mRNA_P-wetherbeei_contig57835.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57835.1.1
Unique NamemRNA_P-wetherbeei_contig57835.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: PDRP_BRADU (Putative pyruvate, phosphate dikinase regulatory protein n=198 Tax=Bradyrhizobiaceae TaxID=41294 RepID=PDRP_BRADU)

HSP 1 Score: 321 bits (823), Expect = 2.700e-109
Identity = 162/164 (98.78%), Postives = 163/164 (99.39%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            +P SNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI
Sbjct:    1 MPTSNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 164
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BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: UPI0020119F18 (kinase/pyrophosphorylase n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI0020119F18)

HSP 1 Score: 306 bits (785), Expect = 1.690e-103
Identity = 154/164 (93.90%), Postives = 158/164 (96.34%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            VP + NYFHLHLVSDSTGETLITVARAVAAQYANVT VEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLV RLE KCK IN+PSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGL+DAD+VLVGVSRTSKTPTSI
Sbjct:    2 VPTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTAVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVGRLETKCKDINIPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLEDADIVLVGVSRTSKTPTSI 165
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BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: UPI0020126F5F (kinase/pyrophosphorylase n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI0020126F5F)

HSP 1 Score: 305 bits (780), Expect = 9.400e-103
Identity = 152/164 (92.68%), Postives = 158/164 (96.34%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            VP + NYFHLHLVSDSTGETLITVARAVAAQYANVT VEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLV RLE KC+ IN+PSLSIIGPVMQ+FEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGL+DAD+VLVGVSRTSKTPTSI
Sbjct:    2 VPTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTAVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVGRLETKCRDINIPSLSIIGPVMQMFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLEDADIVLVGVSRTSKTPTSI 165
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BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: A0A1B9YSK7_9BRAD (Putative pyruvate, phosphate dikinase regulatory protein n=32 Tax=Bradyrhizobium TaxID=374 RepID=A0A1B9YSK7_9BRAD)

HSP 1 Score: 302 bits (774), Expect = 7.690e-102
Identity = 151/164 (92.07%), Postives = 159/164 (96.95%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            +P + NYFHLHLVSDSTGETLITVARAVAAQYANVT VEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLV+RLE KC+ IN+PSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTM+HDDGQHVEGL++ADVVLVGVSRTSKTPTSI
Sbjct:    1 MPTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTAVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVARLEAKCRNINIPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMMHDDGQHVEGLEEADVVLVGVSRTSKTPTSI 164
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BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: A0A1E3EHR7_BRAEL (Putative pyruvate, phosphate dikinase regulatory protein n=74 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A1E3EHR7_BRAEL)

HSP 1 Score: 301 bits (771), Expect = 2.130e-101
Identity = 151/164 (92.07%), Postives = 159/164 (96.95%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            +P ++NYFHLHLVSDSTGETLITVARAVAAQYANVT VEHVYPLVRSQKQLDRVLDEIEE+PGIVLFTLLEKDLV RLE KCK INVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYF+RIDALNYTM+HDDGQHVEGL++ADVVLVGVSRTSKTPTSI
Sbjct:    1 MPTTSNYFHLHLVSDSTGETLITVARAVAAQYANVTAVEHVYPLVRSQKQLDRVLDEIEESPGIVLFTLLEKDLVGRLEGKCKEINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFRRIDALNYTMMHDDGQHVEGLEEADVVLVGVSRTSKTPTSI 164
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BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: A0A537SIX6_9PROT (Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537SIX6_9PROT)

HSP 1 Score: 299 bits (765), Expect = 1.800e-100
Identity = 150/164 (91.46%), Postives = 157/164 (95.73%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            +P S +YFHLHLVSDSTGETLITVARAVAAQYANVT VEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLV RLE KC+ IN+PSLSIIGPVMQLF+AYLGAATTGRVGAQH LNAEYFKRIDALNYTM+HDDGQHVEGL+DADVVLVGVSRTSKTPTSI
Sbjct:    1 MPTSGSYFHLHLVSDSTGETLITVARAVAAQYANVTAVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVGRLEAKCQQINIPSLSIIGPVMQLFQAYLGAATTGRVGAQHTLNAEYFKRIDALNYTMMHDDGQHVEGLEDADVVLVGVSRTSKTPTSI 164
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BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: A0A537UH66_9PROT (Phosphoenolpyruvate synthase regulatory protein (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537UH66_9PROT)

