mRNA_P-wetherbeei_contig57559.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57559.1.1
Unique NamemRNA_P-wetherbeei_contig57559.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A401UDL7_9BACT (Peptidase n=1 Tax=Chryseotalea sanaruensis TaxID=2482724 RepID=A0A401UDL7_9BACT)

HSP 1 Score: 166 bits (419), Expect = 3.680e-49
Identity = 77/103 (74.76%), Postives = 93/103 (90.29%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            MNNRR+VP IV+GVI LF++ G+SSSLFYT+EA  RAVLFYKFG GLDK+N+  PGFHTK+PWNEVYVY+V+E SRDE+MD+LDKSGLSIHVDV+VRF+P+ D
Sbjct:    1 MNNRRLVPFIVLGVITLFIIAGISSSLFYTIEAGDRAVLFYKFGAGLDKENIQGPGFHTKAPWNEVYVYSVREQSRDENMDVLDKSGLSIHVDVSVRFSPVSD 103          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A7L9BJQ2_9BACT (Prohibitin family protein n=1 Tax=Flammeovirgaceae bacterium TaxID=2026740 RepID=A0A7L9BJQ2_9BACT)

HSP 1 Score: 158 bits (399), Expect = 3.830e-46
Identity = 71/103 (68.93%), Postives = 91/103 (88.35%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            M   R +P I++GVIALFV+ G+SSSLFYTV+A +RAV+FYKFG GLDK+NV+QPGFHTK+PWN+VY+Y V+ET+ DE+MD+LDK+GL IHVDVTVRF P+P+
Sbjct:    1 MKGNRFLPFIILGVIALFVIAGISSSLFYTVQADERAVIFYKFGSGLDKENVIQPGFHTKAPWNDVYIYTVRETATDENMDVLDKNGLPIHVDVTVRFFPVPE 103          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A364XYS6_9BACT (Prohibitin family protein n=1 Tax=Chryseolinea flava TaxID=2059302 RepID=A0A364XYS6_9BACT)

HSP 1 Score: 157 bits (396), Expect = 1.210e-45
Identity = 68/103 (66.02%), Postives = 92/103 (89.32%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            MNNRR+VP+I++GVI LFV+  +SSSLFYT+  ++RA++FYKFG+GLDK+ V+  GFHTK+PWN+V+VY++ ETS DE+MD+LDK+GLSIHVDV+ R+NPMPD
Sbjct:    1 MNNRRLVPMIIIGVILLFVVMALSSSLFYTIATSERAIIFYKFGEGLDKETVIGEGFHTKAPWNDVFVYSINETSSDENMDVLDKNGLSIHVDVSARYNPMPD 103          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A1M5VI95_9BACT (Regulator of protease activity HflC, stomatin/prohibitin superfamily n=4 Tax=Chryseolinea TaxID=1433993 RepID=A0A1M5VI95_9BACT)

HSP 1 Score: 150 bits (379), Expect = 7.870e-43
Identity = 69/103 (66.99%), Postives = 89/103 (86.41%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            MNNR+ V  IV+GVI L VL  +SSS+FYT+  ++RA++FYKFG GLDKDNV++ GFHTK+PWN++YVY+V E S DE+MD+LDKSGLSIHVDVTVR++PMP+
Sbjct:   28 MNNRKNVIYIVIGVILLIVLMSLSSSMFYTIGPSERAIIFYKFGKGLDKDNVIEQGFHTKAPWNDLYVYSVNEMSSDENMDVLDKSGLSIHVDVTVRYSPMPE 130          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A3D3ICA2_9BACT (Peptidase n=1 Tax=Cytophagales bacterium TaxID=2053541 RepID=A0A3D3ICA2_9BACT)

HSP 1 Score: 144 bits (363), Expect = 9.850e-41
Identity = 64/103 (62.14%), Postives = 87/103 (84.47%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            MNN+++ PII++G+I   V   +SSSLFYT+EAT+RAV+FY FG GLDKDNVM PG H K+PWN+V+VY V ET+ +E+MD+LDK+GLSIH+D++VRF P+P+
Sbjct:    1 MNNKKL-PIIILGIIGFIVFMALSSSLFYTIEATERAVVFYPFGKGLDKDNVMTPGLHFKAPWNDVFVYRVNETNSEENMDVLDKNGLSIHIDISVRFYPLPE 102          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A5C7MPN4_9BACT (Prohibitin family protein n=2 Tax=Cytophagales TaxID=768507 RepID=A0A5C7MPN4_9BACT)

