mRNA_P-wetherbeei_contig57719.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57719.1.1
Unique NamemRNA_P-wetherbeei_contig57719.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A1F3ZXD4_9PROT (Peptidase M48 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_64_12 TaxID=1797487 RepID=A0A1F3ZXD4_9PROT)

HSP 1 Score: 261 bits (667), Expect = 1.130e-85
Identity = 128/168 (76.19%), Postives = 145/168 (86.31%), Query Frame = 1
Query:    1 AQKGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKM 504
            A+KGQL+RD  Q ARVRA+A RLI  T  FR DAPGW+WE +VISS +VNAWCMPGGKIAVYTG++D L++TDDELAAVMGHEI+HALREHGRERASQA+ Q L I ++GAAAG+S    DLS+ VLDLTFNLPNSR DE EADRIGVELAAR+GYDPRAAISLWQKM
Sbjct:   57 AKKGQLNRDAAQLARVRAIAGRLISSTGTFRPDAPGWRWEENVISSKDVNAWCMPGGKIAVYTGLIDRLKVTDDELAAVMGHEIAHALREHGRERASQALTQSLAIGIIGAAAGISRDAMDLSQMVLDLTFNLPNSRTDEVEADRIGVELAARSGYDPRAAISLWQKM 224          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A1F6VCT3_9PROT (Peptidase M48 n=1 Tax=Candidatus Muproteobacteria bacterium RBG_16_60_9 TaxID=1817755 RepID=A0A1F6VCT3_9PROT)

HSP 1 Score: 250 bits (638), Expect = 3.830e-81
Identity = 120/166 (72.29%), Postives = 141/166 (84.94%), Query Frame = 1
Query:    7 KGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKM 504
            KGQL+ DP Q  RVR +A RLIP T  FR DAP W WE++V+ SN+VNAWCMPGGKIAVYTG++  L+ TDDELAAVMGHEI+HALREH RE+ASQA AQGL++ ++GAAAGLS T Q LS+  LD+TFNLP+SR DETEADRIGVELAAR+GYDPRAA+SLW+KM
Sbjct:   69 KGQLNPDPTQTERVRRIANRLIPNTVTFRPDAPKWSWEINVLGSNDVNAWCMPGGKIAVYTGLIAKLKATDDELAAVMGHEIAHALREHSREQASQAAAQGLILGILGAAAGLSNTGQQLSQLALDVTFNLPHSRTDETEADRIGVELAARSGYDPRAAVSLWEKM 234          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A536SNX1_9PROT (M48 family metallopeptidase n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SNX1_9PROT)

HSP 1 Score: 249 bits (635), Expect = 9.610e-81
Identity = 124/167 (74.25%), Postives = 140/167 (83.83%), Query Frame = 1
Query:    7 KGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKMG 507
            KGQL+RD  Q  RVR +A RLIP T+AFRADAPGW WEV+VISS+EVNAWCMPGGKIAVYTG+L  L  TDDELAAVMGHEISHALREH RE+AS   AQGLLIN+VGAA G  G  Q+L   VLD+ FNLP+SR DETEADR+GVE+AARAG+DP A++SLWQKMG
Sbjct:   64 KGQLNRDSAQVERVRRIANRLIPNTSAFRADAPGWAWEVNVISSDEVNAWCMPGGKIAVYTGLLAKLDPTDDELAAVMGHEISHALREHSREQASHRAAQGLLINLVGAATGYGGLVQNLGPAVLDVMFNLPHSRTDETEADRMGVEVAARAGFDPHASVSLWQKMG 230          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A7C2YZT7_9PROT (M48 family peptidase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C2YZT7_9PROT)

HSP 1 Score: 245 bits (625), Expect = 3.720e-79
Identity = 119/168 (70.83%), Postives = 140/168 (83.33%), Query Frame = 1
Query:    1 AQKGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKM 504
            A+KG L+++P    RVRA+  RLIP T AFR DAPGW+WEV+V+SS EVNAWCMPGGKIAVYTG++D L+ TDDELAA++GHEI+HALREHGRERASQ M QG+ + V+GAA GL G  QDL+  V D+TF LP SR+ E EADRIGVELAARAGYDPRAAI+LWQKM
Sbjct:   67 ARKGALNQNPAHVQRVRAITQRLIPATGAFRQDAPGWKWEVNVVSSPEVNAWCMPGGKIAVYTGLIDRLKPTDDELAAIIGHEIAHALREHGRERASQQMGQGIAVGVIGAALGLGGLGQDLAGLVADVTFGLPYSREFEREADRIGVELAARAGYDPRAAITLWQKM 234          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A1F4AZR6_9PROT (Peptidase M48 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AZR6_9PROT)

