mRNA_P-wetherbeei_contig57940.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A836TNU5_9PROT (Porin n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836TNU5_9PROT) HSP 1 Score: 227 bits (578), Expect = 4.230e-70 Identity = 111/170 (65.29%), Postives = 134/170 (78.82%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPA---TFTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQSVQPTGATLVE 501
DRIRL++E+ELEHSIAGEGK GE+ELEQA++EFD+ D+ + GLFL+P+GI+NETHEP TF+GVERN VE N+IPTTWWEGGV+ + FG GFS DLAAHSGL V + IRSGR+KV A AKD AYTGRVKW+GMPGVE+A++ QYQ DITQ T A +E
Sbjct: 146 DRIRLKSEIELEHSIAGEGKNGEVELEQAFVEFDINDQNTTRAGLFLIPVGIMNETHEPPTFYGVERNPVEKNIIPTTWWEGGVSWATRFGSGFSVDLAAHSGLDVPDTGGNAYKIRSGRKKVSKAPAKDLAYTGRVKWSGMPGVEVAVTGQYQGDITQGNTDTEAFFIE 315
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A2E6QEB7_9PROT (Porin n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6QEB7_9PROT) HSP 1 Score: 220 bits (560), Expect = 1.680e-67 Identity = 112/171 (65.50%), Postives = 128/171 (74.85%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPAT----FTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQSVQPTGATLVE 501
DR+RL TE ELEH++AGEG+PGE+ELEQA++EFDVTD + GLFLLP+GI+NETHEP TFFGVERN VE+ +IPTTWWE GV S GGGFS D A HSGL V P T F IRSGRQKV A A+D A TGR++WTGMPGVELA S QYQ D+TQ TL E
Sbjct: 129 DRLRLFTEFELEHALAGEGQPGEVELEQAWIEFDVTDTQHARAGLFLLPVGIMNETHEPPTFFGVERNQVESAIIPTTWWEAGVGMSGQIGGGFSYDAAFHSGLSV-PITGGNAFVIRSGRQKVAEAPAEDFAATGRLRWTGMPGVELATSLQYQQDVTQDALDVSGTLFE 298
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A1Z7WU75_9GAMM (Porin n=2 Tax=unclassified Methylophaga TaxID=2629249 RepID=A0A1Z7WU75_9GAMM) HSP 1 Score: 214 bits (544), Expect = 3.610e-65 Identity = 107/171 (62.57%), Postives = 130/171 (76.02%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPA-TFTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQSVQPT--GATLVET 504
D +R +ELELEHS+AG+GK GE+ELEQAY+E+D+ D+ +V GLFL P+GI+NETHEPNTF+G ERN VE N+IP+TWWE GV S + GFS D+AA SGL ++ +RSGRQKV A A+D AYTGR+KWTG+PGVELA S QYQ DITQS T GATL ET
Sbjct: 135 DNLRFFSELELEHSLAGDGKEGEVELEQAYIEYDINDQHQVTGGLFLTPVGIINETHEPNTFYGTERNSVEKNIIPSTWWEAGVMFSGEIAEGFSYDVAATSGLNTSSGDSYKVRSGRQKVSKAEAEDYAYTGRIKWTGLPGVELAASLQYQEDITQSNDKTAGGATLFET 305
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A661DTS9_9GAMM (Porin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661DTS9_9GAMM) HSP 1 Score: 211 bits (538), Expect = 1.240e-64 Identity = 104/171 (60.82%), Postives = 131/171 (76.61%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPAT-FTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQSVQPTG--ATLVET 504
D +R +ELELEHS++G+GK GEIELEQAY+E+D+ D+ +VK GLFL+P+GI+NETHEP TF+G ERN VE N++P TWWEGG S D GFS D+AA SGL + + +R+GRQKV A A+D AYTGR+KWTG+PG+EL+ +AQYQ DITQS PT ATL ET