HSP 1 Score: 141 bits (356), Expect = 1.110e-39
Identity = 65/103 (63.11%), Postives = 85/103 (82.52%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            MNNRR+ P I++ VIA  V+  +SSSLFYT+ AT+RAV+FY FG GLDKDN+  PG H K+PWN+VYVY V ETS +E+MD+LDK+GLSIH+D+TVR++P+ D
Sbjct:    1 MNNRRL-PFIILTVIAFIVILALSSSLFYTISATERAVIFYPFGKGLDKDNIEGPGTHMKAPWNDVYVYKVNETSAEENMDVLDKNGLSIHIDITVRYSPIAD 102          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A7Y4XLN6_9BACT (Prohibitin family protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4XLN6_9BACT)

HSP 1 Score: 138 bits (348), Expect = 1.770e-38
Identity = 63/103 (61.17%), Postives = 85/103 (82.52%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            MNNRR+ PII+ GV+ + +L  VSSSLF+T+E+T+RAV+FY F  GLDK+NV+  G H K+PWN++Y+Y V E S DE+MDILDK+GLSIHVD+TVR+ P+P+
Sbjct:    1 MNNRRL-PIIIAGVVGIIILMSVSSSLFFTIESTERAVMFYPFTIGLDKENVIDQGIHWKAPWNKIYIYKVNEQSSDENMDILDKNGLSIHVDITVRYFPIPE 102          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: UPI0019E0DE88 (Uncharacterized protein n=1 Tax=Cytophagales bacterium WSM2-2 TaxID=2774202 RepID=UPI0019E0DE88)

HSP 1 Score: 138 bits (348), Expect = 1.770e-38
Identity = 62/103 (60.19%), Postives = 85/103 (82.52%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            MNNRR+ PI+++ V+A  +L  +SSSL++T+ AT+RA++F  FG GLDK+NV+ PG H K+PWN+VY Y V ETS DE+MD+LDK+GLSIHVD+TVRF P+P+
Sbjct:    1 MNNRRL-PIVILSVVAFIILLTISSSLWFTISATERAIIFRPFGSGLDKENVIGPGTHVKAPWNDVYTYKVNETSSDENMDVLDKNGLSIHVDITVRFYPVPN 102          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A7Y4V7Z3_9BACT (Prohibitin family protein n=1 Tax=Cyclobacteriaceae bacterium TaxID=2099675 RepID=A0A7Y4V7Z3_9BACT)

HSP 1 Score: 138 bits (347), Expect = 2.500e-38
Identity = 66/103 (64.08%), Postives = 82/103 (79.61%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            MNN ++ P I+VG+IA FVL  +SSSLFY V AT+RA++FY FG GLDK +V+ PG H K PWNEV  Y V ETS DE+MD+LDK+GLSIHVD+TVRF P+P+
Sbjct:    1 MNNSKL-PFIIVGIIAFFVLLALSSSLFYNVAATERAIIFYPFGKGLDKTDVIGPGTHLKMPWNEVATYKVNETSSDENMDVLDKNGLSIHVDITVRFYPVPN 102          
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Match: A0A1Z8QDD4_9BACT (Peptidase n=2 Tax=unclassified Flammeovirgaceae TaxID=340671 RepID=A0A1Z8QDD4_9BACT)