HSP 1 Score: 243 bits (620), Expect = 1.650e-78
Identity = 120/168 (71.43%), Postives = 140/168 (83.33%), Query Frame = 1
Query:    1 AQKGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKM 504
            A+KGQL+ DP QAARVR VA RLI QT AFR+DAPGW+WEV++I S ++NAWCMPGGKI VY+ ++D L L DDELAAV+GHEI+HALREHGRER S+A AQG+   VVG A G+S    DLS+ VLD+T+NLPNSRQDE EADRIGVELAARAG+DP AAI LWQKM
Sbjct:   58 ARKGQLNPDPAQAARVRGVAQRLIAQTGAFRSDAPGWKWEVNLIGSRDLNAWCMPGGKIGVYSALIDELHLGDDELAAVIGHEIAHALREHGRERVSKAYAQGIGFAVVGTALGISSAAIDLSRVVLDVTYNLPNSRQDEQEADRIGVELAARAGFDPYAAIGLWQKM 225          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A1F3ZCL6_9PROT (Peptidase M48 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZCL6_9PROT)

HSP 1 Score: 242 bits (618), Expect = 4.570e-78
Identity = 117/166 (70.48%), Postives = 139/166 (83.73%), Query Frame = 1
Query:    7 KGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKM 504
            K QL+RD  Q ARV+ VA RLIP T AFR DAPGW+WEV+VI+S EVNAWCMPGGKIA YTG+++ L+++DDE+AAVMGHEI+HALREHGRERASQA+ Q  ++N+  A  G+ G   DLS  +LD+TFNLPNSRQDE EADRIGVELAARAG+DP AA+SLWQKM
Sbjct:   71 KNQLNRDAAQLARVKRVAERLIPATTAFRNDAPGWKWEVNVITSAEVNAWCMPGGKIAFYTGLIEKLQVSDDEMAAVMGHEIAHALREHGRERASQAVLQSAVLNIGAALLGVGGAAVDLSSTILDVTFNLPNSRQDEIEADRIGVELAARAGFDPHAAVSLWQKM 236          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A1F4CSQ5_9PROT (Peptidase M48 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_19 TaxID=1797504 RepID=A0A1F4CSQ5_9PROT)

HSP 1 Score: 242 bits (617), Expect = 4.720e-78
Identity = 118/166 (71.08%), Postives = 139/166 (83.73%), Query Frame = 1
Query:    7 KGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKM 504
            KG L+RDP Q ARVRA+A RLIPQTA+FR DAP W+WEV+VIS  +VNAW MPGGK+AVY+G++  L  +DDELAAVMGHEI+HALREHGRERASQAMAQ + + V+GA  G+SG   DLS+  LD+T NLPNSR  ETE+DRIGVELAA AGYDPRAA+SLW+KM
Sbjct:   62 KGVLNRDPAQVARVRAIAKRLIPQTASFRPDAPAWKWEVNVISVKDVNAWAMPGGKMAVYSGLIQQLNASDDELAAVMGHEIAHALREHGRERASQAMAQSMGLAVLGAVTGISGRALDLSQLALDVTLNLPNSRTHETESDRIGVELAASAGYDPRAAVSLWEKM 227          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A1F4ADL4_9PROT (Peptidase M48 n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F4ADL4_9PROT)