HSP 1 Score: 295 bits (754), Expect = 2.200e-100
Identity = 147/164 (89.63%), Postives = 156/164 (95.12%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            +P + NYFHLHLVSDSTGETLITVARAVAAQYANVT VEHVYPLVRSQKQLDRVL+EIEEAPGIVLFTLLEKDLV RLE KC+ IN+PSLSIIGPVMQLF+AYLGA TTGRVGAQH LNAEYFKRIDALNYTM+HDDGQHVEGL++ADVVLVGVSRTSKTPTSI
Sbjct:    1 MPTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTAVEHVYPLVRSQKQLDRVLEEIEEAPGIVLFTLLEKDLVGRLEAKCQQINIPSLSIIGPVMQLFQAYLGAPTTGRVGAQHTLNAEYFKRIDALNYTMMHDDGQHVEGLEEADVVLVGVSRTSKTPTSI 164
[Close]
BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: PDRP_BRASO (Putative pyruvate, phosphate dikinase regulatory protein n=10 Tax=Bradyrhizobiaceae TaxID=41294 RepID=PDRP_BRASO)

HSP 1 Score: 297 bits (760), Expect = 1.040e-99
Identity = 149/164 (90.85%), Postives = 157/164 (95.73%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            +P + NYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLE KC+ IN+PSLSIIGPVMQLFEAYLGA+T GRVGAQHVLNAEYF RIDALNYTM+HDDGQ V+GL+DADVVLVGVSRTSKTPTSI
Sbjct:    1 MPTTGNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEAKCQQINIPSLSIIGPVMQLFEAYLGASTAGRVGAQHVLNAEYFARIDALNYTMLHDDGQMVDGLEDADVVLVGVSRTSKTPTSI 164
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BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: A0A533J4J6_9BRAD (Putative pyruvate, phosphate dikinase regulatory protein n=5 Tax=Bradyrhizobium TaxID=374 RepID=A0A533J4J6_9BRAD)

HSP 1 Score: 297 bits (760), Expect = 1.040e-99
Identity = 148/164 (90.24%), Postives = 157/164 (95.73%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            +P S NYFHLHLVSDSTGETLITVARAV AQYANV+ VEHVYPLVRSQKQLDRVL+EIEEAPGIVLFTLLEKDLV RLE KC+ +N+PSLSIIGPVMQLFEAYLGAATTG+VGAQHVLNAEYF+RIDALNYTMIHDDGQHVEGL+DADVVLVGVSRTSKTPTSI
Sbjct:    1 MPTSGNYFHLHLVSDSTGETLITVARAVTAQYANVSAVEHVYPLVRSQKQLDRVLNEIEEAPGIVLFTLLEKDLVHRLETKCRDMNIPSLSIIGPVMQLFEAYLGAATTGKVGAQHVLNAEYFRRIDALNYTMIHDDGQHVEGLEDADVVLVGVSRTSKTPTSI 164
[Close]
BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Match: A0A1Q4C3J5_9HYPH (Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Rhizobiales bacterium 62-47 TaxID=1895811 RepID=A0A1Q4C3J5_9HYPH)

HSP 1 Score: 296 bits (758), Expect = 2.090e-99
Identity = 148/164 (90.24%), Postives = 156/164 (95.12%), Query Frame = 1 
Query:    1 VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLFEAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVVLVGVSRTSKTPTSI 492
            +P S +YFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVL EIEEAPGIVLFTLLE DLV RLE KCK IN+PSLSIIGPVMQLF AYLGA+TTGRVGAQHVLNA+YFKRIDALNYTM+HDDGQHVEGL++ADVVLVGVSRTSKTPTSI
Sbjct:    1 MPTSGSYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQLDRVLAEIEEAPGIVLFTLLENDLVERLEGKCKEINIPSLSIIGPVMQLFHAYLGASTTGRVGAQHVLNADYFKRIDALNYTMLHDDGQHVEGLEEADVVLVGVSRTSKTPTSI 164
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57835.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
PDRP_BRADU2.700e-10998.78Putative pyruvate, phosphate dikinase regulatory p... [more]
UPI0020119F181.690e-10393.90kinase/pyrophosphorylase n=2 Tax=unclassified Brad... [more]
UPI0020126F5F9.400e-10392.68kinase/pyrophosphorylase n=2 Tax=unclassified Brad... [more]
A0A1B9YSK7_9BRAD7.690e-10292.07Putative pyruvate, phosphate dikinase regulatory p... [more]
A0A1E3EHR7_BRAEL2.130e-10192.07Putative pyruvate, phosphate dikinase regulatory p... [more]
A0A537SIX6_9PROT1.800e-10091.46Putative pyruvate, phosphate dikinase regulatory p... [more]
A0A537UH66_9PROT2.200e-10089.63Phosphoenolpyruvate synthase regulatory protein (F... [more]
PDRP_BRASO1.040e-9990.85Putative pyruvate, phosphate dikinase regulatory p... [more]
A0A533J4J6_9BRAD1.040e-9990.24Putative pyruvate, phosphate dikinase regulatory p... [more]
A0A1Q4C3J5_9HYPH2.090e-9990.24Putative pyruvate, phosphate dikinase regulatory p... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57835contigP-wetherbeei_contig57835:18..509 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog936455.KI421499_gene6609
Preferred nameMA20_24795
PFAMsKinase-PPPase
Model size492
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K09773
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.55e-110
EggNOG OGsCOG1806@1|root,COG1806@2|Bacteria,1MUHU@1224|Proteobacteria,2TT66@28211|Alphaproteobacteria,3JUGI@41294|Bradyrhizobiaceae
EC2.7.11.33,2.7.4.28
DescriptionBifunctional serine threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation dephosphorylation
Cds size492
COG categoryS
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186857.0848765-CDS-P-wetherbeei_contig57835:17..5091683186857.0848765-CDS-P-wetherbeei_contig57835:17..509Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57835 18..509 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57835.1.1prot_P-wetherbeei_contig57835.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57835 18..509 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57835.1.1

