mRNA_P-wetherbeei_contig57904.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57904.1.1
Unique NamemRNA_P-wetherbeei_contig57904.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: UPI0019E9EE20 (Uncharacterized protein n=1 Tax=Cytophagales bacterium WSM2-2 TaxID=2774202 RepID=UPI0019E9EE20)

HSP 1 Score: 114 bits (286), Expect = 5.420e-27
Identity = 65/164 (39.63%), Postives = 85/164 (51.83%), Query Frame = 1
Query:   10 KNGEFKNYDREGHLLLEGNFMNGRLHGDNTGYYADGTVKHRFNYEEGNKIGTALTYHTNGKLKLKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAKEEMYKFNLLTGPYKTYYKTGGVEAEGE 501
            K G+F +YD  G+LLLEG+FMNG+LHG N                                   KEQ +L G D  V EY   +  I  K F+   P+G W FY PDGK+  +KENY  G+L+GIR  Y+  G    EE +KF+L+TGP K YY+ G + +E E
Sbjct:  213 KVGDFFSYDPRGNLLLEGHFMNGKLHGKNIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKEQLALNGVDREVTEYDSMEHKIFEKNFRLGKPHGTWYFYAPDGKSLTLKENYLQGQLNGIRTSYYLSGGKKVEETWKFDLITGPVKNYYENGKLLSECE 376          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: A0A7L9BFV5_9BACT (Toxin-antitoxin system YwqK family antitoxin n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7L9BFV5_9BACT)

HSP 1 Score: 107 bits (268), Expect = 1.840e-24
Identity = 47/77 (61.04%), Postives = 62/77 (80.52%), Query Frame = 1
Query:  193 LKLKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAKE 423
            L  KEQ +L G DWV EE+TD+ K IS KR++N+ P+GQW +YYPDGKTE++KE YE GKL+G+R+EYF +GK A+E
Sbjct:  275 LARKEQFALNGIDWVTEEFTDSAKRISEKRYRNQQPHGQWTYYYPDGKTEKLKETYEAGKLNGMRYEYFSNGKPARE 351          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: A0A136LNY9_9BACT (MORN repeat protein n=1 Tax=Bacteroidetes bacterium OLB12 TaxID=1619897 RepID=A0A136LNY9_9BACT)

HSP 1 Score: 106 bits (265), Expect = 5.360e-24
Identity = 57/152 (37.50%), Postives = 75/152 (49.34%), Query Frame = 1
Query:   19 EFKNYDREGHLLLEGNFMNGRLHGDNTGYYADGTVKHRFNYEEGNKIGTALTYHTNGKLKLKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAKEEMYKFNLLTGPYKTYYK 474
            +F +YD++G+ LLEG+FMN RLHG+N GYY DGT++H                                                 K F+   P+G W FY  DGKT ++KENYE G+L G R  Y  +G  A EE +KFNL+TG  K YY+
Sbjct:  228 DFLHYDQQGNKLLEGHFMNARLHGNNIGYYPDGTIRHNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSFREGKPHGTWVFYAADGKTLKLKENYEAGQLHGTRTMYHLNGVKATEETWKFNLITGLVKNYYE 379          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: A0A7D5MIX8_9BACT (Uncharacterized protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7D5MIX8_9BACT)

HSP 1 Score: 100 bits (249), Expect = 1.200e-23
Identity = 52/141 (36.88%), Postives = 70/141 (49.65%), Query Frame = 1
Query:   55 LEGNFMNGRLHGDNTGYYADGTVKHRFNYEEGNKIGTALTYHTNGKLKLKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAKEEMYKFNLLTGPYKTYYKT 477
            +EG+FMN RLHG+N GY+ DGT++H++ ++ GNK                                        K F+   P+G W FY  DGKT ++KENYE G+L G R  Y   G  A EE ++FNL+TG  K   KT
Sbjct:    1 MEGHFMNARLHGNNIGYFPDGTIRHKYQFKSGNKTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKSFREGKPHGTWVFYAADGKTLKLKENYEAGQLHGTRTLYHLHGVKATEETWRFNLITGLVKIIMKT 141          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: A0A5C7Z9J2_9BACT (Toxin-antitoxin system YwqK family antitoxin n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A5C7Z9J2_9BACT)

HSP 1 Score: 99.4 bits (246), Expect = 2.280e-21
Identity = 56/150 (37.33%), Postives = 74/150 (49.33%), Query Frame = 1
Query:    1 EGSKNGEFKNYDREGHLLLEGNFMNGRLHGDNTGYYADGTVKHRFNYEEGNKIGTALTYHTNGKLKLKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAKEEMYKFNLLT 450
            EG K G+F +YD++G  LLEG+FMN RLHG+N G                                     +  G D  + EYT     I  K F+   P+G W FY  DGK  ++KENYE G+L G+R  Y+  G+ + EE +KFNLLT
Sbjct:  212 EGEKIGDFLHYDQQGKKLLEGHFMNARLHGENIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAANGVDSKLTEYTTEGITIYEKSFRQGKPHGTWNFYAEDGKNLKLKENYEAGQLHGLRTLYYASGQKSTEETWKFNLLT 361          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: A0A0D3LDG3_9BACT (Morn variant repeat-containing protein n=1 Tax=Flammeovirgaceae bacterium 311 TaxID=1257021 RepID=A0A0D3LDG3_9BACT)

