mRNA_P-wetherbeei_contig57363.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A1Q4DBN6_9HYPH (RND transporter n=1 Tax=Rhizobiales bacterium 64-17 TaxID=1895814 RepID=A0A1Q4DBN6_9HYPH) HSP 1 Score: 209 bits (532), Expect = 1.230e-62 Identity = 115/169 (68.05%), Postives = 132/169 (78.11%), Query Frame = 1
Query: 1 PKVAEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXASERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRVPDRSRQHV 507
P VAEAALP LDWWR FRS ELT+IIE+AREANLDIAAAIARIVQADAQAR++GA+LLP +SLD S TRS ASER +A+L SYEIDFWGKNRAALR+AE++AVA+R+DR+VV LTT+ AANAYFQVLAAQDRL AR N S +RV D RQ +
Sbjct: 52 PAVAEAALPRLDWWRSFRSRELTQIIEEAREANLDIAAAIARIVQADAQARVSGAALLPTVSLDGSGTRSRSSQSTGTGVGGASERGLYSASLSGSYEIDFWGKNRAALRSAEESAVATRFDRDVVTLTTMAAAANAYFQVLAAQDRLATARRNITSAQRVLDLIRQRL 220
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: UPI001FF0258F (efflux transporter outer membrane subunit n=1 Tax=Pseudolabrys sp. FHR47 TaxID=2562284 RepID=UPI001FF0258F) HSP 1 Score: 207 bits (528), Expect = 4.830e-62 Identity = 115/169 (68.05%), Postives = 135/169 (79.88%), Query Frame = 1
Query: 1 PKVAEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXASERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRVPDRSRQHV 507
PK+AEAALP LDWWRGFRS ELTEI+EQ+ EANLDIAAAIARIVQADAQ+RI+GA LLP +SL + A+RS A + N+L+A+L ASYE+DFWGKNRA+LR+AEQ+AVA+RYDREVV L+TV +AANAYFQVLAAQDRL AR N AS RV D +Q V
Sbjct: 52 PKIAEAALPKLDWWRGFRSRELTEIVEQSLEANLDIAAAIARIVQADAQSRISGAPLLPSVSLSSDASRSRSSRSVTPT---ARDTNSLSASLTASYELDFWGKNRASLRSAEQSAVAARYDREVVALSTVASAANAYFQVLAAQDRLAAARNNLASANRVLDLIKQRV 217
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A0Q7TLS9_9HYPH (RND transporter n=1 Tax=Pseudolabrys sp. Root1462 TaxID=1736466 RepID=A0A0Q7TLS9_9HYPH) HSP 1 Score: 204 bits (518), Expect = 1.380e-60 Identity = 114/176 (64.77%), Postives = 132/176 (75.00%), Query Frame = 1
Query: 1 PKVAEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXA-------SERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRVPDRSRQHV 507
P++AEAALP LDWWRGFRS ELTEI+EQARE+NLDIAAAI+R++QADA +R+AGA+LLP I + A RS A NTLTA+L ASYEIDFWGKNRAALRA EQTAVASR+DREVV L+T+ TAAN+YFQVLAAQDRL+VAR N A+ RV RQ V
Sbjct: 38 PQIAEAALPKLDWWRGFRSRELTEIVEQARESNLDIAAAISRVIQADANSRVAGAALLPAIDFNGDAARSQASKTTGLGNGAAFVDNSGFRVSNTLTASLSASYEIDFWGKNRAALRALEQTAVASRFDREVVTLSTIATAANSYFQVLAAQDRLRVARSNLAAAERVLSLIRQRV 213
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A371B819_9HYPH (RND transporter n=2 Tax=Pseudolabrys sp. GY_H TaxID=2292256 RepID=A0A371B819_9HYPH) HSP 1 Score: 202 bits (514), Expect = 8.410e-60 Identity = 113/168 (67.26%), Postives = 129/168 (76.79%), Query Frame = 1
Query: 1 PKVAEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXA-------SERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRV 483
PK+AEAALP LDWWRGFRS ELT+I+EQAREANLDIAAAIARIVQADAQ+RI GA+LLP I L+ +A+RS NTL ATL ASYEIDFWGKNRAALR+ EQTAVASR+DR+VV L+T+ TAAN+YFQVLAAQDRL+ AR N A+ RV