HSP 1 Score: 239 bits (609), Expect = 8.770e-77
Identity = 118/168 (70.24%), Postives = 138/168 (82.14%), Query Frame = 1
Query:    1 AQKGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKM 504
            A+KG L+R+ GQ ARVRA+A RLIP T AFR+DAPGW+WEV VISSNE+NAWCMPGGK+AVYTG++D LRL+DDELAAVMGHEI+HALREHGRERASQ  AQG ++ +  A  GL      L+  V D+T  +P SR+ E EADRIGVELAARAGYDPRAA+SLWQKM
Sbjct:   60 ARKGTLNRNAGQVARVRAIANRLIPATRAFRSDAPGWRWEVSVISSNELNAWCMPGGKVAVYTGLMDRLRLSDDELAAVMGHEIAHALREHGRERASQQAAQGAVLGIGAALLGLGDAGASLAGIVADVTIGMPYSREFEREADRIGVELAARAGYDPRAAVSLWQKM 227          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A0S8B7F1_9PROT (Peptidase M48 n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B7F1_9PROT)

HSP 1 Score: 238 bits (606), Expect = 2.420e-76
Identity = 118/169 (69.82%), Postives = 141/169 (83.43%), Query Frame = 1
Query:    1 AQKGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKMG 507
            A+ G+L+RDP Q ARVRAVAARLI  + AFRADA GW WE +V+SS EVNAWCMPGGK+AVYTG+++ L+ TD ELAA+MGHEI+HALREHGRERASQAMA  + ++++GAA G+S    DLS  ++D+T   PNSR  ETEADR+GVELAARAGYDPRAAISLWQKMG
Sbjct:   61 ARAGRLNRDPRQVARVRAVAARLISASIAFRADARGWAWESNVLSSKEVNAWCMPGGKMAVYTGLIERLKPTDAELAAIMGHEIAHALREHGRERASQAMAASIGLSILGAATGMSSGAMDLSAIIVDVTVMKPNSRAFETEADRVGVELAARAGYDPRAAISLWQKMG 229          
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Match: A0A6L5JUI2_RHOTE (M48 family metalloprotease n=3 Tax=Rhodocyclus TaxID=1064 RepID=A0A6L5JUI2_RHOTE)

HSP 1 Score: 237 bits (605), Expect = 7.300e-76
Identity = 120/166 (72.29%), Postives = 137/166 (82.53%), Query Frame = 1
Query:    7 KGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVNAWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAMAQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVELAARAGYDPRAAISLWQKM 504
            KGQL+ D G  ARVRA+A RLIP TAAFRADAP W+WEV+VI S E+NAWCMPGGKIAVY+G++D LR TD ELAAVMGHEI+HALREHGRERASQA A  L +  +GAAAGLS    DL+  + DLT   PNSRQ+E EADRIGVELAARAGYDP+AA+SLW+KM
Sbjct:   76 KGQLNHDAGDTARVRAIANRLIPATAAFRADAPAWRWEVNVIDSKELNAWCMPGGKIAVYSGLIDTLRPTDAELAAVMGHEIAHALREHGRERASQAQAANLGLTFLGAAAGLSRNQVDLAGQITDLTVLHPNSRQNEAEADRIGVELAARAGYDPQAAVSLWEKM 241          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57719.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1F3ZXD4_9PROT1.130e-8576.19Peptidase M48 n=1 Tax=Betaproteobacteria bacterium... [more]
A0A1F6VCT3_9PROT3.830e-8172.29Peptidase M48 n=1 Tax=Candidatus Muproteobacteria ... [more]
A0A536SNX1_9PROT9.610e-8174.25M48 family metallopeptidase n=2 Tax=Betaproteobact... [more]
A0A7C2YZT7_9PROT3.720e-7970.83M48 family peptidase n=1 Tax=Betaproteobacteria ba... [more]
A0A1F4AZR6_9PROT1.650e-7871.43Peptidase M48 n=1 Tax=Betaproteobacteria bacterium... [more]
A0A1F3ZCL6_9PROT4.570e-7870.48Peptidase M48 n=1 Tax=Betaproteobacteria bacterium... [more]
A0A1F4CSQ5_9PROT4.720e-7871.08Peptidase M48 n=1 Tax=Betaproteobacteria bacterium... [more]
A0A1F4ADL4_9PROT8.770e-7770.24Peptidase M48 n=1 Tax=Betaproteobacteria bacterium... [more]
A0A0S8B7F1_9PROT2.420e-7669.82Peptidase M48 n=1 Tax=Betaproteobacteria bacterium... [more]
A0A6L5JUI2_RHOTE7.300e-7672.29M48 family metalloprotease n=3 Tax=Rhodocyclus Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57719contigP-wetherbeei_contig57719:1..507 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog305700.B447_01246
PFAMsPeptidase_M48
Model size507
Max annot lvl206389|Rhodocyclales
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.22e-73
EggNOG OGsCOG0501@1|root,COG0501@2|Bacteria,1MUNA@1224|Proteobacteria,2VHTB@28216|Betaproteobacteria,2KVMZ@206389|Rhodocyclales
DescriptionPeptidase M48
Cds size507
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186855.6598508-CDS-P-wetherbeei_contig57719:0..5071683186855.6598508-CDS-P-wetherbeei_contig57719:0..507Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57719 1..507 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57719.1.1prot_P-wetherbeei_contig57719.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57719 1..507 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57719.1.1

