives = 112/164 (68.29%), Query Frame = 1
Query: 10 QIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
+++ VS I +S +V +R+ + + LS+A E ++EL +RF IG G F+ ++ + RD +RL LA G+N+FDQNY+AIPGT P KYHT YD + EK LQP+YD+ V +GG F LA+DT+ YAPTHNS YS+ PTGN TDL+ SRDKR+F DP
Sbjct: 381 EVNVHVSEIHQLSQEVTSRLNHTEQVAGALSRAAEQVQELVSRFVIGEGDFDRTVNMARQARDEVQQRLNRLAEDGLNLFDQNYQAIPGTHPAKYHTLYDSQVEKLLQPVYDQAVSSAKGGRFCLAVDTQGYAPTHNSVYSQAPTGNPQTDLVNSRDKRIFNDP 544
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: A0A5A8F5T0_9BACT (Methyl-accepting chemotaxis protein n=2 Tax=Deferribacter autotrophicus TaxID=500465 RepID=A0A5A8F5T0_9BACT) HSP 1 Score: 170 bits (430), Expect = 7.550e-47 Identity = 86/166 (51.81%), Postives = 113/166 (68.07%), Query Frame = 1
Query: 10 QIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHG--KFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
+IH V I +S DV +M +A A+ EL++ T++++ L ++F+ G G KFE I++ +YRD C ER+ +L RGINVFD NY IP T+PQKY T YD EKELQP+YD+ VEE GG F L +D YAPTHNSKYSK TGN+ DL+ SRDKR++ DP
Sbjct: 374 EIHKNVEEIHSLSKDVLDKMNEANIATDELNKETQLMQVLVSKFKTGAGECKFESILNIGMKYRDLCYERIKSLKDRGINVFDINYIPIPDTNPQKYKTSYDSYFEKELQPIYDKGVEEVPGGIFMLCVDKNGYAPTHNSKYSKQLTGNYEADLINSRDKRIYNDP 539
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: UPI0005551474 (methyl-accepting chemotaxis protein n=1 Tax=Andreprevotia chitinilytica TaxID=396808 RepID=UPI0005551474) HSP 1 Score: 170 bits (430), Expect = 8.060e-47 Identity = 78/167 (46.71%), Postives = 118/167 (70.66%), Query Frame = 1
Query: 1 AKTQIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
A +++ VS I +S+ V RM ++ ++SQ+LS+A E ++E+ RF +G G+ + I R +RD+ ++ + RG+N+FDQ+Y+A+ G++P K+ T YD+ EKE+QPLYD+LV+ET GG F+LA+D+ Y PTHNS YSKP TG+ A DL+ SRDKR+F DP
Sbjct: 378 ANNLVNSNVSEIHQLSLAVNERMTRSAQSSQDLSRAAEKVQEMIGRFVVGQGELDAAIQRSGRFRDQVVAKIESFRQRGVNIFDQSYQAVAGSNPPKFKTSYDQLFEKEIQPLYDQLVKETPGGKFSLAVDSNGYGPTHNSWYSKPQTGDKAVDLVNSRDKRIFNDP 544
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Match: A0A1D9BI53_9NEIS (Uncharacterized protein n=4 Tax=Jeongeupia TaxID=885864 RepID=A0A1D9BI53_9NEIS) HSP 1 Score: 169 bits (427), Expect = 2.120e-46 Identity = 83/167 (49.70%), Postives = 110/167 (65.87%), Query Frame = 1
Query: 1 AKTQIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGHGKFEEIIDRVAEYRDRCTERLAALAGRGINVFDQNYRAIPGTDPQKYHTGYDRECEKELQPLYDRLVEETEGGTFALAIDTRAYAPTHNSKYSKPPTGNHATDLLASRDKRMFTDP 501
A ++A VS I +S+ V RM ++ ++SQ+LS ATE ++E+ RF +G G+ + I R YRD+ +L RG++VFDQ Y+ + GT+P K+ T YD EKE+QPLYD LV ET GG F+LA DT Y THNS YSKP TG+ A DLL SRDKR+F DP
Sbjct: 378 ANNTVNANVSEIHQLSLAVNERMTRSAQSSQDLSTATEKVQEMIGRFIVGQGELDAAIQRAGHYRDQVAAKLEGFIQRGVDVFDQRYQPVAGTNPPKFRTSYDGLFEKEIQPLYDALVRETSGGKFSLATDTNGYGATHNSWYSKPATGDLAVDLLNSRDKRIFNDP 544 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57972.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57972.1.1 >prot_P-wetherbeei_contig57972.1.1 ID=prot_P-wetherbeei_contig57972.1.1|Name=mRNA_P-wetherbeei_contig57972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp AKTQIHAPVSAIRGMSVDVGTRMEQAYKASQELSQATEMIEELAARFRIGback to top mRNA from alignment at P-wetherbeei_contig57972:6..506+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57972.1.1 ID=mRNA_P-wetherbeei_contig57972.1.1|Name=mRNA_P-wetherbeei_contig57972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig57972:6..506+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57972:6..506+ >mRNA_P-wetherbeei_contig57972.1.1 ID=mRNA_P-wetherbeei_contig57972.1.1|Name=mRNA_P-wetherbeei_contig57972.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig57972:6..506+ (Phaeothamnion wetherbeei SAG_119_79)back to top |