mRNA_P-wetherbeei_contig57760.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57760.1.1
Unique NamemRNA_P-wetherbeei_contig57760.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: UPI001C3DB9E5 (amidohydrolase family protein n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3DB9E5)

HSP 1 Score: 166 bits (421), Expect = 3.250e-49
Identity = 82/111 (73.87%), Postives = 91/111 (81.98%), Query Frame = 1
Query:    7 LADLPRAGAVDAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            L DLP AG VDAHVH+GRD DGH LDAD+L+ADLDRWGLA AVCF ANEPG+DG F  ANAAV  AARR P RI+PFCR+ P+ PGAH  +AAAA+ GARGLKLHPVAQR 
Sbjct:   32 LGDLPYAGGVDAHVHIGRDRDGHALDADALVADLDRWGLAAAVCFPANEPGDDGAFTAANAAVAAAARRHPGRIIPFCRIDPSRPGAHAAMAAAAADGARGLKLHPVAQRL 142          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: UPI001C3D0E3D (amidohydrolase family protein n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3D0E3D)

HSP 1 Score: 161 bits (408), Expect = 2.960e-47
Identity = 84/113 (74.34%), Postives = 90/113 (79.65%), Query Frame = 1
Query:    1 DDLADLPRAGAVDAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            DDL  L RAGAVDAHVHLGRD DGH LD   LLADLDRWGL  AVCF A+EPG +G FA AN AV+ AARRAP RI+PFCRV P  P A +ELA AA+AGARGLKLHPVAQRF
Sbjct:   30 DDLGGLSRAGAVDAHVHLGRDRDGHRLDDAGLLADLDRWGLRAAVCFPADEPGVEGDFAAANDAVLAAARRAPGRIIPFCRVDPGHPRARDELARAAAAGARGLKLHPVAQRF 142          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: A0A7V9I568_9ACTN (Amidohydrolase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9I568_9ACTN)

HSP 1 Score: 80.5 bits (197), Expect = 1.720e-15
Identity = 45/105 (42.86%), Postives = 59/105 (56.19%), Query Frame = 1
Query:   25 AGAVDAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            A  VDAH+HLG D DG     + L   +DR+G++GA  F  +EP  +  F   N   +  A R+  R++PF R+  TA G  EE       GARG+KLHP AQRF
Sbjct:   27 ADVVDAHLHLGHDIDGFSGQYEELEQIMDRYGISGAFMFCLDEPDREPAFRAPNDRTLRDAERSNGRLIPFVRLDLTAEGPIEEAVRCLDRGARGIKLHPRAQRF 131          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: A0A7W0UDI3_9ACTN (Amidohydrolase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7W0UDI3_9ACTN)

HSP 1 Score: 77.0 bits (188), Expect = 3.050e-14
Identity = 49/111 (44.14%), Postives = 63/111 (56.76%), Query Frame = 1
Query:   10 ADLPRAGAV-DAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            A+LP+   + DAHVHLG D DG   D D L+A  +R G++GA  F  +EP     F+ AN   +  A R+  R VPF R+  T     EE      AGARG+KLHP AQ+F
Sbjct:   21 AELPQGAEIFDAHVHLGNDIDGMAGDFDELVAIQERHGISGAFMFCLDEPDRHPSFSAANDRTLVQAERSQGRFVPFVRLDLTERPI-EEARRCLDAGARGIKLHPRAQKF 130          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: A0A7V9DGU3_9ACTN (Amidohydrolase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9DGU3_9ACTN)

HSP 1 Score: 75.9 bits (185), Expect = 7.930e-14
Identity = 48/111 (43.24%), Postives = 62/111 (55.86%), Query Frame = 1
Query:   10 ADLPRAGAV-DAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            A+LP+   + DAHVHLG D DG   D D L+   +R+G++GA  F  +EP     F  AN   +  A R+  R VPF R+   A    EE      AGARG+KLHP AQ+F
Sbjct:   21 AELPQGAEIFDAHVHLGTDVDGMVGDFDELIEGQERFGISGAFVFCLDEPDRHPGFRAANDRTLRHAARSGGRFVPFVRLD-LAEEPLEEAVRCLDAGARGIKLHPRAQKF 130          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: A0A7V9FQ79_9ACTN (Amidohydrolase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9FQ79_9ACTN)

