mRNA_P-wetherbeei_contig57661.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57661.1.1
Unique NamemRNA_P-wetherbeei_contig57661.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A7K0QLH3_9ACTN (GST N-terminal domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7K0QLH3_9ACTN)

HSP 1 Score: 90.1 bits (222), Expect = 1.220e-21
Identity = 47/92 (51.09%), Postives = 60/92 (65.22%), Query Frame = 1
Query:    7 MATLYVCGQGTKLASV-HPCGKAARALDEAGVTYELATAEGYRRVPWMRAK--RAAIRELSGQIGVPVLVTDEGVVINGSAQIIEWARERTA 273
            M TLY CGQ    A++ HPCG+AARAL  AG  + +    GYR +PW R    RAA+RELSGQ  VP+LV D+G V++GS  I+ WA+   A
Sbjct:    1 MMTLYTCGQRESAAALGHPCGRAARALRAAGHEFSIEEVGGYRMLPWTRRGDVRAAVRELSGQDNVPILVLDDGTVVSGSGAIVSWAKGAAA 92          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A538M184_9ACTN (GST N-terminal domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538M184_9ACTN)

HSP 1 Score: 74.3 bits (181), Expect = 3.020e-15
Identity = 44/96 (45.83%), Postives = 54/96 (56.25%), Query Frame = 1
Query:   13 TLYVCGQGTKLASV-----HPCGKAARALDEAGVTYELATAEG----YRRVPWMRAKRAAIRELSGQIGVPVLVTDEGVVINGSAQIIEWARERTA 273
            TLY C  G  L  +     HPCG+AA+ALD+AG  YE    +G    +   P     RA + +LSGQ GVP+LV D G VI GS  I+EWAR   A
Sbjct:    5 TLYTCTDGKSLGGLPAPIAHPCGRAAKALDDAGHAYEWKKVKGGTLKFWTWPSRGRDRAEVEKLSGQRGVPLLVLDSGEVIVGSGPIVEWARANPA 100          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A2W5Y4E6_9ACTN (GST N-terminal domain-containing protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A2W5Y4E6_9ACTN)

HSP 1 Score: 70.9 bits (172), Expect = 4.490e-14
Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 1
Query:   55 HPCGKAARALDEAGVTYELATAEGYRRVPWMR-AKRAAIRELSGQIGVPVLVTDEGVVINGSAQIIEWAR 261
            HPCG AA+ALD+AG  YE+    G++++P+ R  KR  I +L+GQ  VPVLV D+G  I G+A I  WA+
Sbjct:   20 HPCGVAAKALDDAGQPYEIKVVGGFKKLPFSRRGKRQEIEQLTGQQDVPVLVLDDGTAIAGTAAIEAWAK 89          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A537XDT1_9ACTN (GST N-terminal domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537XDT1_9ACTN)

HSP 1 Score: 71.6 bits (174), Expect = 6.220e-14
Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query:   16 LYVCGQGTKLASV-----HPCGKAARALDEAGVTYELATAEGYRRVPWM---RAK-RAAIRELSGQIGVPVLVTDEGVVINGSAQIIEWARERTAV 276
            LY C  G  L  +     HPCG+AA+ALD++G  Y+    +G     W    RA+ RA I +LSGQ  VP+LV D+G V+ GS  I+ WA+E+T V
Sbjct:   32 LYTCTVGKALGDLPAPIAHPCGRAAKALDDSGHAYDWRKVKGGSLKFWTWPSRARDRAVIEQLSGQRAVPILVLDDGEVVVGSGAIVHWAQEKTPV 127          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: UPI00200F5A24 (glutathione S-transferase N-terminal domain-containing protein n=1 Tax=Conexibacter sp. S30A1 TaxID=2937800 RepID=UPI00200F5A24)

HSP 1 Score: 68.2 bits (165), Expect = 5.710e-13
Identity = 41/91 (45.05%), Postives = 52/91 (57.14%), Query Frame = 1
Query:   16 LYVCGQGTKLAS-VHPCGKAARALDEAGVTYELATAEGYRRVPWMRAKR----AAIRELSGQIGVPVLVTDEGVVINGSAQIIEWARERTA 273
            LYVC  GT   S +HPC KAA+ALD AG  YE    +  R + W    R    A I+ LSGQ  VP+LV D+  V+ GS +I +WA+   A
Sbjct:    3 LYVCPAGTSGPSALHPCTKAAKALDAAGHKYETRRVKTNRGMFWTWGSRSRDRAEIKRLSGQESVPILVLDDETVVTGSGEIAKWAQAHPA 93          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A7W1M181_9ACTN (Glutathione S-transferase N-terminal domain-containing protein n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7W1M181_9ACTN)

