mRNA_P-wetherbeei_contig5739.1.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A7S2R6S9_9STRA (Rhomboid-like protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R6S9_9STRA) HSP 1 Score: 220 bits (560), Expect = 7.500e-64 Identity = 120/240 (50.00%), Postives = 154/240 (64.17%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWSTADEEAHEQLHQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFGG---SLAWERGRRYAKPACAGMLLLATAAALGWLLMYGAPDPSLRDVCAMFAEY 711
GLAP E NPM+GP+ T L GAK+ ALI Y N+WWRL TP +LHAGFIHL VN++IQ+R+GV LEY+WG + +Y+ S S+++SCI LPD LGVGSSGAIMG++GAW EIVC WS+ EE +L Q SA N ++ LNI +TL FS VP VDWAAH+GGL+AG +G+ LFG S W G R G+++ A G + + DPS RD+ + EY
Sbjct: 191 GLAPTEQNPMVGPYATILDRLGAKNAALIAYRNQWWRLFTPMLLHAGFIHLAVNVLIQVRIGVILEYQWGIAIYTIIYITSGFLSAILSCIALPDSLGVGSSGAIMGILGAWLAEIVCAWSSTPEE---ELGQRSA--------NLVLVFLNILITLSFSLVPLVDWAAHIGGLLAGWMMGVVLFGHKFQSPIWRHGSRIV--CLTGLVVFCVA---GMVTIATTLDPS-RDLLHVCREY 413
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A7S2UT15_9STRA (Rhomboid-like protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UT15_9STRA) HSP 1 Score: 179 bits (454), Expect = 3.910e-50 Identity = 91/187 (48.66%), Postives = 120/187 (64.17%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWSTAD-EEAHEQLHQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFG 558
GLAP +NPM+GPWPT LV +GAK TA I+Y E+WRL++P MLHAGFIH N IQ+R+GV LE EWG W +Y+ S S+ SC+ + +GVGSSGA+MGL+GAW V ++ K +E E+ +Q+ + + I L SFVPYVDWAAH+ GL+AG A+GL+ FG
Sbjct: 60 GLAPIWLNPMIGPWPTALVHYGAKLTARIVYRGEYWRLMSPIMLHAGFIHYACNAYIQLRIGVQLELEWGPTRWFLIYLLSGMTGSIYSCLAHENVVGVGSSGALMGLLGAWVVHLMAKCGEGTPQEQKERNNQLR------------VLLMQIAFVLLLSFVPYVDWAAHLMGLLAGFALGLFFFG 234
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A1Z5KL25_FISSO (Rhomboid-like protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KL25_FISSO) HSP 1 Score: 181 bits (459), Expect = 1.300e-49 Identity = 88/186 (47.31%), Postives = 120/186 (64.52%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWSTADEEAHEQL-HQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLF 555
G+AP ++NPMLGP+P L +G K+ LI+ D EWWRL+TP +LHAG HL N+ +Q+ +G+ E EWG W+ +Y+ S A SS+MS I++P + VGSSGA+MGL GA EIV + D+ ++ H+V E T ++ V L FSFVPYVDWAAHVGGL+AG A+G +F
Sbjct: 111 GVAPIQLNPMLGPYPDALSEWGGKNAPLIVEDGEWWRLITPILLHAGLFHLVGNVAVQLEMGILFEKEWGTIRWLIIYIGSGAGSSIMSVIYMPQAVSVGSSGAVMGLFGAKLAEIVLRVCERDDTVQSRVAHKVRKE-------QCCAVTCSVIVVLLFSFVPYVDWAAHVGGLLAGLALGFMIF 289
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A6T6G4P5_9STRA (Rhomboid-like protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A6T6G4P5_9STRA) HSP 1 Score: 181 bits (458), Expect = 1.260e-48 Identity = 98/243 (40.33%), Postives = 134/243 (55.14%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWSTADEEAHEQL-HQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFG---GSLAWERGRRYAKPACAGMLLLATAAALGWLLMYGAP---DPSLRDVCAMFAE 708
G+AP INPM GP+P L +G K+ IL ++EWWRL+TP MLHAG IHL NI +Q+ G E EWG W+ +Y+ SA SS++S I +PD + VGSSGA+MGL G E++C+ +D+ ++ HQV E G T ++ V + FSF+PYVDWAAH+GGL+AG VG+ +F +L W A G+ + MY L DVC + E
Sbjct: 203 GVAPININPMFGPYPDALSEWGGKNAFNILEEHEWWRLITPIMLHAGVIHLLCNIAVQLETGAFFEREWGSTNWLIIYLTSALGSSVLSVIAMPDAISVGSSGAVMGLFGGKLAEVICRCCESDKTEQGRIGHQVRKEQCAG-------VTCSVVVVMLFSFIPYVDWAAHLGGLLAGLVVGVMVFSLKIKTLTWRLAWFIVGTALTGLFF-----GISLFAMYNGDIDVADELEDVCGYYKE 433
