mRNA_P-wetherbeei_contig5777.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: A0A836CC49_9STRA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC49_9STRA) HSP 1 Score: 203 bits (516), Expect = 1.580e-54 Identity = 107/191 (56.02%), Postives = 129/191 (67.54%), Query Frame = 3
Query: 1641 AEAAKPASPISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQA---------YKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYEDGRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKRRASRPLRWGG 2186
AE I L DC +KF+EREQL + WYCS CKEH+QA YK+ +WTTPDVLI+HLKRF +LPG + RQK++ LV FPVE LDLS LRR GAP+ ++ PP+YDL+ VSEH+G+LR GHYTA ARN G+WY FND HV ET + +AVSP+AYVLFY RR LRWGG
Sbjct: 243 AEDGSGKRAIPLADCFEKFLEREQLGADNQWYCSSCKEHKQASINANAIEAYKKFDIWTTPDVLILHLKRFQYLPGQY---LIHRQKIDDLVQFPVENLDLSDVLRRCGAPVHADA--PPVYDLFAVSEHSGTLRGGHYTATARNPLSGKWYGFNDGHVFETA--TQQAVSPQAYVLFYARRKG-ALRWGG 425
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: D7G0S6_ECTSI (Similar to ubiquitin specific peptidase 15 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0S6_ECTSI) HSP 1 Score: 194 bits (492), Expect = 7.120e-48 Identity = 97/181 (53.59%), Postives = 127/181 (70.17%), Query Frame = 3
Query: 1644 EAAKPASPISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYEDGRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKRRASRPLRWGG 2186
EA + + C +KF E E+L + + WYCSRCK HRQA K++ +++ PDVLIV LKRFLF PGAL +++RQKL+ V FP+EGLDL+ ++R G PIF E PP+YDL+ VSEH+GSLR+GHYTAIA+N ED +WY+FND+HV T + P YVLFY+RR+ LRW G
Sbjct: 1181 EAQNERQSVPIDSCFEKFTECEELGQSELWYCSRCKTHRQASKKLDVYSAPDVLIVVLKRFLFTPGAL---TVYRQKLDTHVSFPIEGLDLTRNIQRAGGPIFKEA--PPVYDLFAVSEHSGSLRAGHYTAIAQNSEDKKWYSFNDSHVSPTTPDKGPSSEP--YVLFYRRRSG-VLRWAG 1353
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: A0A1Y1LKC7_PHOPY (USP domain-containing protein (Fragment) n=1 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1LKC7_PHOPY) HSP 1 Score: 171 bits (433), Expect = 9.650e-46 Identity = 87/169 (51.48%), Postives = 112/169 (66.27%), Query Frame = 3
Query: 1668 ISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYEDGRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKRRASRPL 2174
I+L++CLD+F E L+E D WYC RCKEHR+A K+ LW TPD+L+ HLKRF S R KL+ LVDFP+EGLDL+ RV I E G +YDL GV +H G L GHYTA A+N+ DGRWYN+ND+ V +P+S ++ AY+LFY+RR+S PL
Sbjct: 32 ITLEECLDEFERAEILSEQDMWYCPRCKEHRRASKKFDLWKTPDILVAHLKRF-------SSSGWRRDKLDVLVDFPIEGLDLTS---RV---IQKEDGKAEIYDLIGVDDHYGGLGGGHYTAYAKNFVDGRWYNYNDSSVHVVSDPTS-VITSAAYLLFYRRRSSGPL 186
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: W7U3R5_9STRA (Ubiquitin carboxyl-terminal hydrolase 4 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U3R5_9STRA) HSP 1 Score: 187 bits (475), Expect = 9.760e-46 Identity = 94/176 (53.41%), Postives = 118/176 (67.05%), Query Frame = 3
Query: 1665 PISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYEDGRWYNFNDTHVDETCEPS--SRAVSPRAYVLFYKRRASRPLRWGG 2186
PI L+ CL+KF EREQL E DPWYC +CK+H A+K+M +W+ PDVLI+HLKRF ++ G G + R+K+E LV FPVEGLD+ +R + PPLYDLY VSEH+G L GHYTA+A+N+ D RWY FND+ V E S V+ RAYVLFYKRR L+W G