Sbjct: 102 DDLRFFSELELEHSLSGDGKEGEIELEQAYIEYDINDQHRVKGGLFLMPVGIINETHEPTTFYGTERNPVEKNIVPATWWEGGAMFSGDIAEGFSYDVAATSGLNTTVSKDYKVRNGRQKVSKAEAEDFAYTGRLKWTGIPGIELSATAQYQEDITQSNDPTAGSATLYET 272
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A3C0TY12_9PROT (Porin n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TY12_9PROT) HSP 1 Score: 211 bits (536), Expect = 3.990e-64 Identity = 109/172 (63.37%), Postives = 128/172 (74.42%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPAT----FTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQSVQPTGATLVET 504
D IR +E+ELEHS+AGEGK GE+ELEQA++EFD+T K + GLFLLPIGILNETHEP TF+GVERN VETN+IPTTWWEGGV + G GFS +LA HSGL V P T F R+GR KV A A D A T R++W G+PGVEL LS QYQNDITQ+ + A L+ET
Sbjct: 117 DSIRFFSEVELEHSLAGEGKKGEVELEQAFVEFDLTGTQKAQAGLFLLPIGILNETHEPPTFYGVERNGVETNIIPTTWWEGGVQARGELGRGFSYNLAMHSGLDV-PTTGANAFRPRNGRAKVSEAPANDPAITARLRWNGLPGVELGLSGQYQNDITQNADDSEAFLIET 287
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A2H0QID6_9PROT (Porin n=1 Tax=Alphaproteobacteria bacterium CG11_big_fil_rev_8_21_14_0_20_44_7 TaxID=1973901 RepID=A0A2H0QID6_9PROT) HSP 1 Score: 211 bits (536), Expect = 6.320e-64 Identity = 103/162 (63.58%), Postives = 129/162 (79.63%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPAT----FTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQSV 474
D +RL +E+ELEHSIAGEG+ GE ELEQA+LE+D+ D + + G+FLLP+GILNETHEP TFFGVERN VE+N+IP+TWWEGGV S + G GFS D+A HSGL V P T + +R+GR KVG A A+D A TGR+KWTG PGVE+A +AQYQ+D+TQS+
Sbjct: 132 DDLRLYSEVELEHSIAGEGQVGEFELEQAFLEYDINDYNRARAGVFLLPVGILNETHEPPTFFGVERNPVESNIIPSTWWEGGVGFSGELGEGFSYDVALHSGLNV-PMTGGSAYKVRNGRSKVGKAQAEDGAVTGRLKWTGYPGVEIAATAQYQSDVTQSM 292
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A2G2JUA1_9GAMM (Porin n=1 Tax=Oceanobacter sp. TaxID=2030817 RepID=A0A2G2JUA1_9GAMM) HSP 1 Score: 208 bits (529), Expect = 8.210e-64 Identity = 109/168 (64.88%), Postives = 127/168 (75.60%), Query Frame = 1
Query: 4 RIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPATFTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQSV--QPTGATLVE 501
R R +ELELEHS+AGEGKPGE+ELEQAY+E+DV D K + GLFLLPIGILNETHEP+TF+GVERN VE +IPTTWWEGGV+ S G S D+A HSGL + AT IRSGRQKV ATA AAYT RVK+T +PG+ELA+S QYQ+DI Q GA L+E
Sbjct: 58 RTRFFSELELEHSLAGEGKPGEVELEQAYVEYDVNDSTKARAGLFLLPIGILNETHEPDTFYGVERNNVEKRIIPTTWWEGGVSLSGSIVYGVSYDVAIHSGLNNEEAT--IRSGRQKVAEATANKAAYTARVKYTAIPGLELAVSGQYQDDILQGAGDDEIGAGLIE 223
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: W8G3A1_9GAMM (Porin n=6 Tax=root TaxID=1 RepID=W8G3A1_9GAMM) HSP 1 Score: 209 bits (531), Expect = 9.380e-64 Identity = 110/170 (64.71%), Postives = 129/170 (75.88%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPATFTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQS--VQPTGATLVET 504