Sbjct: 59 PKIAEAALPTLDWWRGFRSRELTDIVEQAREANLDIAAAIARIVQADAQSRIVGAALLPAIDLNGNASRSQASKTTGLGNGQPFVDNNGFRVSNTLNATLSASYEIDFWGKNRAALRSFEQTAVASRFDRDVVTLSTIATAANSYFQVLAAQDRLRAARNNLAAAERV 226
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A345ZY20_9HYPH (RND transporter n=1 Tax=Pseudolabrys taiwanensis TaxID=331696 RepID=A0A345ZY20_9HYPH) HSP 1 Score: 190 bits (483), Expect = 2.110e-55 Identity = 106/167 (63.47%), Postives = 127/167 (76.05%), Query Frame = 1
Query: 4 KVAEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXA-------SERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRV 483
KVAEA+LP LDWWRGFRS ELTEI+E+AR+ANLDIAAA+ARIVQADA +RIAGA+LLP I + A R+ NT++ATL ASYEIDFWGKNRAALR+ E++A ASR+DR+VV L+TV TAAN+YFQVLAAQDRL+VAR N A+ +RV
Sbjct: 41 KVAEASLPSLDWWRGFRSRELTEIVEEARDANLDIAAAVARIVQADANSRIAGAALLPAIDFNGDAARNQASKTTGLGNGQPFVDNSGFRVSNTVSATLTASYEIDFWGKNRAALRSFEESAAASRFDRDVVTLSTVATAANSYFQVLAAQDRLRVARNNLAAAQRV 207
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A6L5FJB7_9HYPH (Efflux transporter outer membrane subunit n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6L5FJB7_9HYPH) HSP 1 Score: 179 bits (454), Expect = 5.530e-51 Identity = 100/168 (59.52%), Postives = 117/168 (69.64%), Query Frame = 1
Query: 7 VAEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXX---------ASERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRV 483
+ ALP +WWRGFRS ELT +IE+A ANLDIAAAIAR++QADAQAR+AGA LLPD++L SA+RS +ERN L ASYEIDFWGKNRA LRAAE+TAV++R+DREVV LT + ANAYFQVLAAQDRL+ AREN S RV
Sbjct: 55 TSRIALPKANWWRGFRSRELTGLIEEAELANLDIAAAIARVIQADAQARVAGAPLLPDVNLSGSASRSRASRATGTRLGGDGGPAERNQPAERNQFVGRLSASYEIDFWGKNRAMLRAAEETAVSTRFDREVVALTAMAAVANAYFQVLAAQDRLRYARENITSANRV 222
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A363TNG1_9BRAD (RND transporter n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TNG1_9BRAD) HSP 1 Score: 176 bits (445), Expect = 6.820e-50 Identity = 97/153 (63.40%), Postives = 113/153 (73.86%), Query Frame = 1
Query: 25 PPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXASERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRV 483
P LDWWRGFRSAELT ++E+A+ +LDIAAA+ARI QADAQ RI GA LLP I LDASA+R+ SER T A L ASYEIDFWGKNRAA RAA Q A+ASR+DR+ V L+TV T AN Y Q+LAAQDRL++AREN A+ RV
Sbjct: 52 PALDWWRGFRSAELTRLVERAQAMSLDIAAAVARIEQADAQTRITGAPLLPLIDLDASASRARAG---------GSERGTYNAVLNASYEIDFWGKNRAAHRAAGQLAIASRFDRDTVALSTVATVANTYLQILAAQDRLRIARENLANANRV 195
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A327L4L2_9HYPH (RND transporter n=1 Tax=Rhodoplanes roseus TaxID=29409 RepID=A0A327L4L2_9HYPH) HSP 1 Score: 173 bits (438), Expect = 9.760e-49 Identity = 94/158 (59.49%), Postives = 120/158 (75.95%), Query Frame = 1
Query: 10 AEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXASERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRV 483
