mRNA_P-wetherbeei_contig5780.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: A0A3M6UEY3_POCDA (U1-type domain-containing protein n=4 Tax=Pocilloporidae TaxID=46729 RepID=A0A3M6UEY3_POCDA) HSP 1 Score: 85.5 bits (210), Expect = 4.790e-13 Identity = 39/80 (48.75%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 2839 ELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYV 3078
E++ ++GYF V NQ +Q G PTLL LC+LPF+YFSD R+VLFPTL+AAC ++ N+ + EQ+V+ A L +Y+
Sbjct: 1299 EVILVVGYFTVLNNDNQVFVQTGRPPTLLQHLCSLPFQYFSDPRLRNVLFPTLIAACFENEENKKIIEQEVSCALLENYI 1378
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: A0A1Y1HSX8_KLENI (SCAPER_N domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HSX8_KLENI) HSP 1 Score: 84.7 bits (208), Expect = 9.650e-13 Identity = 39/80 (48.75%), Postives = 57/80 (71.25%), Query Frame = 1
Query: 2839 ELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYV 3078
E + L+GYFA+ +NQ VL+WG +PT+L +LC LPF YFSD A + +LF TL++AC GSD NR V E++++ L ++
Sbjct: 2561 ETLLLVGYFALLHPSNQAVLRWGKSPTILQKLCELPFPYFSDAALQPLLFGTLLSACYGSDRNRDVVERELSADMLLSFL 2640
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: K9K9V7_HORSE (S phase cyclin A-associated protein in the endoplasmic reticulum-like protein (Fragment) n=1 Tax=Equus caballus TaxID=9796 RepID=K9K9V7_HORSE) HSP 1 Score: 77.4 bits (189), Expect = 1.040e-12 Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 2824 EACFGELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYV 3078
E+ E++ +GYF V NQ ++Q G PT+L +LC LPF+YFSD VLFP+L+AAC + N+ + EQ+++ LA ++
Sbjct: 54 ESLLHEIIVCVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNHQNKIILEQEMSCVLLATFI 138
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: A0A835YEZ9_9CHLO (SCAPER_N domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835YEZ9_9CHLO) HSP 1 Score: 83.6 bits (205), Expect = 2.000e-12 Identity = 45/92 (48.91%), Postives = 55/92 (59.78%), Query Frame = 1
Query: 2839 ELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYVVAHRRAMRCHYE 3114
E++ L+GYFAV NQ+VL WG PTLL RL +PF YF + VL PTL+AAC GS+ A+ Q + P L DYV A M HYE
Sbjct: 1277 EVLLLIGYFAVLHGPNQDVLLWGKCPTLLQRLAEVPFAYFVEPQLLQVLAPTLLAACYGSERGVAMLSQHLGPGMLRDYVAA----MLQHYE 1364
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: A0A6I9YKF0_9SAUR (S phase cyclin A-associated protein in the endoplasmic reticulum-like n=1 Tax=Thamnophis sirtalis TaxID=35019 RepID=A0A6I9YKF0_9SAUR) HSP 1 Score: 79.0 bits (193), Expect = 6.950e-12 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 2824 EACFGELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYV 3078
E E++ +GYF V NQ ++Q G PT+L +LC LPF+YFSD +LFPTL+AAC + N+ + EQ+++ LA ++
Sbjct: 199 EVLLHEVIVCVGYFTVNHSDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLIKILFPTLIAACYNNPQNKIILEQEMSSVLLATFI 283
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: UPI002026125D (S phase cyclin A-associated protein in the endoplasmic reticulum-like n=1 Tax=Sphaerodactylus townsendi TaxID=933632 RepID=UPI002026125D) HSP 1 Score: 79.7 bits (195), Expect = 9.940e-12 Identity = 37/85 (43.53%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 2824 EACFGELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYV 3078
EA E++ +GYF V NQ ++Q G PT+L +LC LPF+YFSD VLFPTL+AAC + N+ + EQ+++ LA ++
