mRNA_P-wetherbeei_contig5729.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5729.4.1
Unique NamemRNA_P-wetherbeei_contig5729.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A3C0TYD4_9PROT (Thioesterase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3C0TYD4_9PROT)

HSP 1 Score: 270 bits (689), Expect = 1.560e-90
Identity = 134/162 (82.72%), Postives = 144/162 (88.89%), Query Frame = 1
Query:    7 FEARPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRKTAA 492
            F + PIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALD+VFDLLDIGVDY+QRTGDSAFVLQNHVAYLAELK GDPIRV+FQLLD D KKVHYFM M HA EG+L+AT EQ+MMHVSL TRRSSPFP  AQ K AA+ EAH  LPRP++AGA IGIRRKTAA
Sbjct:    6 FASEPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDRVFDLLDIGVDYVQRTGDSAFVLQNHVAYLAELKQGDPIRVTFQLLDRDKKKVHYFMQMFHADEGYLSATAEQIMMHVSLSTRRSSPFPPEAQDKLAALWEAHKNLPRPQSAGAGIGIRRKTAA 167          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A352KF12_9PROT (Thioesterase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KF12_9PROT)

HSP 1 Score: 214 bits (546), Expect = 1.290e-68
Identity = 103/162 (63.58%), Postives = 127/162 (78.40%), Query Frame = 1
Query:    7 FEARPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRKTAA 492
            F+ +PI I GQ VL +WIDYNGHMNVAFYVLAFD+ALD+VFD + IGVDY+ RT +S FVLQNHV+Y+ ELKLGDP+ VSFQLLD DAK+ HYF+ M+H  E +LAAT EQ+ +HVSL++RRS+PFP       A +  AH +LP PE AGA IG+ RK+AA
Sbjct:   16 FDQQPIMIDGQEVLEDWIDYNGHMNVAFYVLAFDRALDRVFDRIGIGVDYVARTNNSIFVLQNHVSYMNELKLGDPVSVSFQLLDHDAKRFHYFLRMYHGQEQYLAATAEQLAIHVSLDSRRSAPFPPDIAQNLATLGAAHARLPLPENAGARIGLTRKSAA 177          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A381S6S5_9ZZZZ (Uncharacterized protein n=1 Tax=marine metagenome TaxID=408172 RepID=A0A381S6S5_9ZZZZ)

HSP 1 Score: 186 bits (471), Expect = 2.080e-57
Identity = 85/158 (53.80%), Postives = 116/158 (73.42%), Query Frame = 1
Query:   10 EARPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRK 483
            + +P+E+   TVLPEWIDYNGHMNVA+YVLAFD  +D   + + I   Y+++   S F L+ HV+Y+ EL+LGDP+R++ QLLD+D K+VHYF+HMHHA + +LAA +EQ+M+HV LETRRSS FP   +    ++  AH  LP PE +G+ IGIRRK
Sbjct:    6 DLKPLELPTLTVLPEWIDYNGHMNVAYYVLAFDHGVDAFMEFIGISPSYIEQRRASTFTLEMHVSYIRELRLGDPLRLNCQLLDFDTKRVHYFLHMHHAEDDYLAAVSEQIMVHVDLETRRSSEFPDDVRLTLKSLMNAHRHLPLPEQSGSVIGIRRK 163          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A2E6LQI5_9GAMM (Thioesterase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E6LQI5_9GAMM)

HSP 1 Score: 185 bits (469), Expect = 4.610e-57
Identity = 90/150 (60.00%), Postives = 113/150 (75.33%), Query Frame = 1
Query:   37 QTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRKT 486
            Q V   WIDYNGHMN+AFY +AFD+ALD V+DLL IG DY+   G S F  + HV YL EL L DPIRV FQLLD DAK++H+F HM+HA +G+LAAT+EQ+ +HV + +RR++PFPA A A+  A+ E H  LPRPE AG +IGIRRK+
Sbjct:   17 QRVEAAWIDYNGHMNMAFYNVAFDRALDHVYDLLGIGADYVAEGGGSCFTAEVHVNYLQELLLDDPIRVEFQLLDRDAKRLHFFEHMYHAEQGYLAATSEQLAIHVDMASRRAAPFPADAAARIDALFERHAALPRPELAGRTIGIRRKS 166          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A3D1RYM2_9GAMM (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A3D1RYM2_9GAMM)