Sbjct: 1138 PIYLKQCLEKFSEREQLAETDPWYCPKCKDHVSAFKKMDVWSLPDVLILHLKRFSYVQGLYSGPT--REKIEDLVHFPVEGLDMRDVMRG-----HVDEDAPPLYDLYAVSEHSGGLGGGHYTAVAKNFRDHRWYTFNDSLVSPVNEKDVESTLVTSRAYVLFYKRRRG-SLKWAG 1305
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: A0A7R9UCQ5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UCQ5_9STRA) HSP 1 Score: 177 bits (449), Expect = 1.360e-45 Identity = 99/202 (49.01%), Postives = 131/202 (64.85%), Query Frame = 3
Query: 1608 LSQAMMEHVSVAE----AAKPASPISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYED-----GRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKRRASRPLRWGG 2186
+ +++H S E + + ISL++C ++ + REQL E D WYCSRCKEH +A+K+ LW+ P++LI+HLKRF +LPG + RQKLE LVDFP+E LD+SG + +GA G YDLY VSEH+G L GHYTA+ARN ED G W+ FND+ V + +P R V+PRAYVLFYKRR +RWGG
Sbjct: 188 IRSGIVDHSSYTEYDRHSRQERESISLRECFEQLLVREQLNETDMWYCSRCKEHVRAFKKFDLWSLPNILILHLKRFHYLPGTY---FVHRQKLEELVDFPLEALDMSGLV--LGAV---PEGTDLTYDLYAVSEHSGGLGGGHYTAVARNMEDLPDASGEWFAFNDSGVSRS-DPR-RVVTPRAYVLFYKRRGPN-VRWGG 378
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: A0A7S3HTL6_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HTL6_9STRA) HSP 1 Score: 167 bits (424), Expect = 1.560e-44 Identity = 86/185 (46.49%), Postives = 117/185 (63.24%), Query Frame = 3
Query: 1644 EAAKPASP----ISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYEDGRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKRRASRPLRWGG 2186
+ + PA+P +S+ C DKF+EREQL E + YCSRC++H K+M LW PD+L++ LKRF ++PG + R+K+ LVDFP+EGLDL Y+ + PP+YDLY VS H+G L GHYTA +N+ + +WY+FND++V T RAVS AYVLFYKRR L+W G
Sbjct: 1 DRSNPATPKKAGLSVYQCFDKFIEREQLAEAETLYCSRCQQHLAPIKKMDLWAAPDILVLQLKRFQYVPGQY---FVHREKINNLVDFPIEGLDLRKYVIGPQNEVA-----PPVYDLYAVSHHSGGLGGGHYTATCKNFLNNKWYDFNDSNVSSTSP--ERAVSSTAYVLFYKRRTG-TLKWAG 174
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: A0A7S2FLR1_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FLR1_9STRA) HSP 1 Score: 166 bits (421), Expect = 4.090e-44 Identity = 86/173 (49.71%), Postives = 109/173 (63.01%), Query Frame = 3
Query: 1668 ISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYEDGRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKRRASRPLRWGG 2186
+ L DC F EREQL + DPW+C +CK+H AYK+ LW+TPD+LI+HLKRF GA + RQK++ LV+FP++GLDLS + +G S P +YD Y VSEH G + GHYTA +N + RWY FND+HV E S V+P AYVLFYKRR RW G
Sbjct: 5 VELLDCFRLFSEREQLGKDDPWFCPKCKDHVHAYKKFDLWSTPDILIIHLKRFQHTMGA---HFVHRQKIDSLVNFPLDGLDLSEMV--LGTDTSSSRARP-VYDCYAVSEHMGGMGGGHYTATVKNMRNSRWYAFNDSHVSEA--QGSDGVTPNAYVLFYKRRDG-SARWAG 168
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: A0A7S1XMK1_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XMK1_9STRA) HSP 1 Score: 179 bits (453), Expect = 5.370e-43 Identity = 99/192 (51.56%), Postives = 121/192 (63.02%), Query Frame = 3
Query: 1626 EHVSVAEAAKPASPISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYED-----GRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKRRASRPLRWGG 2186