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A7S2IBS3_9DINO (Rhomboid-like protease (Fragment) n=1 Tax=Brandtodinium nutricula TaxID=1333877 RepID=A0A7S2IBS3_9DINO) HSP 1 Score: 171 bits (433), Expect = 6.140e-48 Identity = 90/190 (47.37%), Postives = 118/190 (62.11%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWS-TADEEAHEQLHQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFGGSL 567
GLA E N +GP P L AFGAK+ A IL +EWWRL TP +LHAG +HL N+++Q+R GV LE WG W+A+Y+AS ++SL SC+ LP +LGVGSSGA+ GL GAWF + W+ T + ++ QV A F +A + + SF P VD+AAH+GGL AGG V + LF G L
Sbjct: 9 GLASAEENAFIGPHPHVLDAFGAKNAARILERDEWWRLATPMVLHAGVLHLCGNLLMQLRTGVMLELLWGHSAWLAIYIASGVYASLASCVVLPGRLGVGSSGALCGLFGAWFAFTLITWNQTLPLDVRDRNQQVMA-------IGFCIALIAL-----LSFTPLVDFAAHLGGLAAGGTVAMVLFAGRL 186
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A448ZR26_9STRA (Rhomboid domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZR26_9STRA) HSP 1 Score: 184 bits (468), Expect = 1.260e-47 Identity = 102/240 (42.50%), Postives = 140/240 (58.33%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWSTADEEAHEQL-HQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFGGSLAWERGRRYAKPACAGMLLLATAAALGWLLMYGAPDPS---LRDVCAMFAE 708
G+AP INPM+GP+P L +GAK+T LIL D+EWWRLLTP +LHAG IHL N+++Q+ G E EWG W+ +Y+ SA SS +S + +PD + VGSSGA+MGL G E++C+ + +++ HQV E G + L FSF+PYVDWAAH+GGLVAG VG+ LF +L R + G+ + T A+ + MY + LRDVC + E
Sbjct: 103 GVAPMNINPMIGPYPDALSEWGAKNTVLILEDDEWWRLLTPILLHAGVIHLACNLMVQIDTGAFFEREWGSVNWLIIYLVSAVGSSALSVVAMPDAISVGSSGAVMGLFGGKGAEVICRCCEKESTDQDRIAHQVRKEQCAGVMCSVTXVML-------FSFIPYVDWAAHLGGLVAGFCVGMILFSANLKKARCSKLFWLLI-GVGITITYFAVVFERMYSGEIETAEELRDVCKYYRE 334
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A7S2LY64_9STRA (Rhomboid-like protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LY64_9STRA) HSP 1 Score: 175 bits (443), Expect = 3.800e-47 Identity = 104/245 (42.45%), Postives = 144/245 (58.78%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVC----KWSTADEEAHEQLHQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFGGSLAWERGRRY----AKPACAGMLLLATAAALGWLLMYGAPDPSLRDVCAMFAEY 711
G+AP EINPM+GP+P L +GAK+ LI+ D E +RL+TP LHAG IHL N+++QM G E EWG W+ VY+ SA SS++S I +PDQ+ VGSSG+IMGL GA F EI+ K +T E A EQ + A C F I + + SF+PYVDWAAH+GGLVAG A+G+ F ++ + G + +C +L +T A+ + D +RDVCA + ++
Sbjct: 108 GVAPLEINPMIGPYPDALNYWGAKNAVLIIDDGELYRLITPIFLHAGLIHLAGNVLVQMDSGNRWEKEWGSLIWIIVYIGSAIGSSVLSVIAMPDQISVGSSGSIMGLFGAKFAEIIVLMCEKGTTVRELAAEQSRKEQA-----CHVIF-----GIIIVMAMSFIPYVDWAAHLGGLVAGFAIGIVCFSFTMRNKFGTVFWLGVGVASC--FVLYSTFIAI---MFTTETDDEMRDVCAYYQQF 337
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A6U0S1P1_9STRA (Rhomboid-like protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A6U0S1P1_9STRA) HSP 1 Score: 174 bits (440), Expect = 4.430e-47 Identity = 100/243 (41.15%), Postives = 138/243 (56.79%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWSTADEEAHEQL-HQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFGGSLAWERGRRYAKPACAGMLLLATAAALGWL---LMYGAPDP--SLRDVCAMFAEY 711
G+AP INPM+GP+P + +GAK+ IL D E WRLLTP +LHAG +HL N+ +Q LGV E EWG W+ VY+ S SS++S +PD + VGSSGAIMGL GA EI KW E E++ H V E M + + + + SF+PYVDWAAH+GGL++G AVG+ +F + E+ R+ + ++ + W LMY +P L DVCA + +Y