HSP 1 Score: 75.9 bits (185), Expect = 5.440e-13
Identity = 41/117 (35.04%), Postives = 67/117 (57.26%), Query Frame = 1
Query:   40 EGHLLLEGNFMNGRLHGDNTGYYADGTVKHRFNYEEGNKIGTALTYHTNGKLKLKEQPSLTGQDWVVEE--YTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGI 384
            EG  L+EG ++ G LHG N G++ +G ++H F YE+G K+GT  TY+ +  L+ K    + G+D   +E  Y    K  + K +  + P G W+++   G  E+ +E Y  GKL+G+
Sbjct:  229 EGVQLVEGQYLQGLLHGPNRGWHENGDIRHIFQYEKGKKVGTNYTYYPDSVLESK---LVVGKDGSSQEEVYWPNGKARAKKMYLAEQPEGSWKYFDQQGMLEK-EEIYSGGKLNGV 341          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: A0A6N4EH09_9RHOO (Uncharacterized protein n=1 Tax=Azospira oryzae TaxID=146939 RepID=A0A6N4EH09_9RHOO)

HSP 1 Score: 74.3 bits (181), Expect = 1.870e-12
Identity = 36/89 (40.45%), Postives = 51/89 (57.30%), Query Frame = 1
Query:  196 KLKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAKEEMYKFNLLTGPYK 462
            K KE+ +L   D   E ++     +  K  +   P+G W  Y  DGK   +KENY+NGKL G+R  Y  +G+ A EE Y+FNL+TGP +
Sbjct:  277 KSKEEVALNNIDTKEEGFSPEGIKLYEKSHRKLKPHGTWYLYAADGKNVTLKENYDNGKLHGLRTTYHANGQKATEETYQFNLITGPVR 365          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: A0A1M5PK10_9FLAO (MORN repeat variant n=1 Tax=Flavobacterium micromati TaxID=229205 RepID=A0A1M5PK10_9FLAO)

HSP 1 Score: 63.9 bits (154), Expect = 3.340e-9
Identity = 30/78 (38.46%), Postives = 44/78 (56.41%), Query Frame = 1
Query:  247 YTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAKEEMYKFNLLTGPYKTYYKTG 480
            Y      +S  +  NK   G+W++Y+ D KT    ENY  GKL G+R  ++ +GK+A+E  YK NL  G YK + + G
Sbjct:   97 YDQNSNKVSEGKLLNKLFEGEWKYYHQDSKTTMTIENYNKGKLQGLRTVFYVNGKVAEEIFYKNNLKEGLYKKFTEKG 174          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: UPI001F059C10 (toxin-antitoxin system YwqK family antitoxin n=1 Tax=Lutibacter sp. A80 TaxID=2918453 RepID=UPI001F059C10)

HSP 1 Score: 57.4 bits (137), Expect = 6.230e-7
Identity = 36/119 (30.25%), Postives = 56/119 (47.06%), Query Frame = 1
Query:   70 MNGRLHGDNTGYYADGTVKHRFNYEEGNKIGTALTYHTNGK-----LKLKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGK 411
            +NG+  G    YY +  ++++  ++ G +IG    Y   G      +K  +  S       V  Y     L S    + K   G W +YYPDGKT  I+ENY+N  L G+   Y+++GK
Sbjct:   32 LNGKRDGIWKKYYPNNNIRYQGTFKAGKEIGVFKYYDITGATHPIIIKTFKPNSAIAS---VSFYNIKGILESTGTMEGKSRIGTWRYYYPDGKTLMIEENYKNNVLDGLYKSYYKNGK 147          
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Match: UPI001F0653E0 (toxin-antitoxin system YwqK family antitoxin n=1 Tax=Lutibacter sp. A64 TaxID=2918526 RepID=UPI001F0653E0)