HSP 1 Score: 137 bits (346), Expect = 3.900e-38
Identity = 61/103 (59.22%), Postives = 86/103 (83.50%), Query Frame = 1
Query:    1 MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKDNVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNPMPD 309
            M+NR+ +P++++   +L VLF +S+S+F+T++AT+RAV+F KF  GLDKDN+ +PGFH K+PWNEVYVY+V E   +E MD+LDKSGLSI++DVTVRF+PM D
Sbjct:    1 MDNRKYLPLLLILGASLLVLFSISNSIFFTIQATERAVMFKKFSGGLDKDNIFEPGFHVKAPWNEVYVYDVSENQIEETMDVLDKSGLSINIDVTVRFHPMYD 103          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57559.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A401UDL7_9BACT3.680e-4974.76Peptidase n=1 Tax=Chryseotalea sanaruensis TaxID=2... [more]
A0A7L9BJQ2_9BACT3.830e-4668.93Prohibitin family protein n=1 Tax=Flammeovirgaceae... [more]
A0A364XYS6_9BACT1.210e-4566.02Prohibitin family protein n=1 Tax=Chryseolinea fla... [more]
A0A1M5VI95_9BACT7.870e-4366.99Regulator of protease activity HflC, stomatin/proh... [more]
A0A3D3ICA2_9BACT9.850e-4162.14Peptidase n=1 Tax=Cytophagales bacterium TaxID=205... [more]
A0A5C7MPN4_9BACT1.110e-3963.11Prohibitin family protein n=2 Tax=Cytophagales Tax... [more]
A0A7Y4XLN6_9BACT1.770e-3861.17Prohibitin family protein n=1 Tax=Cyclobacteriacea... [more]
UPI0019E0DE881.770e-3860.19Uncharacterized protein n=1 Tax=Cytophagales bacte... [more]
A0A7Y4V7Z3_9BACT2.500e-3864.08Prohibitin family protein n=1 Tax=Cyclobacteriacea... [more]
A0A1Z8QDD4_9BACT3.900e-3859.22Peptidase n=2 Tax=unclassified Flammeovirgaceae Ta... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57559contigP-wetherbeei_contig57559:2..310 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1237149.C900_01581
PFAMsBand_7
Model size309
Max annot lvl976|Bacteroidetes
Hectar predicted targeting categorysignal anchor
Exons1
Evalue3.25e-32
EggNOG OGsCOG0330@1|root,COG0330@2|Bacteria,4NFNB@976|Bacteroidetes,47MT6@768503|Cytophagia
DescriptionPFAM SPFH domain Band 7 family
Cds size309
COG categoryO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186853.4596958-CDS-P-wetherbeei_contig57559:1..3101683186853.4596958-CDS-P-wetherbeei_contig57559:1..310Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57559 2..310 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57559.1.1prot_P-wetherbeei_contig57559.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57559 2..310 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57559.1.1

>prot_P-wetherbeei_contig57559.1.1 ID=prot_P-wetherbeei_contig57559.1.1|Name=mRNA_P-wetherbeei_contig57559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=103bp
MNNRRIVPIIVVGVIALFVLFGVSSSLFYTVEATQRAVLFYKFGDGLDKD
NVMQPGFHTKSPWNEVYVYNVQETSRDEDMDILDKSGLSIHVDVTVRFNP
MPD
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mRNA from alignment at P-wetherbeei_contig57559:2..310-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57559.1.1 ID=mRNA_P-wetherbeei_contig57559.1.1|Name=mRNA_P-wetherbeei_contig57559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig57559:2..310- (Phaeothamnion wetherbeei SAG_119_79)
ATGAATAATCGCAGAATTGTACCCATTATTGTTGTGGGCGTTATTGCCCT TTTTGTGCTTTTTGGTGTTTCCTCAAGCTTATTTTATACAGTTGAAGCAA CCCAACGGGCTGTGCTCTTCTACAAATTCGGAGACGGATTGGATAAGGAC AATGTAATGCAGCCCGGCTTTCACACAAAGTCTCCCTGGAATGAAGTGTA TGTATACAATGTTCAGGAAACTTCCCGCGATGAGGATATGGATATCCTCG ATAAAAGCGGATTGTCTATTCACGTTGACGTAACCGTTCGTTTTAACCCC ATGCCAGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57559:2..310-

>mRNA_P-wetherbeei_contig57559.1.1 ID=mRNA_P-wetherbeei_contig57559.1.1|Name=mRNA_P-wetherbeei_contig57559.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=309bp|location=Sequence derived from alignment at P-wetherbeei_contig57559:2..310- (Phaeothamnion wetherbeei SAG_119_79)
ATGAATAATCGCAGAATTGTACCCATTATTGTTGTGGGCGTTATTGCCCT
TTTTGTGCTTTTTGGTGTTTCCTCAAGCTTATTTTATACAGTTGAAGCAA
CCCAACGGGCTGTGCTCTTCTACAAATTCGGAGACGGATTGGATAAGGAC
AATGTAATGCAGCCCGGCTTTCACACAAAGTCTCCCTGGAATGAAGTGTA
TGTATACAATGTTCAGGAAACTTCCCGCGATGAGGATATGGATATCCTCG
ATAAAAGCGGATTGTCTATTCACGTTGACGTAACCGTTCGTTTTAACCCC
ATGCCAGAT
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