Sbjct: 317 EALLHEVIICVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPTLIAACYNNPQNKIILEQEMSSILLATFI 401
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: A0A212CRS0_CEREH (Uncharacterized protein n=1 Tax=Cervus elaphus hippelaphus TaxID=46360 RepID=A0A212CRS0_CEREH) HSP 1 Score: 76.6 bits (187), Expect = 1.140e-11 Identity = 35/85 (41.18%), Postives = 54/85 (63.53%), Query Frame = 1
Query: 2824 EACFGELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYV 3078
E+ E++ +GYF V NQ ++Q G PT+L +LC LPF+YFSD VLFP+L+AAC + N+ + EQ+++ LA ++
Sbjct: 110 ESLLHEVIVCVGYFTVNHPDNQVIVQSGRHPTVLQKLCQLPFQYFSDPRLTKVLFPSLIAACYSNLQNKIILEQEMSCVLLATFI 194
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: UPI0005283337 (S phase cyclin A-associated protein in the endoplasmic reticulum-like n=1 Tax=Eurypyga helias TaxID=54383 RepID=UPI0005283337) HSP 1 Score: 76.3 bits (186), Expect = 1.410e-11 Identity = 35/85 (41.18%), Postives = 53/85 (62.35%), Query Frame = 1
Query: 2824 EACFGELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYV 3078
E E++ +GYF V NQ ++Q G PT+L +LC LPF+YFSD VLFP+L+AAC + N+ + EQ+++ LA ++
Sbjct: 108 EGLLHEVIICVGYFTVNNTDNQIIVQSGRHPTVLQKLCQLPFQYFSDPRLIKVLFPSLIAACYNNPQNKIILEQEMSCVLLATFI 192
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: A0A834GNP1_RHOSS (Uncharacterized protein n=1 Tax=Rhododendron simsii TaxID=118357 RepID=A0A834GNP1_RHOSS) HSP 1 Score: 75.5 bits (184), Expect = 1.670e-11 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 1
Query: 2839 ELVTLLGYFAVGCRANQEVLQWGAAPTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFL 3066
E + LLGYFA+ NQ VL+WG +PT+L ++C LPF +FSD +L TLVAAC G + N+ V +Q+++ L
Sbjct: 18 ESLLLLGYFALFHLGNQSVLRWGKSPTILHKVCDLPFVFFSDPELMPILAGTLVAACFGCEQNKGVVQQELSTDML 93
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Match: A0A6H5J638_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J638_9PHAE) HSP 1 Score: 80.5 bits (197), Expect = 1.700e-11 Identity = 42/94 (44.68%), Postives = 59/94 (62.77%), Query Frame = 1
Query: 2824 EACFGELVTLLGYFAVGCRANQEVLQWGAA-PTLLTRLCTLPFRYFSDQARRDVLFPTLVAACLGSDTNRAVAEQDVAPAFLADYVVAHRRAMR 3102
E C ++TLLGYF + R +QEVL+ G P +L+RLC LPFRYFS+ R VL PTL + C + N AE++++ FLAD++ + A R
Sbjct: 1474 EGCLEGVLTLLGYFCLDNREHQEVLRRGGPFPAILSRLCDLPFRYFSEPRHRAVLLPTLTSICHANAGNIIAAEEELSSEFLADFLEENLEAHR 1567 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5780.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5780.1.1 >prot_P-wetherbeei_contig5780.1.1 ID=prot_P-wetherbeei_contig5780.1.1|Name=mRNA_P-wetherbeei_contig5780.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1056bp VAAAPRPLTRSAGGSANEATANSAAPLPVAETGQRKQRQKDGLANQREEVback to top mRNA from alignment at P-wetherbeei_contig5780:2..3623- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5780.1.1 ID=mRNA_P-wetherbeei_contig5780.1.1|Name=mRNA_P-wetherbeei_contig5780.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3622bp|location=Sequence derived from alignment at P-wetherbeei_contig5780:2..3623- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5780:2..3623- >mRNA_P-wetherbeei_contig5780.1.1 ID=mRNA_P-wetherbeei_contig5780.1.1|Name=mRNA_P-wetherbeei_contig5780.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=3168bp|location=Sequence derived from alignment at P-wetherbeei_contig5780:2..3623- (Phaeothamnion wetherbeei SAG_119_79)back to top |