mRNA_P-wetherbeei_contig57390.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: A0A140GVD2_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Rhodoplanes sp. Z2-YC6860 TaxID=674703 RepID=A0A140GVD2_9HYPH) HSP 1 Score: 283 bits (723), Expect = 1.560e-94 Identity = 145/170 (85.29%), Postives = 158/170 (92.94%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
+GLVGPSGSGK+TLLMV+AGLER+DSG I VAG +L LDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAG+GDA AR+ELAKVGL ERL+HYPAQLSGGEQQRVALARALAP+PAILVADEPTGNLDE TGKQI+ L+FAGH+ERGTTL+LVTHD ALA
Sbjct: 48 IGLVGPSGSGKTTLLMVLAGLERADSGQIMVAGSDLRKLDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGHGDAQTRARDELAKVGLAERLHHYPAQLSGGEQQRVALARALAPDPAILVADEPTGNLDEATGKQIIQLLFAGHVERGTTLILVTHDNALA 217
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: A0A833GHD8_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Pseudorhodoplanes sp. TaxID=1934341 RepID=A0A833GHD8_9HYPH) HSP 1 Score: 281 bits (719), Expect = 5.740e-94 Identity = 145/170 (85.29%), Postives = 156/170 (91.76%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
+GLVGPSGSGKSTLLMV+AGLERSDSG++TVAG++LT LDEDALARFRGR+VGIVFQSFHLIPTMTALENVAVPLELAG GDA+ A EL VGL ERL HYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDE TG+QI+DL+F GHIERG TLVLVTHD ALA
Sbjct: 44 IGLVGPSGSGKSTLLMVLAGLERSDSGTVTVAGKDLTGLDEDALARFRGRHVGIVFQSFHLIPTMTALENVAVPLELAGLGDAYDRALAELRNVGLAERLAHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDETTGRQIIDLLFKGHIERGATLVLVTHDPALA 213
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: A0A1W6ZQ98_9HYPH (ABC transporter ATP-binding protein n=1 Tax=Pseudorhodoplanes sinuspersici TaxID=1235591 RepID=A0A1W6ZQ98_9HYPH) HSP 1 Score: 278 bits (711), Expect = 1.240e-92 Identity = 142/170 (83.53%), Postives = 157/170 (92.35%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
+GLVGPSGSGKSTLLMV+AGLER+D+GSITVAGE+LT LDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAG DA A +ELA VGL+ERL+HYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLD+ TG Q+V+L+F GH+ERG TL+LVTHD +LA
Sbjct: 44 IGLVGPSGSGKSTLLMVLAGLERTDTGSITVAGEDLTKLDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGVPDAHERAAKELAGVGLKERLSHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDDKTGSQVVELLFKGHVERGMTLILVTHDPSLA 213
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: A0A346A0A6_9HYPH (ATP-binding cassette domain-containing protein n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A346A0A6_9HYPH) HSP 1 Score: 277 bits (708), Expect = 2.000e-92 Identity = 142/170 (83.53%), Postives = 153/170 (90.00%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
+GL+GPSGSGKSTLLMVMAGLE++DSG++TVAGENLT LDEDALARFRGRN+GIVFQSFHLIPTMTALENVAVP+EL G DA AREEL VGL RLNHYPAQLSGGEQQRVA+ARALAPNPAILVADEPTGNLDE+TGKQIVDL+F G R TTLVLVTHDA LA
Sbjct: 43 IGLIGPSGSGKSTLLMVMAGLEQADSGTVTVAGENLTGLDEDALARFRGRNIGIVFQSFHLIPTMTALENVAVPMELTGAPDAQERAREELVAVGLGARLNHYPAQLSGGEQQRVAVARALAPNPAILVADEPTGNLDEDTGKQIVDLLFEGQARRNTTLVLVTHDAGLA 212
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: A0A363TKA6_9BRAD (ABC transporter ATP-binding protein n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TKA6_9BRAD) HSP 1 Score: 274 bits (701), Expect = 3.150e-91 Identity = 142/170 (83.53%), Postives = 154/170 (90.59%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
+GLVGPSGSGKSTLLMVMAGLER DSG + VAG + ALDEDALARFRGR+VGIVFQSFHLIPTMTALENVAVPLELAG DAF A ELA VGL +R++HYPA+LSGGEQQRVALARALAP+PAILVADEPTGNLDE TG++IV+LMFAGH ERGTTLVLVTHDAALA
Sbjct: 46 IGLVGPSGSGKSTLLMVMAGLERPDSGRVRVAGADFAALDEDALARFRGRHVGIVFQSFHLIPTMTALENVAVPLELAGLDDAFARAERELASVGLADRVHHYPAELSGGEQQRVALARALAPHPAILVADEPTGNLDEATGREIVELMFAGHAERGTTLVLVTHDAALA 215
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: A0A6N7GTB0_9HYPH (ATP-binding cassette domain-containing protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GTB0_9HYPH) HSP 1 Score: 274 bits (701), Expect = 3.360e-91 Identity = 142/170 (83.53%), Postives = 152/170 (89.41%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
+G+VGPSGSGKSTLLMVMAGLER D+GS+TVAGE L AL ED LARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAG DA A +ELA VGL ER +HYPA+LSGGEQQRVALARALAPNPAIL+ADEPTGNLDE TG +IVDLMFAGH +RGTTLVLVTHD ALA