HSP 1 Score: 75.9 bits (185), Expect = 7.930e-14
Identity = 48/111 (43.24%), Postives = 64/111 (57.66%), Query Frame = 1
Query:   10 ADLPRAGAV-DAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            A+LP    + DAHVHLG D DG   D + L+A  +R+G++GA  F  +EP     F+ AN   +  A R+  R+VPF R+   A    EE      AGARG+KLHP AQ+F
Sbjct:   21 AELPEGAEIFDAHVHLGTDIDGMVGDFEELVAVEERYGISGAFMFCLDEPDRHPAFSAANDRTLAYAERSNGRLVPFVRLD-LAEQPIEEARRCLDAGARGIKLHPRAQKF 130          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: A0A7V9G087_9ACTN (Amidohydrolase family protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9G087_9ACTN)

HSP 1 Score: 72.8 bits (177), Expect = 1.000e-12
Identity = 44/111 (39.64%), Postives = 60/111 (54.05%), Query Frame = 1
Query:   10 ADLPRAGAV-DAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            A++P   A+ D H HLG D DG     + L A   R+G++ A  F  +EP  +  F  AN   +  A R+  R++PF R+  TAP   +E       GARG+KLHP AQRF
Sbjct:   21 AEIPPGAAIFDVHTHLGNDIDGMAGSFEELEAIQARYGISRAFVFCLDEPDREPAFRAANDRTLAFAERSEGRLIPFVRLDLTAPEPIQEAERCLDRGARGIKLHPRAQRF 131          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: A0A537TR95_9ACTN (Amidohydro-rel domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537TR95_9ACTN)

HSP 1 Score: 72.4 bits (176), Expect = 1.420e-12
Identity = 48/109 (44.04%), Postives = 58/109 (53.21%), Query Frame = 1
Query:   16 LPRAGAV-DAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            +P A  + DAHVH+GRD DG     D LLA L R G  GA  F  +EP     F  AN   + AA R+   ++PF R+  T     EE       GARG+KLHP AQRF
Sbjct:   23 IPEAAELFDAHVHVGRDIDGFAAPYDDLLAFLRRDGARGAFAFCMDEPDRRPAFRAANDRTLAAAERSGGMLIPFVRLDLTEEPL-EEAVRCLDRGARGIKLHPRAQRF 130          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: A0A538BW07_9ACTN (Amidohydro-rel domain-containing protein (Fragment) n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538BW07_9ACTN)

HSP 1 Score: 69.7 bits (169), Expect = 2.810e-12
Identity = 47/110 (42.73%), Postives = 59/110 (53.64%), Query Frame = 1
Query:   13 DLPR-AGAVDAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            DLP  A   DAHVHLG D DG   D D L     R+G++ A  F  +EP     F+ AN   +E A R+  R++PF R+  +     EE       GARG+KLHP AQRF
Sbjct:   22 DLPDDADIFDAHVHLGTDIDGFSGDYDELERVQKRFGVSRAFMFCLDEPDRHPAFSAANDRTLEYAERSGGRLIPFVRLDLSEKPV-EEATRCLDKGARGIKLHPRAQRF 130          
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Match: A0A537Z356_9ACTN (Amidohydro-rel domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537Z356_9ACTN)

