mRNA_P-wetherbeei_contig57969.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57969.1.1
Unique NamemRNA_P-wetherbeei_contig57969.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A7W0PRL4_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PRL4_9CHLR)

HSP 1 Score: 170 bits (431), Expect = 5.470e-49
Identity = 92/139 (66.19%), Postives = 110/139 (79.14%), Query Frame = 1
Query:    1 YARGIVAALQARGIALRGA-DLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            Y  G++A+L  R   +RGA  L+IAG+VP+GFGMSSSA LCV LVLALA  + + RDTV +AREAEHR G+PVGAMDQSASVAGG+ILFDG   ++  L+PDLGD  FAVADSG+ H+ ATSSYPTRV ESQEAL  +R
Sbjct:  102 YTMGVMASLLGRDQEIRGALQLSIAGNVPVGFGMSSSAGLCVALVLALASIEPTGRDTVAIAREAEHRCGSPVGAMDQSASVAGGVILFDGRDASYSSLEPDLGDYVFAVADSGITHALATSSYPTRVTESQEALGFIR 240          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A6J4UUF6_9CHLR (Galactokinase n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UUF6_9CHLR)

HSP 1 Score: 169 bits (428), Expect = 1.710e-48
Identity = 90/139 (64.75%), Postives = 113/139 (81.29%), Query Frame = 1
Query:    1 YARGIVAALQARGI-ALRGADLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            YA GI+AAL  R + ++    L+IAG+VPLGFGMSSSAALCV L L LA++DLS  D V +A++AEHRAG+PVGAMDQSASVAGG+ILFDG+ T+F +L P+LGD AFAVADSG+ H+  TS+YP RV+ESQ AL +L+
Sbjct:  109 YALGILAALDQRSVPSITSGQLSIAGNVPLGFGMSSSAALCVALTLTLAESDLSEADIVAIAQDAEHRAGSPVGAMDQSASVAGGVILFDGSDTSFRRLDPELGDYAFAVADSGIHHAIRTSAYPVRVKESQRALKLLQ 247          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A838GDD1_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838GDD1_9CHLR)

HSP 1 Score: 163 bits (412), Expect = 2.160e-46
Identity = 87/139 (62.59%), Postives = 106/139 (76.26%), Query Frame = 1
Query:    1 YARGIVAALQARGIALRGA-DLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            YARG++A+L +R + + G   L+IAG+VP+GFGMSSSA LCV LVL LA  +   RD V +ARE EHR G+PVGAMDQSASVAGG+ILFDG   ++  L PDLGD  FAVADSG+ H+  TSSYP RV ESQEAL I++
Sbjct:   78 YARGLIASLLSRDLEVHGGLQLSIAGNVPIGFGMSSSAGLCVALVLTLACTEPEARDIVAIARETEHRCGSPVGAMDQSASVAGGVILFDGRDASYTALDPDLGDFVFAVADSGITHALGTSSYPARVAESQEALGIIK 216          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A7W0KCP0_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0KCP0_9CHLR)

HSP 1 Score: 160 bits (405), Expect = 4.170e-45
Identity = 86/139 (61.87%), Postives = 105/139 (75.54%), Query Frame = 1
Query:    1 YARGIVAALQARGIALRGA-DLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            YARG++A+L  R + +RG   L+IAG+VP+GFGMSSSA LCV LVL LA  +   RD V +ARE EHR G+PVGAMDQSASVAGG+ILFDG   ++  L P LG+  FAVADSG+ H+  TSSYP RV ESQEAL I++
Sbjct:  104 YARGVIASLLCRDLEVRGGLQLSIAGNVPIGFGMSSSAGLCVALVLTLACTEPEERDIVAIARETEHRCGSPVGAMDQSASVAGGVILFDGRDASYTPLDPHLGEYVFAVADSGITHALGTSSYPARVAESQEALGIIK 242          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A7V9VWX2_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VWX2_9CHLR)

HSP 1 Score: 153 bits (386), Expect = 2.770e-42
Identity = 84/139 (60.43%), Postives = 102/139 (73.38%), Query Frame = 1
Query:    1 YARGIVAALQARGIALR-GADLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            Y RG++A+L AR   +  G  L++AGDVPLGFGMSSSAALCV L + L+  +L P   V VAR+AEHR G+PVGAMDQS +VAGG+ILFDG   +F  + PDLG+  FAVADSGV H+   SSY TRV ESQEAL  +R
Sbjct:  104 YVRGVLASLLAREHPVNSGLQLSVAGDVPLGFGMSSSAALCVALAMTLSTTELEPPALVAVARDAEHRCGSPVGAMDQSVAVAGGVILFDGRDASFSSIAPDLGNFVFAVADSGVTHALGQSSYSTRVAESQEALNTIR 242          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A6J4U4W0_9CHLR (Galactokinase n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4U4W0_9CHLR)

