mRNA_P-wetherbeei_contig5786.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: A0A6H5KQ72_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KQ72_9PHAE) HSP 1 Score: 298 bits (764), Expect = 4.660e-95 Identity = 160/305 (52.46%), Postives = 208/305 (68.20%), Query Frame = 1
Query: 1 MDDEPPSLLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFRAQGRSLPNGAVSSGDLQNCLVNGL-----RTLAADDGAAERGERPGTRLLPGPAMAKAMSQSLCYINRLKLEAAAVQA---RLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSEPGLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRAKPPQVVR 891
MD+E PSLL+I+LDAS W RE R Q P + ++++FQ+T+EA L+F+ESYL+MHR N+V F+A + S +++P P + RSL G+VS+ + QNCL +GL R AAD AA G+ G A+A ++S+ LCY+N+ E++++QA R LVL G DV E YNS+MN IFSAQKA V VDC VL S FLQQAAYL+GG Y GL + ATFLPS SCR+YL LR Q+S+DFRAACFCH+RVV++AYVCSVCLSVFC FSP+C+TCGTRA P ++ R
Sbjct: 5 MDEEEPSLLLIILDASSAFWTKREAVRRRQKQRPESGEVKLSSFQDTVEATLMFVESYLMMHRRNEVCFVACTARESTIIFPTPAMEREQRSLGRGSVSTKEFQNCLWDGLGRVVERGHAAD--AAGGGDE-------GCALAGSLSKGLCYVNKKMRESSSIQASPARALVLSGSPDVPETYNSVMNAIFSAQKAGVLVDCAVLGES-STFLQQAAYLTGGLYLEHQGVGLAQYMFATFLPSQSCRKYLKLRTQQSVDFRAACFCHKRVVDIAYVCSVCLSVFCEFSPVCTTCGTRAWPKKIKR 299
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: A0A835ZC01_9STRA (Putative general transcription factor IIH subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZC01_9STRA) HSP 1 Score: 283 bits (723), Expect = 2.540e-89 Identity = 149/290 (51.38%), Postives = 192/290 (66.21%), Query Frame = 1
Query: 7 DEPPSLLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFRAQGRSLPNGAVSSGDLQNCLVNGLRTLAADDGAAERGERPGTRLLPGPAMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSEPGLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRAKP 876
DE PSLLV+V DAS W ++ L G+ V TFQ TLEA++VFL+SYLLMHR ND+A +A GSR+++P P SL G VSS +Q+C+V+GLR L + +P +AKA+SQ+LC+ +R E +VQ RLLV+Q D E YN++MNCIFSAQKAQ+PVDC + S+F+QQAA ++GG Y EP +L LL LPS +CR+YL + QE++DFRAACFCHRR++E+AYVCSVCLSVFC FSPIC+TCGTRA P
Sbjct: 2 DEDPSLLVVVFDASQGAWAAKDA--LAAQGST------VGTFQGTLEAMMVFLQSYLLMHRRNDIAVVACGEAGSRMVFPTPAIEKDNVSLATGGVSSKRVQSCIVDGLRELMSASACGTASVQPAVS--SKAPIAKALSQALCFTHRKITENPSVQTRLLVVQAGPDAPESYNAVMNCIFSAQKAQIPVDC-LCVGPDSVFMQQAADVTGGVYCHVQEPNVLQQLLTLILPSQACRKYLRTKGQETVDFRAACFCHRRLIEIAYVCSVCLSVFCEFSPICATCGTRAVP 280
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: A0A8K1C5A8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5A8_PYTOL) HSP 1 Score: 214 bits (546), Expect = 4.660e-62 Identity = 128/286 (44.76%), Postives = 170/286 (59.44%), Query Frame = 1
Query: 22 LLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFRAQGRSLPNGAVSSGDLQNCLVNGLRTLAADDGAAERGERPGTRLLPGP-AMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSE-PGLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRAK 873
LLVIV+D + W N L+ + +FQ+ + + LVF+ SYLL+HR N + IAA S +LYP P AQ A S + N ++ L+ L+ E P P A+A ++S+SLC+INR E A + R+LV+Q DV+EHY SIMN IFSAQK V VD C+L+ HS F+QQAAYL+GG Y+ ++ GLL LL+ +LP S R+ L L Q+S+DFRA CFCH+ VV AYVC VCLS+FC F PICSTCG R++