HSP 1 Score: 68.2 bits (165), Expect = 6.810e-13
Identity = 39/90 (43.33%), Postives = 53/90 (58.89%), Query Frame = 1
Query:   16 LYVCGQGTKLASV-----HPCGKAARALDEAGVTYELATAEGYRRVPWM---RAK-RAAIRELSGQIGVPVLVTDEGVVINGSAQIIEWA 258
            LY C  G     +     HPCG+AA+ALD+ G +YE+   +G     W    RA+ RA + +LSGQ  VP+LV D+G VI GS  I++WA
Sbjct:    3 LYSCEMGKSAGGLPAPIAHPCGRAAKALDDRGHSYEMKQVKGGTLKLWTWPSRARDRAEVEQLSGQRSVPILVLDDGEVITGSGAIVDWA 92          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A7W0A7J7_9ACTN (Glutathione S-transferase domain-containing protein n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0A7J7_9ACTN)

HSP 1 Score: 58.9 bits (141), Expect = 2.140e-9
Identity = 37/88 (42.05%), Postives = 47/88 (53.41%), Query Frame = 1
Query:   16 LYVCGQG--TKLASVHPCGKAARALDEAGVTYELATAEGYRRVPWMRAKRAAIRELSGQIGVPVLVTDEGVVINGSAQIIEWARERTA 273
            LYVC     T     HPCG A  AL EAG   E+  A G   +P + + R  ++ L+G+  VPVLVTD+G +IN S  I  WA    A
Sbjct:    3 LYVCWGTFHTPRPGGHPCGNAYDALREAGHDPEVIKAYGLAPLPDLTSGRREVKRLTGKSWVPVLVTDDGEIINESKSIAAWAEANPA 90          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A7V9CBM1_9ACTN (Glutathione S-transferase domain-containing protein n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7V9CBM1_9ACTN)

HSP 1 Score: 58.5 bits (140), Expect = 4.410e-9
Identity = 36/77 (46.75%), Postives = 47/77 (61.04%), Query Frame = 1
Query:   55 HPCGKAARALDEAGVTYELATAEGYRRVPWMRAK---RAAIRELSG-QIGVPVLVTDEGVVINGSAQIIEWARERTA 273
            HPCG A RAL+EAG   EL  + G   +P +  K   R  ++EL+G  + VPVLVTD+G VI  S +II WA+   A
Sbjct:   19 HPCGNANRALEEAGYEPELIKSYGLAVLPEVFNKTKGRQQVKELTGGDVMVPVLVTDDGEVIQDSKKIIAWAKANPA 95          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A840ICN1_9ACTN (Glutaredoxin n=2 Tax=Conexibacter arvalis TaxID=912552 RepID=A0A840ICN1_9ACTN)

HSP 1 Score: 57.4 bits (137), Expect = 9.880e-9
Identity = 37/80 (46.25%), Postives = 45/80 (56.25%), Query Frame = 1
Query:   13 TLYVCGQGTKLASVHPCGKAARALDEAGVTYELATAEGYRRVPWMRAKRAAIRELSGQIGVPVLVTDEGVVINGSAQIIE 252
            TLY C   T L  + PCG+ ARAL  AGV YE        RVP+ RA R  I +L+GQ  VPVL  D G  +  S +I+E
Sbjct:   11 TLYRCPTPTDL--LCPCGRVARALRRAGVAYEEV------RVPYRRANREMIEQLTGQRRVPVLALDGGEAVCDSRRIVE 82          
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Match: A0A285FW44_9FIRM (Glutathione S-transferase, N-terminal domain n=2 Tax=Orenia metallireducens TaxID=1413210 RepID=A0A285FW44_9FIRM)