HSP 1 Score: 151 bits (381), Expect = 1.810e-41
Identity = 84/139 (60.43%), Postives = 104/139 (74.82%), Query Frame = 1
Query:    1 YARGIVAALQARGIALRG-ADLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            Y RG++A   ARG ALR  A LA+AGDVPLGFG+SSSAA+CV +VLA  +      D V +A+ AEHRAGAPVG MDQSASVAGG++LFDG T   E+L+PDLG   FAV DSGV+ S   S+YPTRV+E+++AL + R
Sbjct:  111 YLRGVIAEAGARGNALRSPARLALAGDVPLGFGLSSSAAVCVAMVLAAVERPPGGADLVRIAQGAEHRAGAPVGGMDQSASVAGGVVLFDGETLGVERLEPDLGQYVFAVVDSGVKRSVGASAYPTRVREARQALDLAR 249          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A6J4TZR8_9CHLR (Galactokinase n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4TZR8_9CHLR)

HSP 1 Score: 150 bits (380), Expect = 2.540e-41
Identity = 87/136 (63.97%), Postives = 103/136 (75.74%), Query Frame = 1
Query:    1 YARGIVA-ALQARGIALRG-ADLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEAL 402
            Y RG+VA AL    ++LR   +LAIAGDVPLGFG+SSSAALCV L LA+ +   S  D V++A+EAEHRAG P G MDQSASVAGG+I FDGAT T E+L PDLG+L FAV DSGV+ S   SSYP RV+ES+ AL
Sbjct:  113 YVRGLVAGALDRPNLSLRRPTELAIAGDVPLGFGLSSSAALCVSLGLAMVEPRPSDHDLVLLAQEAEHRAGTPCGTMDQSASVAGGVIRFDGATLTIERLSPDLGELVFAVVDSGVERSLGVSSYPLRVEESRAAL 248          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A7W0V7A8_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0V7A8_9CHLR)

HSP 1 Score: 150 bits (379), Expect = 3.850e-41
Identity = 87/140 (62.14%), Postives = 104/140 (74.29%), Query Frame = 1
Query:    1 YARGIVAALQAR-GIALR-GADLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            YARG++A LQ R  +  R  A +AIAGDVP+GFG+SSSAALCV L LALAD   S ++ V++A+EAEHRAG P G MDQSASVAGG+I FDGAT   E+L P LGD  F VADSGV+ S   SSYP RV ES++AL + R
Sbjct:  112 YARGLLAGLQDRPSLTPRLSASVAIAGDVPIGFGVSSSAALCVSLALALADCYESSQEVVLLAQEAEHRAGTPCGTMDQSASVAGGVIAFDGATLGVERLSPSLGDRVFVVADSGVKRSLGASSYPQRVAESRQALELAR 251          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A7V9N7L4_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9N7L4_9CHLR)

HSP 1 Score: 148 bits (373), Expect = 2.940e-40
Identity = 87/141 (61.70%), Postives = 104/141 (73.76%), Query Frame = 1
Query:    1 YARGIVAALQARGIALR---GADLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            YARG+VAAL  R  +LR    A +AIAGDVP+GFG+SSSAALCV L LALAD   S ++ +++A+ AEHRAG P GAMDQSASV GG+I FD AT   E+L P LGDL F VADSGV    + SSYP R++ES+EALA  R
Sbjct:  112 YARGLVAALLERP-SLRLNLPASIAIAGDVPIGFGVSSSAALCVSLALALADGFASSQEVILLAQGAEHRAGTPCGAMDQSASVTGGVIAFDSATLGVERLSPPLGDLVFVVADSGVDRLVSASSYPRRIEESREALARAR 251          
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Match: A0A7W0A503_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0A503_9CHLR)