Sbjct: 70 LLVIVIDTNPQQWF----------ANAKLQNAQTQSFQQLISSTLVFVNSYLLLHRNNRIVIIAAHAGRSEMLYPDP---AQ-NDTSGTAEQSLKVTNRVMEKLKALS---------EIPMDPSKPNATAIAASISRSLCFINRAITENADLSPRILVIQKSPDVSEHYISIMNGIFSAQKKNVAVDACILSREHSPFMQQAAYLTGGIYYKPNDHSGLLEYLLSIYLPDPSLRKLLKLPTQDSVDFRAMCFCHQEVVSTAYVCPVCLSLFCEFKPICSTCGIRSR 332
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: A0A5D6XQC8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQC8_9STRA) HSP 1 Score: 209 bits (533), Expect = 1.200e-60 Identity = 124/286 (43.36%), Postives = 168/286 (58.74%), Query Frame = 1
Query: 22 LLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFRAQGRSLPNGAVSSGDLQNCLVNGLRTLAADDGAAERGERPGTRLLPGP-AMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSE-PGLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRAK 873
LLV+VLD + W R DG S FQ+ + + LVF+ +YLL+HR N + +AA + +LYP A+ + A S + ++ LR L G P P A+A ++S++LC+INR E + ++ R+LV+Q DVA+HY SIMN IFSAQK V VD CVLA+ HS FLQQAAYL+GG Y+ + GLL LL+ +LP S R+ L L Q+S+DFRA CFCH+ V+ A+VC VCLS+FC F PICSTCG R++
Sbjct: 29 LLVLVLDTNPRYWFAEGQAR---DGGDS-------AFQQLVASTLVFVNAYLLLHRSNRIVVVAAHAGRAEMLYPD----AEQQDTSGSAEQSAKVNTSVLQKLRAL---------GNAPIDASKPNATAIAASLSRALCFINRAIREQSDLRPRVLVIQKSPDVAQHYISIMNGIFSAQKKSVAVDACVLASEHSSFLQQAAYLTGGIYYKPIDHSGLLQYLLSIYLPDPSMRKLLKLPSQDSVDFRAMCFCHKEVISTAFVCPVCLSLFCEFQPICSTCGIRSR 291
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: H3GBC5_PHYRM (Uncharacterized protein n=17 Tax=Phytophthora TaxID=4783 RepID=H3GBC5_PHYRM) HSP 1 Score: 209 bits (532), Expect = 1.300e-60 Identity = 125/285 (43.86%), Postives = 167/285 (58.60%), Query Frame = 1
Query: 22 LLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFR-AQGRSLPNGAVSSGDLQNCLVNGLRTLAADDGAAERGERPGTRLLPGPAMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSEP-GLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRA 870
LLV+V+D S W Q G + + A Q+ + + LVF+ SYLL+HR N + IAA S +LYP PE G + V++G +Q + L D R A+A ++S++LC+INR E ++ R+LV+Q DV+EHY +IMN IFSAQK V VD C+LAA HS F+QQAAYL+GG Y+ + P GLL L++ +LP S R+ L L Q+S+DFRA CFCHR V+ AYVC VCLS+FC F PICSTCG R+
Sbjct: 21 LLVLVVDTSPVHW-------FAQGGGAADR----AGLQQLISSTLVFVNSYLLLHRSNRIVIIAAHAGKSAMLYPDPEQEDTSGNAEQAAKVNAGVMQR--LQQLSDAPLDPAKPNR-----------TAIAASISRALCFINRAINEEPDLRPRILVVQKSPDVSEHYIAIMNGIFSAQKKSVAVDACILAAEHSSFMQQAAYLTGGIYYKPNGPSGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAYVCPVCLSLFCEFRPICSTCGIRS 281
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: K3WG36_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WG36_GLOUD) HSP 1 Score: 207 bits (527), Expect = 1.070e-59 Identity = 125/286 (43.71%), Postives = 168/286 (58.74%), Query Frame = 1
Query: 22 LLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFRAQGRSLPNGAVSSGDLQNCLVNGLRTLAADDGAAERGERPGTRLLPGP-AMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSE-PGLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRAK 873
LLV+V+D + W E G P FQ+ + + LVF+ SYLL+HR N + IAA + +LYP P QG A S + ++ L+ L+ E P P A+A ++S++LC+INR E + ++ R+LV+Q DV+EHY SIMN IFSAQK V VD CVLA S FLQQAAYL+GG Y+ ++ GLL LL+ +LP S R+ L L Q+S+DFRA CFCH+RV+ A+VC VCLS+FC F PICSTCG R++
