prot_P-wetherbeei_contig57607.1.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig57607.1.1
Unique Nameprot_P-wetherbeei_contig57607.1.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length142
Homology
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: A0A3S0FT40_9BRAD (Hydrophobe/amphiphile efflux-1 family RND transporter (Fragment) n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A3S0FT40_9BRAD)

HSP 1 Score: 246 bits (628), Expect = 4.730e-82
Identity = 130/137 (94.89%), Postives = 134/137 (97.81%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKAPKAQAVA 137
            P L+L+GLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRA+KKAPK + VA
Sbjct:    1 PMLILSGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRASKKAPKVETVA 137          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: A0A023XND5_BRAJP (Efflux pump membrane transporter n=243 Tax=Proteobacteria TaxID=1224 RepID=A0A023XND5_BRAJP)

HSP 1 Score: 247 bits (630), Expect = 1.010e-73
Identity = 131/140 (93.57%), Postives = 135/140 (96.43%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKAPKAQAVAEVK 140
            P LVLN LKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLV+ATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWR++KK PK + VAEVK
Sbjct:  912 PMLVLNALKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVIATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRSSKKTPKPKPVAEVK 1051          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: A0A7C9VGQ3_9BRAD (Hydrophobe/amphiphile efflux-1 family RND transporter (Fragment) n=1 Tax=Candidatus Afipia apatlaquensis TaxID=2712852 RepID=A0A7C9VGQ3_9BRAD)

HSP 1 Score: 213 bits (543), Expect = 9.120e-69
Identity = 115/135 (85.19%), Postives = 121/135 (89.63%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKAPKAQA 135
            P  VL GL+I+NNLY QIGLILLIALSAKNAILIVEV LELH RD KP+LESA+EAARARFRPILMTSFAFILGV PLV ATGAGASARKSIGITVFSGMLASTCLAVLFVP FFVV+QR ENWRA +KA KA A
Sbjct:   21 PMAVLTGLRIENNLYTQIGLILLIALSAKNAILIVEVALELHVRDRKPLLESAVEAARARFRPILMTSFAFILGVAPLVFATGAGASARKSIGITVFSGMLASTCLAVLFVPTFFVVIQRLENWRAERKARKAAA 155          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: A0A401TWQ2_CHIPU (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A401TWQ2_CHIPU)

HSP 1 Score: 209 bits (533), Expect = 9.200e-67
Identity = 113/133 (84.96%), Postives = 120/133 (90.23%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKAPKA 133
            P LVL  L+I+NNLY QIG ILLIALSAKNAILIVEV LE H RDGKPVLESAI+AARARFRPILMTSFAFILGV+PLV+ATGAGA+ARKSIGITVFSGM+ASTCLAVLFVPAFFVVVQ FENWR AKK   A
Sbjct:   51 PMLVLTALRIENNLYTQIGTILLIALSAKNAILIVEVALEHHIRDGKPVLESAIDAARARFRPILMTSFAFILGVLPLVIATGAGANARKSIGITVFSGMIASTCLAVLFVPAFFVVVQNFENWRKAKKGKAA 183          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: H0U0D0_9BRAD (Efflux pump membrane transporter n=1 Tax=Bradyrhizobium sp. STM 3843 TaxID=551947 RepID=H0U0D0_9BRAD)

HSP 1 Score: 227 bits (578), Expect = 1.830e-66
Identity = 126/138 (91.30%), Postives = 128/138 (92.75%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAA-KKAPKAQAVA 137
            P  VL+ LKIDNNLY QIGLILLIALSAKNAILIVEVGLELHGRDGKP+LESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENW AA KK P A A A
Sbjct:  911 PMAVLSALKIDNNLYVQIGLILLIALSAKNAILIVEVGLELHGRDGKPLLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWLAARKKKPGAAAAA 1048          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: H0SMZ2_BRAS3 (Efflux pump membrane transporter n=5 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=H0SMZ2_BRAS3)

HSP 1 Score: 226 bits (577), Expect = 2.480e-66
Identity = 121/130 (93.08%), Postives = 125/130 (96.15%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKA 130
            P  VL  LKIDNNLY QIGLILLIALSAKNAILIVEVGLELHGRDGKP++ESAIEAAR+RFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAA+KA
Sbjct:  911 PMAVLTALKIDNNLYVQIGLILLIALSAKNAILIVEVGLELHGRDGKPLIESAIEAARSRFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAARKA 1040          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: A0A533ILZ7_9BRAD (Hydrophobe/amphiphile efflux-1 family RND transporter (Fragment) n=1 Tax=Bradyrhizobium icense TaxID=1274631 RepID=A0A533ILZ7_9BRAD)

HSP 1 Score: 208 bits (529), Expect = 5.660e-65
Identity = 109/132 (82.58%), Postives = 119/132 (90.15%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKAPK 132
            P  VL  L+I+NNLY QIG+ILLIALSAKNAILIVEV LELH RDGKP+LESA+ AARARFRPILMTSFAFILGV+PLVLATGAGA+ARKSIGITVFSGM+ASTCLAVLFVP FFVV+QRFENWRA +   K
Sbjct:  138 PMAVLTALRIENNLYTQIGIILLIALSAKNAILIVEVALELHVRDGKPLLESAVNAARARFRPILMTSFAFILGVLPLVLATGAGANARKSIGITVFSGMIASTCLAVLFVPTFFVVIQRFENWRAERSGKK 269          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: UPI0005539DF0 (efflux RND transporter permease subunit n=1 Tax=Bradyrhizobium sp. STM 3809 TaxID=551936 RepID=UPI0005539DF0)