HSP 1 Score: 56.2 bits (134), Expect = 1.840e-6
Identity = 35/123 (28.46%), Postives = 56/123 (45.53%), Query Frame = 1
Query:   70 MNGRLHGDNTGYYADGTVKHRFNYEEGNKIGTALTYHTNGKLK------LKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHPNGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAK 420
            +NG+  G    YY +  ++++  ++ G ++G    Y      +       K   SL      V  YT    L S      K   G W +YYP+GKT  I+ENY+N +L G    Y+  GK+++
Sbjct:   32 LNGKRDGIWKKYYPNNNIRYQGTFKAGKEVGVFKYYDITNATQPTIIKTFKPNSSLA----TVNFYTVKGILKSTGTMDGKKRIGTWLYYYPNGKTLMIEENYKNNELEGSYKSYYRTGKISE 150          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57904.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
UPI0019E9EE205.420e-2739.63Uncharacterized protein n=1 Tax=Cytophagales bacte... [more]
A0A7L9BFV5_9BACT1.840e-2461.04Toxin-antitoxin system YwqK family antitoxin n=1 T... [more]
A0A136LNY9_9BACT5.360e-2437.50MORN repeat protein n=1 Tax=Bacteroidetes bacteriu... [more]
A0A7D5MIX8_9BACT1.200e-2336.88Uncharacterized protein n=1 Tax=Cyclobacteriaceae ... [more]
A0A5C7Z9J2_9BACT2.280e-2137.33Toxin-antitoxin system YwqK family antitoxin n=1 T... [more]
A0A0D3LDG3_9BACT5.440e-1335.04Morn variant repeat-containing protein n=1 Tax=Fla... [more]
A0A6N4EH09_9RHOO1.870e-1240.45Uncharacterized protein n=1 Tax=Azospira oryzae Ta... [more]
A0A1M5PK10_9FLAO3.340e-938.46MORN repeat variant n=1 Tax=Flavobacterium microma... [more]
UPI001F059C106.230e-730.25toxin-antitoxin system YwqK family antitoxin n=1 T... [more]
UPI001F0653E01.840e-628.46toxin-antitoxin system YwqK family antitoxin n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57904contigP-wetherbeei_contig57904:1..507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog983548.Krodi_0026
PFAMsMORN_2
Model size507
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.96e-11
EggNOG OGsCOG2849@1|root,COG2849@2|Bacteria,4NP2Z@976|Bacteroidetes,1I22V@117743|Flavobacteriia,37E6X@326319|Dokdonia
Descriptionprotein conserved in bacteria
Cds size507
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186858.5484176-CDS-P-wetherbeei_contig57904:0..5071683186858.5484176-CDS-P-wetherbeei_contig57904:0..507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57904 1..507 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57904.1.1prot_P-wetherbeei_contig57904.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57904 1..507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57904.1.1

>prot_P-wetherbeei_contig57904.1.1 ID=prot_P-wetherbeei_contig57904.1.1|Name=mRNA_P-wetherbeei_contig57904.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
EGSKNGEFKNYDREGHLLLEGNFMNGRLHGDNTGYYADGTVKHRFNYEEG
NKIGTALTYHTNGKLKLKEQPSLTGQDWVVEEYTDADKLISVKRFKNKHP
NGQWEFYYPDGKTERIKENYENGKLSGIRHEYFEDGKLAKEEMYKFNLLT
GPYKTYYKTGGVEAEGELR
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mRNA from alignment at P-wetherbeei_contig57904:1..507+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57904.1.1 ID=mRNA_P-wetherbeei_contig57904.1.1|Name=mRNA_P-wetherbeei_contig57904.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57904:1..507+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGGCTCTAAAAATGGTGAATTTAAAAACTACGATCGCGAAGGTCATTT GCTGCTGGAAGGAAACTTTATGAACGGACGTTTACATGGCGACAATACAG GATATTATGCTGATGGAACAGTCAAACATAGATTCAACTACGAAGAAGGA AACAAGATTGGTACTGCCCTCACCTATCACACCAATGGAAAGCTGAAATT AAAAGAACAACCTTCACTAACCGGGCAAGATTGGGTTGTTGAAGAATATA CTGACGCAGATAAACTTATATCGGTCAAACGATTTAAGAATAAGCATCCT AATGGCCAATGGGAATTTTATTATCCGGACGGAAAAACTGAGCGCATTAA AGAAAACTATGAGAATGGAAAACTCTCCGGCATTCGGCATGAATATTTCG AAGACGGAAAGCTTGCCAAAGAAGAAATGTATAAATTCAATTTGCTTACC GGGCCTTACAAAACCTATTATAAAACCGGTGGCGTAGAAGCCGAAGGTGA ACTTCGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57904:1..507+

>mRNA_P-wetherbeei_contig57904.1.1 ID=mRNA_P-wetherbeei_contig57904.1.1|Name=mRNA_P-wetherbeei_contig57904.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57904:1..507+ (Phaeothamnion wetherbeei SAG_119_79)
GAAGGCTCTAAAAATGGTGAATTTAAAAACTACGATCGCGAAGGTCATTT
GCTGCTGGAAGGAAACTTTATGAACGGACGTTTACATGGCGACAATACAG
GATATTATGCTGATGGAACAGTCAAACATAGATTCAACTACGAAGAAGGA
AACAAGATTGGTACTGCCCTCACCTATCACACCAATGGAAAGCTGAAATT
AAAAGAACAACCTTCACTAACCGGGCAAGATTGGGTTGTTGAAGAATATA
CTGACGCAGATAAACTTATATCGGTCAAACGATTTAAGAATAAGCATCCT
AATGGCCAATGGGAATTTTATTATCCGGACGGAAAAACTGAGCGCATTAA
AGAAAACTATGAGAATGGAAAACTCTCCGGCATTCGGCATGAATATTTCG
AAGACGGAAAGCTTGCCAAAGAAGAAATGTATAAATTCAATTTGCTTACC
GGGCCTTACAAAACCTATTATAAAACCGGTGGCGTAGAAGCCGAAGGTGA
ACTTCGC
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