HSP 1 Score: 56.6 bits (135), Expect = 1.260e-8
Identity = 32/69 (46.38%), Postives = 40/69 (57.97%), Query Frame = 1
Query:   61 CGKAARALDEAGVTYELATAEGYRRVPWMRAKRAAIRELSGQIGVPVLVTDEGVVINGSAQIIEWARER 267
            C K    LDE G+ YE         VP  R KR  I+ELSGQI VPV+   +G V+N SA+IIE+  E+
Sbjct:   13 CAKVRNKLDEMGLEYEKI------EVPKDREKRTKIKELSGQIKVPVIEDSDGTVVNDSAKIIEYLEEK 75          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57661.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 24
Match NameE-valueIdentityDescription
A0A7K0QLH3_9ACTN1.220e-2151.09GST N-terminal domain-containing protein n=2 Tax=r... [more]
A0A538M184_9ACTN3.020e-1545.83GST N-terminal domain-containing protein n=1 Tax=A... [more]
A0A2W5Y4E6_9ACTN4.490e-1450.00GST N-terminal domain-containing protein n=1 Tax=S... [more]
A0A537XDT1_9ACTN6.220e-1443.75GST N-terminal domain-containing protein n=1 Tax=A... [more]
UPI00200F5A245.710e-1345.05glutathione S-transferase N-terminal domain-contai... [more]
A0A7W1M181_9ACTN6.810e-1343.33Glutathione S-transferase N-terminal domain-contai... [more]
A0A7W0A7J7_9ACTN2.140e-942.05Glutathione S-transferase domain-containing protei... [more]
A0A7V9CBM1_9ACTN4.410e-946.75Glutathione S-transferase domain-containing protei... [more]
A0A840ICN1_9ACTN9.880e-946.25Glutaredoxin n=2 Tax=Conexibacter arvalis TaxID=91... [more]
A0A285FW44_9FIRM1.260e-846.38Glutathione S-transferase, N-terminal domain n=2 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57661contigP-wetherbeei_contig57661:116..400 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1122939.ATUD01000022_gene3661
Model size285
Max annot lvl84995|Rubrobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.25e-08
EggNOG OGs2CFVN@1|root,2ZV9N@2|Bacteria,2GV11@201174|Actinobacteria,4CTQC@84995|Rubrobacteria
DescriptionGlutathione S-transferase, N-terminal domain
Cds size279
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186854.9283526-CDS-P-wetherbeei_contig57661:115..3941683186854.9283526-CDS-P-wetherbeei_contig57661:115..394Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57661 116..394 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186854.9413805-UTR-P-wetherbeei_contig57661:394..4001683186854.9413805-UTR-P-wetherbeei_contig57661:394..400Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig57661 395..400 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57661.1.1prot_P-wetherbeei_contig57661.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57661 116..394 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57661.1.1

>prot_P-wetherbeei_contig57661.1.1 ID=prot_P-wetherbeei_contig57661.1.1|Name=mRNA_P-wetherbeei_contig57661.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=93bp
MATLYVCGQGTKLASVHPCGKAARALDEAGVTYELATAEGYRRVPWMRAK
RAAIRELSGQIGVPVLVTDEGVVINGSAQIIEWARERTAVRG*
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mRNA from alignment at P-wetherbeei_contig57661:116..400-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57661.1.1 ID=mRNA_P-wetherbeei_contig57661.1.1|Name=mRNA_P-wetherbeei_contig57661.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig57661:116..400- (Phaeothamnion wetherbeei SAG_119_79)
GCGGCGATGGCGACCCTCTACGTCTGCGGCCAGGGCACCAAGCTCGCGTC GGTGCACCCGTGCGGCAAGGCGGCGCGGGCGCTCGACGAGGCCGGCGTGA CCTATGAGCTGGCCACGGCCGAGGGTTATCGGCGCGTCCCCTGGATGCGT GCCAAGCGCGCCGCCATCCGCGAGCTGTCGGGCCAGATCGGCGTGCCGGT GCTCGTGACCGACGAGGGCGTGGTCATCAACGGCAGCGCTCAGATCATCG AGTGGGCGCGCGAGCGCACGGCCGTCCGTGGCTAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57661:116..400-

>mRNA_P-wetherbeei_contig57661.1.1 ID=mRNA_P-wetherbeei_contig57661.1.1|Name=mRNA_P-wetherbeei_contig57661.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=279bp|location=Sequence derived from alignment at P-wetherbeei_contig57661:116..400- (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGACCCTCTACGTCTGCGGCCAGGGCACCAAGCTCGCGTCGGTGCA
CCCGTGCGGCAAGGCGGCGCGGGCGCTCGACGAGGCCGGCGTGACCTATG
AGCTGGCCACGGCCGAGGGTTATCGGCGCGTCCCCTGGATGCGTGCCAAG
CGCGCCGCCATCCGCGAGCTGTCGGGCCAGATCGGCGTGCCGGTGCTCGT
GACCGACGAGGGCGTGGTCATCAACGGCAGCGCTCAGATCATCGAGTGGG
CGCGCGAGCGCACGGCCGTCCGTGGCTAG
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