+R R +E ELEHSIAGEGK GEIELEQA++E+DV D KVK GLFLLP+GILNETHEP TF+GVERN VE N+IPTTWWEGGVA S D G S D+A HSGL + AT ++RSGRQKV A A AAYT R+K+T +PG+ELA S QYQ+DI Q + GA L+ET
Sbjct: 91 ERTRFFSEFELEHSIAGEGKNGEIELEQAFIEYDVADTTKVKGGLFLLPVGILNETHEPETFYGVERNNVEKNIIPTTWWEGGVAVSGDVADGVSYDVAVHSGL--NSATGSLRSGRQKVSEAPANKAAYTARLKYTAIPGLELAASVQYQDDILQGDGEREIGARLLET 258
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A426QL66_9GAMM (Porin n=1 Tax=Thiohalobacter thiocyanaticus TaxID=585455 RepID=A0A426QL66_9GAMM) HSP 1 Score: 209 bits (531), Expect = 2.130e-63 Identity = 99/157 (63.06%), Postives = 121/157 (77.07%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDPAT-FTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQ 468
D IRL TELE+EH++AGEG+PGE+ELEQAY+E D+ D + K G+FLLP+GILNETHEPNTF+GVERN +E N+IPTTWW G S + G GFS DL H GL++ AT F +R GRQK A A D AYTGR+K+TGMPG+ELA + Q+Q DITQ
Sbjct: 119 DNIRLFTELEIEHALAGEGQPGEVELEQAYVEMDLNDYHRAKAGVFLLPVGILNETHEPNTFYGVERNPIEKNIIPTTWWAAGAGLSGELGQGFSYDLGVHEGLRITDATSFAVRGGRQKSAEADASDLAYTGRLKYTGMPGLELATTLQHQTDITQ 275
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Match: A0A4Y8UI86_9GAMM (Porin n=1 Tax=Gammaproteobacteria bacterium LSUCC0057 TaxID=2559237 RepID=A0A4Y8UI86_9GAMM) HSP 1 Score: 208 bits (529), Expect = 6.890e-63 Identity = 104/176 (59.09%), Postives = 134/176 (76.14%), Query Frame = 1
Query: 1 DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIGILNETHEPNTFFGVERNIVETNVIPTTWWEGGVATSYDFGGGFSADLAAHSGLKVDP---ATFTIRSGRQKVGNATAKDAAYTGRVKWTGMPGVELALSAQYQNDITQSVQPTG------ATLVE 501
D++RL +ELELEHSIAG+G+PGEIELEQAY+E+D R + K GLFL+P+G+LNETHEP TF+GVERN +E +IPTTWWEGG A + +G GFS D A HSGL ++P + IRSGRQKVGNA A D AYTGR++++G+PG+ +++SAQYQ D+ Q Q T ATL+E
Sbjct: 131 DKLRLVSELELEHSIAGDGQPGEIELEQAYVEWDYAARQQAKFGLFLVPVGMLNETHEPETFYGVERNNIEKEIIPTTWWEGGAALTGRWGEGFSYDAAIHSGLFLNPEENGVYKIRSGRQKVGNANATDFAYTGRLRYSGIPGLSVSVSAQYQTDLLQGEQHTSGAQSLSATLIE 306 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57940.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57940.1.1 >prot_P-wetherbeei_contig57940.1.1 ID=prot_P-wetherbeei_contig57940.1.1|Name=mRNA_P-wetherbeei_contig57940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp DRIRLQTELELEHSIAGEGKPGEIELEQAYLEFDVTDRAKVKTGLFLLPIback to top mRNA from alignment at P-wetherbeei_contig57940:3..506+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57940.1.1 ID=mRNA_P-wetherbeei_contig57940.1.1|Name=mRNA_P-wetherbeei_contig57940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57940:3..506+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57940:3..506+ >mRNA_P-wetherbeei_contig57940.1.1 ID=mRNA_P-wetherbeei_contig57940.1.1|Name=mRNA_P-wetherbeei_contig57940.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57940:3..506+ (Phaeothamnion wetherbeei SAG_119_79)back to top |