HSP 1 Score: 184 bits (468), Expect = 6.540e-57
Identity = 86/156 (55.13%), Postives = 114/156 (73.08%), Query Frame = 1
Query:   13 ARPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRR 480
            + P++++ Q VLPEWID+NGHMNVA+YV+AFD  +D + + LDIG + + R G S F L+ H+ YL EL LGDP+R++ QLLD+DAK++HYF HM+HA EG+LAAT EQ+++HV L  RRS PFP   Q     +   H  LPRPE AG +IGIRR
Sbjct:   10 SAPLKLSDQKVLPEWIDFNGHMNVAYYVVAFDHGVDGLANHLDIGPEGIDRRGTSTFTLEMHINYLKELNLGDPLRLTCQLLDFDAKRIHYFFHMYHAHEGYLAATCEQMLLHVDLAERRSCPFPNNVQQALTELMALHRALPRPEQAGRAIGIRR 165          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A418WDW4_9PROT (Thioesterase-like protein n=1 Tax=Oleomonas cavernae TaxID=2320859 RepID=A0A418WDW4_9PROT)

HSP 1 Score: 184 bits (467), Expect = 8.430e-57
Identity = 93/164 (56.71%), Postives = 117/164 (71.34%), Query Frame = 1
Query:    1 MIFEARPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRKTAA 492
            M FEA P++     VLPEWIDYNGHMNVA+YVLAFD+ALD+VFD  D G DY+ R+  S FVL+ HV YL E+  GDP+  +FQL+D DAK++HYF+ M HA  GFLAAT+EQV +HV LE RRS+  P   QA +A + E HG LP P+  G +I +R+  AA
Sbjct:    1 MSFEA-PLDCGQAVVLPEWIDYNGHMNVAYYVLAFDQALDRVFDRFDCGKDYVARSNHSFFVLEAHVRYLQEVTQGDPLAFTFQLIDHDAKRLHYFVEMRHAELGFLAATSEQVALHVDLEDRRSAAMPPQQQALFAQIAEDHGALPLPDGLGRNIRLRKPAAA 163          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A836TNH1_9PROT (Thioesterase n=1 Tax=Sneathiellales bacterium TaxID=2528251 RepID=A0A836TNH1_9PROT)

HSP 1 Score: 183 bits (464), Expect = 2.330e-56
Identity = 88/157 (56.05%), Postives = 118/157 (75.16%), Query Frame = 1
Query:   19 PIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRKTA 489
            P+ I   TVLPEWIDYNGHMNVAFY LAFDK++D+ FDL+ IGVDY+++T +SAF+L++HV Y+ E+  GDP+R + +LLD DAK+ HY++ M HA+E +LAAT+EQ+++H+ L TRR+S FP  A  K   M E H +   PE  G  IGIRRK+A
Sbjct:    6 PLPIFECTVLPEWIDYNGHMNVAFYNLAFDKSVDEFFDLIGIGVDYVEQTNNSAFILESHVHYMQEVVEGDPLRFTLRLLDVDAKRAHYYLEMFHASENYLAATSEQILIHLDLGTRRTSEFPQDALDKLYEMAEFHKQAEVPERVGHVIGIRRKSA 162          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A2E7TBG0_9GAMM (Uncharacterized protein n=1 Tax=Acidiferrobacteraceae bacterium TaxID=2024893 RepID=A0A2E7TBG0_9GAMM)