>prot_P-wetherbeei_contig57835.1.1 ID=prot_P-wetherbeei_contig57835.1.1|Name=mRNA_P-wetherbeei_contig57835.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=164bp
VPASNNYFHLHLVSDSTGETLITVARAVAAQYANVTPVEHVYPLVRSQKQ
LDRVLDEIEEAPGIVLFTLLEKDLVSRLEDKCKGINVPSLSIIGPVMQLF
EAYLGAATTGRVGAQHVLNAEYFKRIDALNYTMIHDDGQHVEGLDDADVV
LVGVSRTSKTPTSI
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mRNA from alignment at P-wetherbeei_contig57835:18..509+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57835.1.1 ID=mRNA_P-wetherbeei_contig57835.1.1|Name=mRNA_P-wetherbeei_contig57835.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig57835:18..509+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCCGGCCTCGAACAATTATTTCCATCTGCACCTGGTCTCCGACTCCAC
GGGCGAGACGCTGATCACCGTCGCGCGTGCCGTCGCCGCGCAATACGCCA
ACGTCACTCCGGTGGAGCATGTCTATCCGCTGGTGCGCAGCCAGAAGCAG
CTCGATCGCGTGCTCGACGAGATCGAGGAGGCGCCCGGCATCGTACTGTT
CACGCTGCTGGAGAAGGATCTGGTCTCCAGGCTCGAGGACAAGTGCAAGG
GCATCAATGTTCCGAGCCTGTCGATCATCGGTCCGGTGATGCAGCTGTTC
GAAGCCTATCTCGGCGCTGCCACCACCGGCCGCGTCGGCGCCCAGCACGT
TCTCAACGCGGAATATTTCAAGCGTATCGATGCGCTGAACTACACGATGA
TCCATGACGACGGCCAGCATGTCGAAGGCCTCGACGATGCCGACGTCGTC
CTGGTCGGTGTCTCCCGGACCTCCAAGACGCCGACCTCGATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57835:18..509+

>mRNA_P-wetherbeei_contig57835.1.1 ID=mRNA_P-wetherbeei_contig57835.1.1|Name=mRNA_P-wetherbeei_contig57835.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=492bp|location=Sequence derived from alignment at P-wetherbeei_contig57835:18..509+ (Phaeothamnion wetherbeei SAG_119_79)
GTGCCGGCCTCGAACAATTATTTCCATCTGCACCTGGTCTCCGACTCCAC
GGGCGAGACGCTGATCACCGTCGCGCGTGCCGTCGCCGCGCAATACGCCA
ACGTCACTCCGGTGGAGCATGTCTATCCGCTGGTGCGCAGCCAGAAGCAG
CTCGATCGCGTGCTCGACGAGATCGAGGAGGCGCCCGGCATCGTACTGTT
CACGCTGCTGGAGAAGGATCTGGTCTCCAGGCTCGAGGACAAGTGCAAGG
GCATCAATGTTCCGAGCCTGTCGATCATCGGTCCGGTGATGCAGCTGTTC
GAAGCCTATCTCGGCGCTGCCACCACCGGCCGCGTCGGCGCCCAGCACGT
TCTCAACGCGGAATATTTCAAGCGTATCGATGCGCTGAACTACACGATGA
TCCATGACGACGGCCAGCATGTCGAAGGCCTCGACGATGCCGACGTCGTC
CTGGTCGGTGTCTCCCGGACCTCCAAGACGCCGACCTCGATC
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