Sbjct: 90 GIAPLNINPMIGPYPDVMSYWGAKNALKILDDGENWRLLTPVLLHAGILHLIGNVHVQWDLGVFFEKEWGSAAWLIVYLTSGVGSSILSVYCMPDNISVGSSGAIMGLFGAKLSEIFVKWYEPRETILEKVGHAVRKE-------QLCMVSGGVVLVMLLSFIPYVDWAAHLGGLLSGIAVGMVVF----SIEKRNRFWRSVWL-LVGIGLTTLYFWKTIQLMYSGVEPMQDLEDVCAYYQQY 320
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A7S3VDY5_9STRA (Rhomboid-like protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VDY5_9STRA) HSP 1 Score: 175 bits (444), Expect = 2.890e-46 Identity = 100/241 (41.49%), Postives = 138/241 (57.26%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWSTADEEAHEQL-HQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFGGSLAWERGRRYAKP-ACAGML--LLATAAALGWLLMYGAPDPSLRDVCAMFAEY 711
GLAP +NPM+GP P L +G K+ A IL DNE+WRL+TP MLHAG IHLF NI +Q+ +G E EWG W+ +Y+ SA SS+ S F PD + VGSSGA+MGL G EI C+ + + ++ H V E +G + ++ V + FSFVPYVDWAAH+GGLVAG A F + + + +A C G+ L+ + ++L P L+DVC + +Y
Sbjct: 248 GLAPFNMNPMIGPPPDALDYWGGKNAAKILDDNEYWRLVTPIMLHAGIIHLFCNISVQVDIGAFFEREWGSPIWLFIYLTSAVGSSIFSVCFKPDSVSVGSSGAVMGLFGGKLGEIFCRARESRKSPQGRIGHAVRMEQLSG-------SLCSVAVVMAFSFVPYVDWAAHLGGLVAGFAAAFLCFAPKI---KSKGFAVFWFCTGLAINLVMYITLIDYMLNKVEPMDDLKDVCNYYKQY 478
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Match: A0A7S0C3J6_9STRA (Rhomboid-like protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3J6_9STRA) HSP 1 Score: 170 bits (430), Expect = 1.690e-45 Identity = 90/237 (37.97%), Postives = 138/237 (58.23%), Query Frame = 1
Query: 1 GLAPREINPMLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMRLGVHLEYEWGWRPWMAVYVASAAFSSLMSCIFLPDQLGVGSSGAIMGLMGAWFVEIVCKWSTADEEAHEQLHQVSAECSNGCFTNFLMATLNIGVTLGFSFVPYVDWAAHVGGLVAGGAVGLWLFGGSLAWERGRRYAKPACAG---MLLLATAAALGWLLMYGAPDPSLRDVCAMF 702
G+AP +NPM+GP+P L +G K+ L++ + E+WRLL+P +LH+G +HL N+ IQ+ G E EWG + W+ VY++SA +L+SC+ PD + VGSSGA+MGL GA E+ C+ E + H E +G F + + +L F+F+P+VDW++H+GGL+ G +VGL LF L + + AG L+ + AAA+ + +P LRDVC +
Sbjct: 90 GVAPISVNPMVGPYPDALSYWGGKNAYLVVNEYEYWRLLSPVVLHSGVLHLLGNVAIQLETGAFFEREWGSQIWLVVYLSSAMGGTLLSCVAEPDSVSVGSSGAVMGLFGAKIAEVFCRSCQVGTENNSLKHNTHIEQLSGIFCSGTIVSL-------FTFIPFVDWSSHLGGLMTGFSVGLLLFAFQLKNQINFAFWGLLGAGAVAFLVFSFAAAI----VNVSPPEGLRDVCDFY 315 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5739.1.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5739.1.2 >prot_P-wetherbeei_contig5739.1.2 ID=prot_P-wetherbeei_contig5739.1.2|Name=mRNA_P-wetherbeei_contig5739.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=239bp MLGPWPTTLVAFGAKDTALILYDNEWWRLLTPAMLHAGFIHLFVNIVIQMback to top mRNA from alignment at P-wetherbeei_contig5739:9..1932+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5739.1.2 ID=mRNA_P-wetherbeei_contig5739.1.2|Name=mRNA_P-wetherbeei_contig5739.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1924bp|location=Sequence derived from alignment at P-wetherbeei_contig5739:9..1932+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5739:9..1932+ >mRNA_P-wetherbeei_contig5739.1.2 ID=mRNA_P-wetherbeei_contig5739.1.2|Name=mRNA_P-wetherbeei_contig5739.1.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=717bp|location=Sequence derived from alignment at P-wetherbeei_contig5739:9..1932+ (Phaeothamnion wetherbeei SAG_119_79)back to top |