mRNA_P-wetherbeei_contig57616.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Match: A0A6J4UI36_9CHLR (Uncharacterized protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4UI36_9CHLR) HSP 1 Score: 56.2 bits (134), Expect = 7.670e-10 Identity = 25/34 (73.53%), Postives = 32/34 (94.12%), Query Frame = 1
Query: 1 MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDE 102
M++NTVRG+LGLVL AAATWLA +IVE++FGP+E
Sbjct: 1 MVRNTVRGILGLVLAAAATWLANFIVEKVFGPEE 34
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Match: D1C2J4_SPHTD (Uncharacterized protein n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) TaxID=479434 RepID=D1C2J4_SPHTD) HSP 1 Score: 53.1 bits (126), Expect = 1.370e-8 Identity = 23/36 (63.89%), Postives = 30/36 (83.33%), Query Frame = 1
Query: 1 MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDEER 108
M++N VRG+L LVL AAATWLA Y+ ++IFGP+EE
Sbjct: 1 MLRNVVRGILNLVLAAAATWLANYLTDRIFGPEEEE 36
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Match: A0A2H5YZ66_9BACT (Uncharacterized protein n=1 Tax=bacterium HR27 TaxID=2035422 RepID=A0A2H5YZ66_9BACT) HSP 1 Score: 52.8 bits (125), Expect = 1.910e-8 Identity = 24/34 (70.59%), Postives = 30/34 (88.24%), Query Frame = 1
Query: 1 MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDE 102
M++N VRG+L LVL AAATWLA YIVE++FGP+E
Sbjct: 1 MVRNLVRGILNLVLAAAATWLANYIVERLFGPEE 34
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Match: A0A6J4ULF7_9CHLR (Uncharacterized protein n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4ULF7_9CHLR) HSP 1 Score: 52.8 bits (125), Expect = 1.950e-8 Identity = 23/35 (65.71%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 1 MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDEE 105
M++NT RG+LGLVL A ATWLA +IVE+ FGP++E
Sbjct: 1 MLRNTTRGILGLVLAAGATWLANFIVEKAFGPEDE 35
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Match: A0A2H5YVK4_9BACT (Uncharacterized protein n=1 Tax=bacterium HR26 TaxID=2035421 RepID=A0A2H5YVK4_9BACT) HSP 1 Score: 51.2 bits (121), Expect = 7.540e-8 Identity = 24/34 (70.59%), Postives = 28/34 (82.35%), Query Frame = 1
Query: 1 MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDE 102
M +N VRG+L LVL A ATWLA YIVE+IFGP+E
Sbjct: 1 MARNLVRGILSLVLAAVATWLANYIVERIFGPEE 34
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Match: A0A2H5Z8M7_9BACT (Uncharacterized protein n=1 Tax=bacterium HR28 TaxID=2035423 RepID=A0A2H5Z8M7_9BACT) HSP 1 Score: 50.8 bits (120), Expect = 1.130e-7 Identity = 23/37 (62.16%), Postives = 30/37 (81.08%), Query Frame = 1
Query: 1 MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDEERA 111
M++N VRGVL LVL A ATWLA Y+VE++FGP+E +
Sbjct: 1 MVRNLVRGVLNLVLAALATWLANYLVERLFGPEERTS 37
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Match: B9KY06_THERP (Uncharacterized protein n=1 Tax=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) TaxID=309801 RepID=B9KY06_THERP) HSP 1 Score: 50.8 bits (120), Expect = 1.150e-7 Identity = 23/34 (67.65%), Postives = 29/34 (85.29%), Query Frame = 1
Query: 1 MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDE 102
M++N VRGVL LVL A ATWLA Y+VE++FGP+E
Sbjct: 1 MVRNLVRGVLNLVLAAVATWLANYLVERLFGPEE 34
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Match: I4EES0_9CHLR (Uncharacterized protein n=1 Tax=Nitrolancea hollandica Lb TaxID=1129897 RepID=I4EES0_9CHLR) HSP 1 Score: 50.1 bits (118), Expect = 2.280e-7 Identity = 22/36 (61.11%), Postives = 27/36 (75.00%), Query Frame = 1
Query: 1 MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDEER 108
M +N RG+L L+L A ATWLA YI E+IFGP+EE
Sbjct: 1 MARNVFRGILSLILAAVATWLANYITERIFGPEEEE 36 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57616.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 8
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57616.2.1 >prot_P-wetherbeei_contig57616.2.1 ID=prot_P-wetherbeei_contig57616.2.1|Name=mRNA_P-wetherbeei_contig57616.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=38bp MMKNTVRGVLGLVLTAAATWLAAYIVEQIFGPDEERA*back to top mRNA from alignment at P-wetherbeei_contig57616:313..426+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57616.2.1 ID=mRNA_P-wetherbeei_contig57616.2.1|Name=mRNA_P-wetherbeei_contig57616.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=114bp|location=Sequence derived from alignment at P-wetherbeei_contig57616:313..426+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57616:313..426+ >mRNA_P-wetherbeei_contig57616.2.1 ID=mRNA_P-wetherbeei_contig57616.2.1|Name=mRNA_P-wetherbeei_contig57616.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=114bp|location=Sequence derived from alignment at P-wetherbeei_contig57616:313..426+ (Phaeothamnion wetherbeei SAG_119_79)back to top |