HSP 1 Score: 71.2 bits (173), Expect = 3.550e-12
Identity = 46/110 (41.82%), Postives = 60/110 (54.55%), Query Frame = 1
Query:   13 DLPRAGAV-DAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAANEPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAGARGLKLHPVAQRF 339
            DLP+   + DAHVHLG D DG   D D L     R+G++ A  F  +EP     F+ AN   +E A R+  R++PF R+  +     EE       GARG+KLHP AQRF
Sbjct:   22 DLPQGADIFDAHVHLGTDIDGFSGDYDELQRVQKRFGVSRAFMFCLDEPDRHPAFSAANDRTLEYAERSGGRLIPFVRLDLSEKPV-EEATRCLDKGARGIKLHPRAQRF 130          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57760.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001C3DB9E53.250e-4973.87amidohydrolase family protein n=1 Tax=Miltoncostae... [more]
UPI001C3D0E3D2.960e-4774.34amidohydrolase family protein n=1 Tax=Miltoncostae... [more]
A0A7V9I568_9ACTN1.720e-1542.86Amidohydrolase family protein n=1 Tax=Actinomyceti... [more]
A0A7W0UDI3_9ACTN3.050e-1444.14Amidohydrolase family protein n=1 Tax=Actinomyceti... [more]
A0A7V9DGU3_9ACTN7.930e-1443.24Amidohydrolase family protein n=1 Tax=Actinomyceti... [more]
A0A7V9FQ79_9ACTN7.930e-1443.24Amidohydrolase family protein n=1 Tax=Actinomyceti... [more]
A0A7V9G087_9ACTN1.000e-1239.64Amidohydrolase family protein n=1 Tax=Actinomyceti... [more]
A0A537TR95_9ACTN1.420e-1244.04Amidohydro-rel domain-containing protein n=1 Tax=A... [more]
A0A538BW07_9ACTN2.810e-1242.73Amidohydro-rel domain-containing protein (Fragment... [more]
A0A537Z356_9ACTN3.550e-1241.82Amidohydro-rel domain-containing protein n=1 Tax=A... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57760contigP-wetherbeei_contig57760:21..359 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1122182.KB903833_gene5326
PFAMsAmidohydro_2
Model size339
Max annot lvl201174|Actinobacteria
KEGG koko:K07045
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.83e-15
EggNOG OGsCOG2159@1|root,COG2159@2|Bacteria,2GMQY@201174|Actinobacteria,4D8Y3@85008|Micromonosporales
DescriptionAmidohydrolase
Cds size339
COG categoryS
BRITEko00000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186856.216604-CDS-P-wetherbeei_contig57760:20..3591683186856.216604-CDS-P-wetherbeei_contig57760:20..359Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57760 21..359 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57760.1.1prot_P-wetherbeei_contig57760.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57760 21..359 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57760.1.1

>prot_P-wetherbeei_contig57760.1.1 ID=prot_P-wetherbeei_contig57760.1.1|Name=mRNA_P-wetherbeei_contig57760.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=113bp
DDLADLPRAGAVDAHVHLGRDADGHHLDADSLLADLDRWGLAGAVCFAAN
EPGEDGQFAHANAAVIEAARRAPQRIVPFCRVHPTAPGAHEELAAAASAG
ARGLKLHPVAQRF
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mRNA from alignment at P-wetherbeei_contig57760:21..359-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57760.1.1 ID=mRNA_P-wetherbeei_contig57760.1.1|Name=mRNA_P-wetherbeei_contig57760.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig57760:21..359- (Phaeothamnion wetherbeei SAG_119_79)
GACGACCTCGCCGACCTGCCGCGCGCCGGCGCCGTCGACGCGCACGTGCA CCTCGGCCGCGACGCCGACGGCCACCATCTGGACGCCGACTCCCTGCTGG CCGATCTCGATCGCTGGGGCCTGGCGGGGGCGGTGTGCTTCGCGGCCAAC GAGCCGGGAGAGGACGGGCAGTTCGCCCACGCGAACGCGGCCGTCATCGA GGCCGCGCGACGTGCGCCCCAGCGCATCGTCCCCTTCTGCCGGGTCCATC CCACCGCCCCCGGCGCGCACGAGGAGCTGGCCGCGGCCGCGAGCGCCGGC GCCCGCGGCCTGAAGCTGCACCCGGTGGCCCAGCGCTTT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57760:21..359-

>mRNA_P-wetherbeei_contig57760.1.1 ID=mRNA_P-wetherbeei_contig57760.1.1|Name=mRNA_P-wetherbeei_contig57760.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=339bp|location=Sequence derived from alignment at P-wetherbeei_contig57760:21..359- (Phaeothamnion wetherbeei SAG_119_79)
GACGACCTCGCCGACCTGCCGCGCGCCGGCGCCGTCGACGCGCACGTGCA
CCTCGGCCGCGACGCCGACGGCCACCATCTGGACGCCGACTCCCTGCTGG
CCGATCTCGATCGCTGGGGCCTGGCGGGGGCGGTGTGCTTCGCGGCCAAC
GAGCCGGGAGAGGACGGGCAGTTCGCCCACGCGAACGCGGCCGTCATCGA
GGCCGCGCGACGTGCGCCCCAGCGCATCGTCCCCTTCTGCCGGGTCCATC
CCACCGCCCCCGGCGCGCACGAGGAGCTGGCCGCGGCCGCGAGCGCCGGC
GCCCGCGGCCTGAAGCTGCACCCGGTGGCCCAGCGCTTT
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