HSP 1 Score: 183 bits (465), Expect = 3.310e-56
Identity = 87/157 (55.41%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   13 ARPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRK 483
            ++ + +    VLPEWIDYNGHMNVA+YVLAFDKA+D + D + I   Y+++   S F L+ HV Y+ EL+LGDPI ++  LLD+DAK++HYFM+M  A E +LAAT+EQ+MMHV+LE RRSS FP    A+  A+++AH +LPRPE  G+ IGIRRK
Sbjct:   26 SKLLTLPSLRVLPEWIDYNGHMNVAYYVLAFDKAVDALMDTIGITPSYIEQYHSSTFTLEIHVNYIQELRLGDPISLNCHLLDFDAKRIHYFMYMRQANENYLAATSEQIMMHVNLENRRSSEFPNHIVAQLEALRDAHNELPRPENCGSVIGIRRK 182          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A3D5FHG0_9GAMM (Uncharacterized protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5FHG0_9GAMM)

HSP 1 Score: 182 bits (462), Expect = 4.850e-56
Identity = 86/157 (54.78%), Postives = 117/157 (74.52%), Query Frame = 1
Query:   13 ARPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRK 483
            + P+E++ Q VL EWIDYNGHMNVA+YVLAFD+ +D++   + +   Y++R   S F L+ H+ YL EL LGDPIR+++QLLD+DAK++HYF+ M+HA E FLAAT+EQ+M+HVSL +RRSSPFP   Q   A +  AH  LPRP+ AG  IGI ++
Sbjct:    7 SAPLELSRQRVLAEWIDYNGHMNVAYYVLAFDRGVDELMGHVGLTPAYIEREASSTFTLEMHINYLQELHLGDPIRLAWQLLDFDAKRMHYFLRMYHAEEDFLAATSEQIMLHVSLASRRSSPFPETIQNTLAQLLAAHRDLPRPQQAGRVIGIAKR 163          
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Match: A0A2G2KJT8_9PROT (Thioesterase n=4 Tax=Bacteria TaxID=2 RepID=A0A2G2KJT8_9PROT)

HSP 1 Score: 179 bits (455), Expect = 6.180e-55
Identity = 85/155 (54.84%), Postives = 113/155 (72.90%), Query Frame = 1
Query:   19 PIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGVDYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMHHATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPETAGASIGIRRK 483
            P+E + Q VLPEWID+NGHMNVA+YV+AFD  +D +   LDIG + ++  G S F L+ H  YL EL L DPIR++ QLLD+D+K+VH+F +M+H  E +LAAT EQ+++HV+LE RRSSPFP  A +K   +   H +LPRPE AG  IGIRR+
Sbjct:   12 PLEFSDQQVLPEWIDFNGHMNVAYYVMAFDHGVDGLTSYLDIGPEGIETRGTSTFTLEMHTNYLQELHLDDPIRLTCQLLDYDSKRVHFFFNMYHTEENYLAATCEQLLLHVNLEERRSSPFPQSAVSKLETLMLLHRQLPRPEKAGRPIGIRRR 166          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5729.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0TYD4_9PROT1.560e-9082.72Thioesterase n=1 Tax=Alphaproteobacteria bacterium... [more]
A0A352KF12_9PROT1.290e-6863.58Thioesterase n=6 Tax=Alphaproteobacteria bacterium... [more]
A0A381S6S5_9ZZZZ2.080e-5753.80Uncharacterized protein n=1 Tax=marine metagenome ... [more]
A0A2E6LQI5_9GAMM4.610e-5760.00Thioesterase n=1 Tax=Gammaproteobacteria bacterium... [more]
A0A3D1RYM2_9GAMM6.540e-5755.13Uncharacterized protein n=4 Tax=root TaxID=1 RepID... [more]
A0A418WDW4_9PROT8.430e-5756.71Thioesterase-like protein n=1 Tax=Oleomonas cavern... [more]
A0A836TNH1_9PROT2.330e-5656.05Thioesterase n=1 Tax=Sneathiellales bacterium TaxI... [more]
A0A2E7TBG0_9GAMM3.310e-5655.41Uncharacterized protein n=1 Tax=Acidiferrobacterac... [more]
A0A3D5FHG0_9GAMM4.850e-5654.78Uncharacterized protein n=2 Tax=Gammaproteobacteri... [more]
A0A2G2KJT8_9PROT6.180e-5554.84Thioesterase n=4 Tax=Bacteria TaxID=2 RepID=A0A2G2... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5729contigP-wetherbeei_contig5729:3000..3494 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1205680.CAKO01000029_gene5289
PFAMs4HBT_2
Model size495
Max annot lvl204441|Rhodospirillales
KEGG koko:K07107
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.9e-50
EggNOG OGsCOG0824@1|root,COG0824@2|Bacteria,1MZB3@1224|Proteobacteria,2U7CU@28211|Alphaproteobacteria,2JTMB@204441|Rhodospirillales
DescriptionThioesterase-like superfamily
Cds size495
COG categoryS
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186849.962696-CDS-P-wetherbeei_contig5729:2999..34941683186849.962696-CDS-P-wetherbeei_contig5729:2999..3494Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5729 3000..3494 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5729.4.1prot_P-wetherbeei_contig5729.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5729 3000..3494 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5729.4.1