Sbjct: 33 LLVLVVDTNPQYWFVNE---QRSGGGPQ-------AFQQLVASTLVFVNSYLLLHRSNRIVIIAAHAGKAEMLYPDPN---QG-DTSGSAEQSAKVNAKVMQKLQALS---------ELPVDPAKPNATAIAASISRALCFINRAINEQSDLRPRILVIQKSPDVSEHYISIMNGIFSAQKKGVAVDACVLARDQSSFLQQAAYLTGGIYYKPNDHSGLLQYLLSIYLPDPSMRKLLKLPSQDSVDFRAMCFCHKRVISTAFVCPVCLSLFCEFQPICSTCGIRSR 295
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: A0A662YF30_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662YF30_9STRA) HSP 1 Score: 205 bits (522), Expect = 4.810e-59 Identity = 123/286 (43.01%), Postives = 167/286 (58.39%), Query Frame = 1
Query: 22 LLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFRAQGRSLPNGAVSSGDLQNCLVN-GLRTLAADDGAAERGERPGTRLLPGPAMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSEPG-LLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRAK 873
LLV+V+D + W Q G S + FQ+ + + LVF+ SYLL+HR N + IAA S +LYP P+ S Q VN G+ + G AE R A+A ++S+SLC+INR + ++ R+LV+Q DV+EHY +IMN IFSAQK V VD C+L+A HS F+QQAAYL+GG Y+ ++ G LL L++ +LP S R+ L L Q+S+DFRA CFCHR V+ A+VC VCLS+FC F PICSTCG R++
Sbjct: 28 LLVLVIDTNPLHW-------FAQGGGTSDR----TAFQQLISSTLVFVNSYLLLHRSNRIVIIAAHAGKSAMLYPDPD---------QADTSGSAEQAAKVNAGVMRRLQELGDAELDPAKPNRT----AIAASLSRSLCFINRAINDQPDLRPRILVIQKAPDVSEHYIAIMNGIFSAQKKSVAVDACILSAEHSSFMQQAAYLTGGIYYKPNDAGGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAFVCPVCLSLFCEFRPICSTCGIRSR 289
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: W7U2D9_9STRA (General transcription factor iih n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U2D9_9STRA) HSP 1 Score: 207 bits (527), Expect = 1.030e-58 Identity = 143/395 (36.20%), Postives = 197/395 (49.87%), Query Frame = 1
Query: 1 MDDEPPSLLVIVLDASLPLWRTREITRLHQDGN-------PSLKQPRV-ATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPP--------EFRAQGR---------------------------------------------------SLPNGAVSSGDLQNCLVNGLRTLAAD------DGAAERGERPGTR-----------LLPGPAMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSM-----FLQQAAYLSGGFYHSSSEP-GLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRAKPPQVVRRGR*SRAQ 915
++ E P++LVIV+DA W+ R+H G PS + P++ TF L+ L+VF+++YLL HR N VA +AA S LYPPP +++G S P+G S + + + GL+ L A DG G PG R L P ++A+S+SLCYI R E+ ++ AR+LVLQ AD YN+ MNC FSAQ++ VP+D V ++ S+ FLQQA+Y++GG Y P LL L FLPS R+ L L +QES+DFRAACFCHR+ VE AYVCSVCLS+FCAF+P C+TCGT A+P + +G R++
Sbjct: 6 LEAEEPNILVIVIDADPASWQ-----RIHSAGELARPQDRPSSEAPQIFMTFPHLLDTLMVFIDAYLLTHRANRVAVVAALHDKSDFLYPPPVPAXXXXXXXKSEGPTKAPVIKLEKMVYEAACDQHATVAAVEGGQDGVDALKTNGATSKGPPLAPVSPPSGGSESERVSHAVTRGLQRLLAPTSAVALDGPEVSG--PGARXXXXXXXXXXSLRPVSRTSQALSKSLCYIQRALRESPSLSARMLVLQASADAHGDYNAFMNCTFSAQRSSVPIDAAVFSSPASVHKDSSFLQQASYITGGVYVRPDRPEALLQYFLHLFLPSHHLRQALRLPKQESVDFRAACFCHRKAVEQAYVCSVCLSIFCAFAPECATCGTPARPLKGSGKGAGRRSR 393
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: A0A3M6VU71_9STRA (Uncharacterized protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VU71_9STRA) HSP 1 Score: 203 bits (517), Expect = 1.970e-58 Identity = 119/295 (40.34%), Postives = 170/295 (57.63%), Query Frame = 1