EH + E A + ISL+DC + REQL E D WYC+RCKEH +AYK+ LW+ PDVLI+HLKRF +LPG + RQKLE LV FP+E LD+S ++R A H YDLY VSEH+G L GHYTA+ARN + G W+ FND V +P R V+PRAYVLFYKRR + RWGG
Sbjct: 1019 EHQARKERAGERASISLRDCFSQLTVREQLNETDMWYCARCKEHVRAYKKFDLWSVPDVLILHLKRFQYLPGTY---FVHRQKLEDLVQFPLESLDMSDFVRGPVAEDVDMH-----YDLYAVSEHSGGLGGGHYTAVARNMDGLEDPTGEWFVFNDAGVSRA-DPD-RIVTPRAYVLFYKRRGA-DRRWGG 1199
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: A0A3F2RCV5_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RCV5_9STRA) HSP 1 Score: 169 bits (428), Expect = 2.230e-41 Identity = 87/167 (52.10%), Postives = 111/167 (66.47%), Query Frame = 3
Query: 1659 ASPISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTGSLRSGHYTAIARNYEDGRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKRR 2159
A PI+L +C+ KF EREQL + D WYC +CK+H +A+K+ L++ P+VLI HLKRF + A L R K+ LVDFP+EGLDLS + + H P +YDLY VSEH G L GHYTA+A+N + RW++FND+H ET S AVS RAYVLFYKRR
Sbjct: 389 AGPITLLNCVIKFTEREQLGQTDTWYCPKCKDHVRAFKKFDLFSLPNVLIFHLKRFRY---AQNSFYLHRDKISTLVDFPIEGLDLSEF-------VTGPHNGPMIYDLYAVSEHMGGLGGGHYTAVAKNPVNQRWFSFNDSHTSETSADS--AVSSRAYVLFYKRR 543
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Match: A0A8J9TBX5_PHATR (Hypothetical protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9TBX5_PHATR) HSP 1 Score: 164 bits (415), Expect = 2.520e-41 Identity = 84/169 (49.70%), Postives = 112/169 (66.27%), Query Frame = 3
Query: 1653 KPASPISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYKQMSLWTTPDVLIVHLKRFLFLPGALPGSSLFRQKLEPLVDFPVEGLDLSGYLRRVGAPIFSEHGHPPLYDLYGVSEHTG-SLRSGHYTAIARNYEDGRWYNFNDTHVDETCEPSSRAVSPRAYVLFYKR 2156
K S I LQDCL+KFME EQL E + WYC +C++H A K ++LWT PD+LI+HLKRF F + + R K++ V+FP+EGLDL+ Y+ P+ + PP+Y L+GVSEHTG + SGHYTA RN DG+WY ND+HV T +S ++ AYVLFY+R
Sbjct: 187 KQKSAIQLQDCLEKFMEGEQLDERNAWYCPKCRQHVCALKMIALWTIPDILIIHLKRFTF-DTCMASGHMLRSKVDDKVEFPIEGLDLTKYIL---GPVDPDA--PPVYRLFGVSEHTGPTANSGHYTATVRNSIDGQWYRCNDSHVGRTSGEAS--ITGGAYVLFYQR 347 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5777.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5777.1.2 >prot_P-wetherbeei_contig5777.1.2 ID=prot_P-wetherbeei_contig5777.1.2|Name=mRNA_P-wetherbeei_contig5777.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=189bp MMEHVSVAEAAKPASPISLQDCLDKFMEREQLTEMDPWYCSRCKEHRQAYback to top mRNA from alignment at P-wetherbeei_contig5777:5..3705- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5777.1.2 ID=mRNA_P-wetherbeei_contig5777.1.2|Name=mRNA_P-wetherbeei_contig5777.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3701bp|location=Sequence derived from alignment at P-wetherbeei_contig5777:5..3705- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5777:5..3705- >mRNA_P-wetherbeei_contig5777.1.2 ID=mRNA_P-wetherbeei_contig5777.1.2|Name=mRNA_P-wetherbeei_contig5777.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=567bp|location=Sequence derived from alignment at P-wetherbeei_contig5777:5..3705- (Phaeothamnion wetherbeei SAG_119_79)back to top |