>prot_P-wetherbeei_contig5729.4.1 ID=prot_P-wetherbeei_contig5729.4.1|Name=mRNA_P-wetherbeei_contig5729.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=165bp
MIFEARPIEITGQTVLPEWIDYNGHMNVAFYVLAFDKALDQVFDLLDIGV
DYMQRTGDSAFVLQNHVAYLAELKLGDPIRVSFQLLDWDAKKVHYFMHMH
HATEGFLAATTEQVMMHVSLETRRSSPFPAGAQAKWAAMQEAHGKLPRPE
TAGASIGIRRKTAA*
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mRNA from alignment at P-wetherbeei_contig5729:3000..3494+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5729.4.1 ID=mRNA_P-wetherbeei_contig5729.4.1|Name=mRNA_P-wetherbeei_contig5729.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig5729:3000..3494+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTTTCGAAGCCAGACCCATTGAAATTACCGGGCAGACCGTGCTGCC CGAATGGATCGATTATAACGGCCATATGAATGTGGCGTTTTACGTGCTGG CCTTCGACAAGGCATTGGATCAGGTGTTCGACCTGCTGGATATCGGCGTT GATTATATGCAGCGCACCGGGGATTCGGCCTTTGTGTTGCAAAACCATGT GGCCTATCTGGCGGAGCTGAAACTGGGCGATCCGATCCGCGTGAGTTTTC AACTGCTCGATTGGGACGCCAAAAAAGTGCATTATTTCATGCATATGCAC CACGCAACTGAAGGCTTCCTGGCCGCAACCACCGAACAGGTGATGATGCA TGTCAGCCTGGAAACACGGCGTTCGTCCCCGTTTCCCGCCGGGGCGCAGG CAAAATGGGCCGCAATGCAGGAAGCGCATGGCAAATTACCGCGCCCGGAA ACCGCCGGGGCCAGCATTGGCATCCGCCGCAAGACGGCGGCCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5729:3000..3494+

>mRNA_P-wetherbeei_contig5729.4.1 ID=mRNA_P-wetherbeei_contig5729.4.1|Name=mRNA_P-wetherbeei_contig5729.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=495bp|location=Sequence derived from alignment at P-wetherbeei_contig5729:3000..3494+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATTTTCGAAGCCAGACCCATTGAAATTACCGGGCAGACCGTGCTGCC
CGAATGGATCGATTATAACGGCCATATGAATGTGGCGTTTTACGTGCTGG
CCTTCGACAAGGCATTGGATCAGGTGTTCGACCTGCTGGATATCGGCGTT
GATTATATGCAGCGCACCGGGGATTCGGCCTTTGTGTTGCAAAACCATGT
GGCCTATCTGGCGGAGCTGAAACTGGGCGATCCGATCCGCGTGAGTTTTC
AACTGCTCGATTGGGACGCCAAAAAAGTGCATTATTTCATGCATATGCAC
CACGCAACTGAAGGCTTCCTGGCCGCAACCACCGAACAGGTGATGATGCA
TGTCAGCCTGGAAACACGGCGTTCGTCCCCGTTTCCCGCCGGGGCGCAGG
CAAAATGGGCCGCAATGCAGGAAGCGCATGGCAAATTACCGCGCCCGGAA
ACCGCCGGGGCCAGCATTGGCATCCGCCGCAAGACGGCGGCCTGA
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