>prot_P-wetherbeei_contig57719.1.1 ID=prot_P-wetherbeei_contig57719.1.1|Name=mRNA_P-wetherbeei_contig57719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=169bp
AQKGQLDRDPGQAARVRAVAARLIPQTAAFRADAPGWQWEVHVISSNEVN
AWCMPGGKIAVYTGILDGLRLTDDELAAVMGHEISHALREHGRERASQAM
AQGLLINVVGAAAGLSGTTQDLSKFVLDLTFNLPNSRQDETEADRIGVEL
AARAGYDPRAAISLWQKMG
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mRNA from alignment at P-wetherbeei_contig57719:1..507+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57719.1.1 ID=mRNA_P-wetherbeei_contig57719.1.1|Name=mRNA_P-wetherbeei_contig57719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57719:1..507+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCAGAAAGGTCAGCTCGACCGCGACCCCGGTCAGGCCGCACGCGTGCG CGCCGTGGCCGCGCGGCTCATCCCGCAGACTGCCGCGTTCCGAGCCGACG CTCCGGGCTGGCAATGGGAGGTGCACGTGATTTCCTCGAACGAGGTCAAC GCCTGGTGCATGCCGGGCGGCAAGATCGCGGTGTACACGGGGATCCTTGA CGGGTTGCGGCTCACGGACGACGAACTCGCCGCGGTGATGGGCCACGAGA TCTCTCACGCCCTGCGCGAACACGGGCGGGAGCGCGCGTCCCAGGCCATG GCCCAGGGCCTGCTCATCAACGTCGTCGGCGCGGCGGCGGGCCTGTCCGG CACCACGCAGGACCTGTCGAAGTTCGTGCTGGACCTGACGTTCAATCTCC CGAACTCGCGCCAGGACGAGACCGAGGCCGACCGCATCGGCGTGGAACTG GCGGCGAGGGCTGGCTACGACCCGCGCGCCGCGATCTCCCTGTGGCAGAA GATGGGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57719:1..507+

>mRNA_P-wetherbeei_contig57719.1.1 ID=mRNA_P-wetherbeei_contig57719.1.1|Name=mRNA_P-wetherbeei_contig57719.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=507bp|location=Sequence derived from alignment at P-wetherbeei_contig57719:1..507+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCAGAAAGGTCAGCTCGACCGCGACCCCGGTCAGGCCGCACGCGTGCG
CGCCGTGGCCGCGCGGCTCATCCCGCAGACTGCCGCGTTCCGAGCCGACG
CTCCGGGCTGGCAATGGGAGGTGCACGTGATTTCCTCGAACGAGGTCAAC
GCCTGGTGCATGCCGGGCGGCAAGATCGCGGTGTACACGGGGATCCTTGA
CGGGTTGCGGCTCACGGACGACGAACTCGCCGCGGTGATGGGCCACGAGA
TCTCTCACGCCCTGCGCGAACACGGGCGGGAGCGCGCGTCCCAGGCCATG
GCCCAGGGCCTGCTCATCAACGTCGTCGGCGCGGCGGCGGGCCTGTCCGG
CACCACGCAGGACCTGTCGAAGTTCGTGCTGGACCTGACGTTCAATCTCC
CGAACTCGCGCCAGGACGAGACCGAGGCCGACCGCATCGGCGTGGAACTG
GCGGCGAGGGCTGGCTACGACCCGCGCGCCGCGATCTCCCTGTGGCAGAA
GATGGGG
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