HSP 1 Score: 142 bits (358), Expect = 3.340e-38
Identity = 81/139 (58.27%), Postives = 98/139 (70.50%), Query Frame = 1
Query:    1 YARGIVAALQARGIALR-GADLAIAGDVPLGFGMSSSAALCVGLVLALADADLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQPDLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR 414
            Y  GI+ AL    +  R G ++ + GDVPLGFGMSSSAALCV L   LAD +LS    + +AR AEH  GAPVGAMDQS SVAGG+ILFDGAT     + P+LG+  FAVA+SGV H+   S+YPTRV+ESQ+AL  LR
Sbjct:  100 YLGGILQALHESELPARDGQEIVVTGDVPLGFGMSSSAALCVALTNLLADTELSSSQIIDIARRAEHLTGAPVGAMDQSISVAGGVILFDGATGEVTPINPELGNRVFAVANSGVYHALNQSAYPTRVRESQQALDALR 238          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57969.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W0PRL4_9CHLR5.470e-4966.19Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A6J4UUF6_9CHLR1.710e-4864.75Galactokinase n=1 Tax=uncultured Thermomicrobiales... [more]
A0A838GDD1_9CHLR2.160e-4662.59Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7W0KCP0_9CHLR4.170e-4561.87Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7V9VWX2_9CHLR2.770e-4260.43Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A6J4U4W0_9CHLR1.810e-4160.43Galactokinase n=1 Tax=uncultured Thermomicrobiales... [more]
A0A6J4TZR8_9CHLR2.540e-4163.97Galactokinase n=1 Tax=uncultured Thermomicrobiales... [more]
A0A7W0V7A8_9CHLR3.850e-4162.14Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7V9N7L4_9CHLR2.940e-4061.70Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]
A0A7W0A503_9CHLR3.340e-3858.27Uncharacterized protein n=1 Tax=Chloroflexia bacte... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57969contigP-wetherbeei_contig57969:32..445 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1229487.AMYW01000015_gene2396
Preferred namegalK
PFAMsGHMP_kinases_C,GHMP_kinases_N,GalKase_gal_bdg
Model size414
Max annot lvl976|Bacteroidetes
KEGG rclassRC00002,RC00078
KEGG koko:K00849
KEGG ReactionR01092
KEGG Pathwayko00052,ko00520,ko01100,map00052,map00520,map01100
KEGG ModuleM00554,M00632
Hectar predicted targeting categorysignal peptide
Exons1
Evalue5.2e-17
EggNOG OGsCOG0153@1|root,COG0153@2|Bacteria,4NE0C@976|Bacteroidetes,1HWZC@117743|Flavobacteriia,2NSWD@237|Flavobacterium
EC2.7.1.6
DescriptionBelongs to the GHMP kinase family. GalK subfamily
Cds size414
COG categoryG
BRITEko00000,ko00001,ko00002,ko01000,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186859.0929792-CDS-P-wetherbeei_contig57969:31..4451683186859.0929792-CDS-P-wetherbeei_contig57969:31..445Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57969 32..445 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57969.1.1prot_P-wetherbeei_contig57969.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57969 32..445 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57969.1.1

>prot_P-wetherbeei_contig57969.1.1 ID=prot_P-wetherbeei_contig57969.1.1|Name=mRNA_P-wetherbeei_contig57969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=138bp
YARGIVAALQARGIALRGADLAIAGDVPLGFGMSSSAALCVGLVLALADA
DLSPRDTVIVAREAEHRAGAPVGAMDQSASVAGGIILFDGATTTFEQLQP
DLGDLAFAVADSGVQHSNATSSYPTRVQESQEALAILR
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mRNA from alignment at P-wetherbeei_contig57969:32..445+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57969.1.1 ID=mRNA_P-wetherbeei_contig57969.1.1|Name=mRNA_P-wetherbeei_contig57969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig57969:32..445+ (Phaeothamnion wetherbeei SAG_119_79)
TACGCGCGCGGCATCGTCGCCGCGCTCCAGGCCCGTGGGATCGCCCTGCG CGGCGCGGACCTCGCCATCGCGGGCGATGTGCCGCTCGGGTTCGGCATGA GCTCGTCCGCCGCCCTCTGCGTCGGCCTGGTGCTCGCCCTCGCGGACGCC GATCTCTCGCCGCGCGACACCGTGATCGTGGCGCGGGAGGCGGAGCACCG GGCCGGGGCGCCGGTCGGCGCGATGGACCAGTCCGCGTCGGTGGCGGGCG GCATCATCCTCTTCGACGGCGCGACAACGACCTTCGAGCAGCTGCAACCG GACCTCGGCGACCTCGCCTTCGCCGTCGCGGACTCTGGCGTCCAGCATTC GAACGCAACCTCGTCCTACCCGACGCGCGTGCAGGAATCGCAGGAGGCGC TGGCGATCCTGCGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57969:32..445+

>mRNA_P-wetherbeei_contig57969.1.1 ID=mRNA_P-wetherbeei_contig57969.1.1|Name=mRNA_P-wetherbeei_contig57969.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=414bp|location=Sequence derived from alignment at P-wetherbeei_contig57969:32..445+ (Phaeothamnion wetherbeei SAG_119_79)
TACGCGCGCGGCATCGTCGCCGCGCTCCAGGCCCGTGGGATCGCCCTGCG
CGGCGCGGACCTCGCCATCGCGGGCGATGTGCCGCTCGGGTTCGGCATGA
GCTCGTCCGCCGCCCTCTGCGTCGGCCTGGTGCTCGCCCTCGCGGACGCC
GATCTCTCGCCGCGCGACACCGTGATCGTGGCGCGGGAGGCGGAGCACCG
GGCCGGGGCGCCGGTCGGCGCGATGGACCAGTCCGCGTCGGTGGCGGGCG
GCATCATCCTCTTCGACGGCGCGACAACGACCTTCGAGCAGCTGCAACCG
GACCTCGGCGACCTCGCCTTCGCCGTCGCGGACTCTGGCGTCCAGCATTC
GAACGCAACCTCGTCCTACCCGACGCGCGTGCAGGAATCGCAGGAGGCGC
TGGCGATCCTGCGA
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