Query: 22 LLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFRAQGRSLPNGAVSSGDLQNCLVNGLRTLAADDGAAERGERPGTRLLPGPAMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSE-PGLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRAK-PPQVVRRGR 900
LLV+V+D + W + GN + + FQ+ + + LVF+ SYLL+HR N + IAA S +LYP P A S + ++ L+ L+ + R A+A ++S++LC+INR E ++ R+LV+Q DV+EHY +IMN IFSAQK V VD C+LA+ S F+QQAAYL+GG Y+ ++ GLL L++ +LP S R+ L L Q+S+DFRA CFCHR V+ A+VC VCLS+FC F PICSTCG R+ P ++G+
Sbjct: 18 LLVLVIDTNPTNWFAQ--------GNEAADR---GNFQQLISSTLVFVNSYLLLHRSNRIVIIAAHAGKSAMLYPNPAHD----DTSGSAEQSAKVNAVVMQRLQELSDTPMDCTKPNRT--------AIAASLSRALCFINRAMNEEPDLRPRILVVQKSPDVSEHYIAIMNGIFSAQKKNVAVDACILASEQSSFMQQAAYLTGGIYYKPNDHSGLLQYLISIYLPDPSMRKLLKLPSQDSVDFRAMCFCHREVISTAFVCPVCLSLFCQFQPICSTCGIRSHIEPMGTKKGK 289
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Match: A0A421GZV4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GZV4_9STRA) HSP 1 Score: 203 bits (516), Expect = 2.940e-58 Identity = 121/285 (42.46%), Postives = 165/285 (57.89%), Query Frame = 1
Query: 22 LLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEALLVFLESYLLMHRGNDVAFIAASRTGSRVLYPPPEFRAQGRSLPNGA-VSSGDLQNCLVNGLRTLAADDGAAERGERPGTRLLPGPAMAKAMSQSLCYINRLKLEAAAVQARLLVLQGEADVAEHYNSIMNCIFSAQKAQVPVDCCVLAAGHSMFLQQAAYLSGGFYHSSSE-PGLLPALLATFLPSASCRRYLSLRRQESIDFRAACFCHRRVVEVAYVCSVCLSVFCAFSPICSTCGTRA 870
LLV+V+D + W + P+ + A Q+ + + LVF+ SYLL+HR N + IAA S +LYP P S A V++G +Q + L D R A+A A+S+SLC+INR E ++ R+LV+Q D++EHY +IMN IFSAQK V VD C+LA+ S F+QQAAYL+GG Y+ ++ GLL L++ +LP S R+ L L Q+S+DFRA CFCHR V+ AYVC VCLS+FC F PICSTCG R+
Sbjct: 20 LLVLVIDTNPVHW-------FAEGAGPADR----AGLQQLISSTLVFVNSYLLLHRSNRIVIIAAHAGKSAMLYPDPNQEDTSGSAEQAAKVNAGVMQR--LQELSDAPLDPAKPNR-----------TAIAAALSRSLCFINRAINEEPELKPRILVIQKSPDMSEHYIAIMNGIFSAQKRSVAVDACILASEQSSFMQQAAYLTGGIYYKPNDHSGLLQYLISIYLPDPSTRKLLKLPSQDSVDFRAMCFCHREVISTAYVCPVCLSLFCEFRPICSTCGIRS 280 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5786.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5786.1.1 >prot_P-wetherbeei_contig5786.1.1 ID=prot_P-wetherbeei_contig5786.1.1|Name=mRNA_P-wetherbeei_contig5786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=301bp MDDEPPSLLVIVLDASLPLWRTREITRLHQDGNPSLKQPRVATFQETLEAback to top mRNA from alignment at P-wetherbeei_contig5786:551..2390+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5786.1.1 ID=mRNA_P-wetherbeei_contig5786.1.1|Name=mRNA_P-wetherbeei_contig5786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1840bp|location=Sequence derived from alignment at P-wetherbeei_contig5786:551..2390+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5786:551..2390+ >mRNA_P-wetherbeei_contig5786.1.1 ID=mRNA_P-wetherbeei_contig5786.1.1|Name=mRNA_P-wetherbeei_contig5786.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=903bp|location=Sequence derived from alignment at P-wetherbeei_contig5786:551..2390+ (Phaeothamnion wetherbeei SAG_119_79)back to top |