Sbjct: 45 IGMVGPSGSGKSTLLMVMAGLERPDTGSVTVAGEALDALGEDELARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGTSDAHERAAQELAAVGLSERASHYPAELSGGEQQRVALARALAPNPAILIADEPTGNLDETTGAEIVDLMFAGHDKRGTTLVLVTHDNALA 214
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: A0A537V2L6_9PROT (ABC transporter ATP-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537V2L6_9PROT) HSP 1 Score: 270 bits (691), Expect = 1.190e-89 Identity = 139/170 (81.76%), Postives = 152/170 (89.41%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
+GLVGPSGSGKSTLLMV AGLER+D+GS+ VAGE L L EDALARFRGRNVGIVFQSFHLIPTMTALEN+AVPLELAG GDA A ELA VGL ER +HYPA+LSGGEQQRVALARALAPNPAIL+ADEPTGNLDE TG +I+DL+FAGH +RGTTLVLVT+DAALA
Sbjct: 46 IGLVGPSGSGKSTLLMVTAGLERADTGSVVVAGEALGTLSEDALARFRGRNVGIVFQSFHLIPTMTALENIAVPLELAGLGDAHERAARELAAVGLSERQHHYPAELSGGEQQRVALARALAPNPAILIADEPTGNLDEATGAEIIDLLFAGHAQRGTTLVLVTYDAALA 215
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: K8NZI6_9BRAD (ABC transporter domain-containing protein n=9 Tax=Bradyrhizobiaceae TaxID=41294 RepID=K8NZI6_9BRAD) HSP 1 Score: 269 bits (688), Expect = 4.170e-89 Identity = 140/170 (82.35%), Postives = 152/170 (89.41%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
VGL+GPSGSGKSTLLMVMAGLER DSG + V G + ALDED LARFRGR+VGIVFQSFHLIPTMTALENVAVPLELAG DA A +ELA VGL ERL+HYP+QLSGGEQQRVALARA+AP+PAILVADEPTGNLDE+TGKQIVDL+FA H+ERG TLVLVTHDAALA
Sbjct: 50 VGLIGPSGSGKSTLLMVMAGLERPDSGEVVVNGVSFNALDEDGLARFRGRHVGIVFQSFHLIPTMTALENVAVPLELAGRADANARAAQELAGVGLGERLHHYPSQLSGGEQQRVALARAMAPDPAILVADEPTGNLDESTGKQIVDLLFAKHLERGMTLVLVTHDAALA 219
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: A0A0S3PR63_9BRAD (Putative ABC transporter ATP-binding protein/MT1014 n=1 Tax=Variibacter gotjawalensis TaxID=1333996 RepID=A0A0S3PR63_9BRAD) HSP 1 Score: 268 bits (685), Expect = 7.990e-89 Identity = 141/170 (82.94%), Postives = 150/170 (88.24%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
VGL GPSGSGKSTLLMVMAGLER D GS+ VAG +L AL+ED LARFRGR VGIVFQSFHLIPTMTALENVAVPLELAG DAF AR+EL VGL ERL+HYPAQLSGGEQQRVA+ARALAPNPAILVADEPTGNLDE TG+QIVDL+FAGH ER TLVLVTHD +LA
Sbjct: 41 VGLTGPSGSGKSTLLMVMAGLERPDVGSLRVAGTDLGALNEDGLARFRGRQVGIVFQSFHLIPTMTALENVAVPLELAGAPDAFERARKELVAVGLGERLSHYPAQLSGGEQQRVAIARALAPNPAILVADEPTGNLDEGTGRQIVDLLFAGHAERRMTLVLVTHDPSLA 210
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Match: E6VJT3_RHOPX (ABC transporter related protein n=10 Tax=Bradyrhizobiaceae TaxID=41294 RepID=E6VJT3_RHOPX) HSP 1 Score: 268 bits (684), Expect = 1.640e-88 Identity = 140/170 (82.35%), Postives = 148/170 (87.06%), Query Frame = 1
Query: 1 VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRNVGIVFQSFHLIPTMTALENVAVPLELAGNGDAFRLAREELAKVGLEERLNHYPAQLSGGEQQRVALARALAPNPAILVADEPTGNLDENTGKQIVDLMFAGHIERGTTLVLVTHDAALA 510
+GL+GPSGSGKSTLLMVMAGLER DSG + V G LDEDALARFRGR +GIVFQSFHLIPTMTALENVAVPLELAG DA A ELA VGL ERL+HYPAQLSGGEQQRVALARALAP+PAILVADEPTGNLDE TGKQIVDL+FA H+ERG TLVLVTHDAALA
Sbjct: 50 IGLIGPSGSGKSTLLMVMAGLERPDSGEVVVDGTAFNGLDEDALARFRGRQIGIVFQSFHLIPTMTALENVAVPLELAGQTDAADRAARELASVGLGERLHHYPAQLSGGEQQRVALARALAPDPAILVADEPTGNLDEATGKQIVDLLFAKHVERGMTLVLVTHDAALA 219 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57390.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57390.1.1 >prot_P-wetherbeei_contig57390.1.1 ID=prot_P-wetherbeei_contig57390.1.1|Name=mRNA_P-wetherbeei_contig57390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp VGLVGPSGSGKSTLLMVMAGLERSDSGSITVAGENLTALDEDALARFRGRback to top mRNA from alignment at P-wetherbeei_contig57390:1..510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57390.1.1 ID=mRNA_P-wetherbeei_contig57390.1.1|Name=mRNA_P-wetherbeei_contig57390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57390:1..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57390:1..510+ >mRNA_P-wetherbeei_contig57390.1.1 ID=mRNA_P-wetherbeei_contig57390.1.1|Name=mRNA_P-wetherbeei_contig57390.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57390:1..510+ (Phaeothamnion wetherbeei SAG_119_79)back to top |