HSP 1 Score: 200 bits (508), Expect = 4.950e-64
Identity = 107/111 (96.40%), Postives = 111/111 (100.00%), Query Frame = 0
Query:   20 LILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKA 130
            LILLIALSAKNAILIVEVGLELHGRDGKP++ESAIEAAR+RFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAA+KA
Sbjct:    1 LILLIALSAKNAILIVEVGLELHGRDGKPLIESAIEAARSRFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAARKA 111          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: M5F997_9HYPH (Transporter, hydrophobe/amphiphile efflux-1 (HAE1) family n=1 Tax=Mesorhizobium metallidurans STM 2683 TaxID=1297569 RepID=M5F997_9HYPH)

HSP 1 Score: 202 bits (515), Expect = 1.150e-63
Identity = 109/132 (82.58%), Postives = 119/132 (90.15%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKAPK 132
            P LVLNGL IDNNLY QIGLILLIALSAKNAILIVEV  EL    GKP+++SAIEAARARFRPILMTSFAFILGV PLV+ATGAGASARKSIGITVFSGM+ASTCLAVLFVP+FFV++QRFE WRAA+K  +
Sbjct:   84 PVLVLNGLGIDNNLYVQIGLILLIALSAKNAILIVEVARELRAA-GKPIIDSAIEAARARFRPILMTSFAFILGVAPLVVATGAGASARKSIGITVFSGMIASTCLAVLFVPSFFVILQRFEEWRAARKTKR 214          
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Match: UPI00131BD7E6 (multidrug efflux RND transporter permease subunit n=1 Tax=Bradyrhizobium sp. S69 TaxID=1641856 RepID=UPI00131BD7E6)

HSP 1 Score: 216 bits (551), Expect = 9.800e-63
Identity = 114/135 (84.44%), Postives = 124/135 (91.85%), Query Frame = 0
Query:    1 PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVLESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGMLASTCLAVLFVPAFFVVVQRFENWRAAKKAPKAQA 135
            P LVL+ L+IDNNLY QIG+ILLIALSAKNAILIVEV LELHGR+GKP+LESA+EAARARFRPILMTSFAFILGVVPLVLATGAGA+ARKSIGITVFSGMLASTCLAVLFVP FFVV+QRFENW  A+K    +A
Sbjct:  911 PMLVLSALRIDNNLYTQIGIILLIALSAKNAILIVEVALELHGREGKPLLESAVEAARARFRPILMTSFAFILGVVPLVLATGAGANARKSIGITVFSGMLASTCLAVLFVPTFFVVIQRFENWLTARKQAPVKA 1045          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57607.1.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3S0FT40_9BRAD4.730e-8294.89Hydrophobe/amphiphile efflux-1 family RND transpor... [more]
A0A023XND5_BRAJP1.010e-7393.57Efflux pump membrane transporter n=243 Tax=Proteob... [more]
A0A7C9VGQ3_9BRAD9.120e-6985.19Hydrophobe/amphiphile efflux-1 family RND transpor... [more]
A0A401TWQ2_CHIPU9.200e-6784.96Uncharacterized protein n=2 Tax=cellular organisms... [more]
H0U0D0_9BRAD1.830e-6691.30Efflux pump membrane transporter n=1 Tax=Bradyrhiz... [more]
H0SMZ2_BRAS32.480e-6693.08Efflux pump membrane transporter n=5 Tax=unclassif... [more]
A0A533ILZ7_9BRAD5.660e-6582.58Hydrophobe/amphiphile efflux-1 family RND transpor... [more]
UPI0005539DF04.950e-6496.40efflux RND transporter permease subunit n=1 Tax=Br... [more]
M5F997_9HYPH1.150e-6382.58Transporter, hydrophobe/amphiphile efflux-1 (HAE1)... [more]
UPI00131BD7E69.800e-6384.44multidrug efflux RND transporter permease subunit ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.1640.10Multidrug efflux transporter AcrB transmembrane domaincoord: 2..138
e-value: 5.7E-31
score: 109.4
NoneNo IPR availablePANTHERPTHR32063:SF13MULTIDRUG EFFLUX PUMP SUBUNIT ACRB-RELATEDcoord: 5..135
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 5..118
IPR001036Acriflavin resistance proteinPFAMPF00873ACR_trancoord: 9..118
e-value: 2.1E-40
score: 138.3
IPR001036Acriflavin resistance proteinPANTHERPTHR32063FAMILY NOT NAMEDcoord: 5..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57607contigP-wetherbeei_contig57607:52..477 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57607.1.1mRNA_P-wetherbeei_contig57607.1.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig57607 52..477 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig57607.1.1 ID=prot_P-wetherbeei_contig57607.1.1|Name=mRNA_P-wetherbeei_contig57607.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp
PTLVLNGLKIDNNLYCQIGLILLIALSAKNAILIVEVGLELHGRDGKPVL
ESAIEAARARFRPILMTSFAFILGVVPLVLATGAGASARKSIGITVFSGM
LASTCLAVLFVPAFFVVVQRFENWRAAKKAPKAQAVAEVKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001036Acrflvin-R