AEA PPLDWWRGFRS ELT ++E+A+ +NLDIAAA+ARIVQADAQAR+ G++LLP++S SATR+ SERN+ T L ASYE+DFWGKNRA+L AA+++AVASR+DR+ V LT + NAYFQ+LAAQDRL++AR N A+ R+
Sbjct: 57 AEAG-PPLDWWRGFRSRELTVLMEEAQTSNLDIAAAVARIVQADAQARVTGSALLPNLSGAGSATRTRTAGASTSSGV-GSERNSYTTYLTASYELDFWGKNRASLLAAQESAVASRFDRDTVALTAMANVGNAYFQLLAAQDRLRIARANLAAANRI 212
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A537NCW9_9PROT (Efflux transporter outer membrane subunit n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NCW9_9PROT) HSP 1 Score: 170 bits (431), Expect = 1.860e-47 Identity = 99/176 (56.25%), Postives = 119/176 (67.61%), Query Frame = 1
Query: 10 AEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXASE------------------RNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRV 483
+EAALPPL+WWRGFRSAELT+++EQA AN DIAAA+ARIVQADAQARIAGA+LLP I+ ASA RS X R TA L ASY++DFWGK RA +RAA+ +A+ASR+DREVV L+T+VT A+ YF VL QDRL+VAREN S R+
Sbjct: 60 SEAALPPLEWWRGFRSAELTDLMEQASAANFDIAAAVARIVQADAQARIAGAALLPSINATASAQRSKSSQAVFGGASXXXXXXXXXXXXXXXXXXXXXARTLYTAALNASYQLDFWGKVRAQIRAADYSALASRFDREVVALSTLVTVADTYFLVLEGQDRLRVARENLTSSERI 235
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Match: A0A521W1F0_9HYPH (Efflux transporter outer membrane subunit n=1 Tax=Xanthobacteraceae bacterium TaxID=2021379 RepID=A0A521W1F0_9HYPH) HSP 1 Score: 169 bits (429), Expect = 2.330e-47 Identity = 95/169 (56.21%), Postives = 118/169 (69.82%), Query Frame = 1
Query: 1 PKVAEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQARIAGASLLPDISLDASATRSXXXXXXXXXXXXASERNTLTATLGASYEIDFWGKNRAALRAAEQTAVASRYDREVVGLTTVVTAANAYFQVLAAQDRLQVARENQASGRRVPDRSRQHV 507
P+ A AA P LDWWR FRS+ELT ++E+AR N DIAAA ARI+QADAQARIAGA LLP ++ +A+ T + T TA L ASYEIDFWGKN A AA +TA ASR+D +V+GLTT+ T AN+YFQ+LAAQDRL++AR N AS +R+ D +Q V
Sbjct: 49 PEAARAAPPALDWWRDFRSSELTALMEEARRVNFDIAAARARILQADAQARIAGAPLLPALNAEANVTSVKSSVNAGGSGRTVT---TYTAGLSASYEIDFWGKNHDAALAAVETATASRFDHDVIGLTTLATVANSYFQMLAAQDRLRIARNNIASAKRIYDAIKQRV 214 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57363.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57363.1.1 >prot_P-wetherbeei_contig57363.1.1 ID=prot_P-wetherbeei_contig57363.1.1|Name=mRNA_P-wetherbeei_contig57363.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=170bp PKVAEAALPPLDWWRGFRSAELTEIIEQAREANLDIAAAIARIVQADAQAback to top mRNA from alignment at P-wetherbeei_contig57363:2..511+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57363.1.1 ID=mRNA_P-wetherbeei_contig57363.1.1|Name=mRNA_P-wetherbeei_contig57363.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57363:2..511+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57363:2..511+ >mRNA_P-wetherbeei_contig57363.1.1 ID=mRNA_P-wetherbeei_contig57363.1.1|Name=mRNA_P-wetherbeei_contig57363.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=510bp|location=Sequence derived from alignment at P-wetherbeei_contig57363:2..511+ (Phaeothamnion wetherbeei SAG_119_79)back to top |