mRNA_P-wetherbeei_contig5729.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A352KF15_9PROT (Acyl-CoA dehydrogenase n=5 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A352KF15_9PROT) HSP 1 Score: 410 bits (1054), Expect = 1.080e-141 Identity = 193/225 (85.78%), Postives = 209/225 (92.89%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
MQTFSFDPVE+PPAAA+LR EVR+FLAEHN++R PL+RAQSWSGSDPEFSRKMGERG+IGMVWPK YGGHER+SFERYVMLEEMLVAGAPVGAHW+ADRQSGPLLL FGTE QRQKYLPPVTRGEM+YCIGMSEPDSGSDLASVR+KA KVDGGYL+ GRKIWTSGAHTAHVMI L RT +NPD R +GLTQFLIDLRDLDGTDLK KN I VRP+ S+LGEHHF
Sbjct: 1 MQTFSFDPVELPPAAAELRREVREFLAEHNATRKPLDRAQSWSGSDPEFSRKMGERGWIGMVWPKTYGGHERTSFERYVMLEEMLVAGAPVGAHWIADRQSGPLLLNFGTEAQRQKYLPPVTRGEMYYCIGMSEPDSGSDLASVRTKATKVDGGYLINGRKIWTSGAHTAHVMIALLRTRNNPDNRHDGLTQFLIDLRDLDGTDLKEKNGITVRPVISMLGEHHF 225
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A7HRL4_PARL1 (Acyl-CoA dehydrogenase domain protein n=6 Tax=Alphaproteobacteria TaxID=28211 RepID=A7HRL4_PARL1) HSP 1 Score: 303 bits (776), Expect = 1.270e-99 Identity = 147/225 (65.33%), Postives = 171/225 (76.00%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
MQ F FD E+P LR E+R FLAE ++RAQ+WSGSDPEFSRKMG +G+IGM WPK+YGGHERS F+RYVMLEEML AGAPVGAHW+ DRQSGPLLLRFGTE QRQK LP V +GE ++CIGMSEPDSGSDLA+ R++A KVDGGY V G K+WTSGAHTAH MIGLFRT +P + GLTQFL+DL++ DG I +RPI+ L G HF
Sbjct: 1 MQPFRFDLCELPGETKGLREEIRAFLAEELPRIPLVKRAQTWSGSDPEFSRKMGAKGWIGMTWPKQYGGHERSFFDRYVMLEEMLAAGAPVGAHWIGDRQSGPLLLRFGTEAQRQKILPRVAKGECYFCIGMSEPDSGSDLAATRTRADKVDGGYKVNGTKLWTSGAHTAHYMIGLFRTNLDPQNKHAGLTQFLVDLKNTDG--------ITIRPIKDLAGNAHF 217
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A2N3EJ99_9PROT (Acyl-CoA dehydrogenase n=1 Tax=Alphaproteobacteria bacterium HGW-Alphaproteobacteria-11 TaxID=2013657 RepID=A0A2N3EJ99_9PROT) HSP 1 Score: 300 bits (768), Expect = 2.070e-98 Identity = 143/225 (63.56%), Postives = 173/225 (76.89%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
MQ F FD E+P LR +VR FLA+ ++ + RAQ+WSGSDPEFSRKMG +G+I M WPKKYGGHERS+F+RYV+LEEML AGAPVGAHW+ DRQSGPLL+RFGTEEQRQK LP V +GE ++CIGMSEPDSGSDLA+ R++A KV+GGY V G K+WTSGAHTAH MIGLFRT +P + GLTQFL+D++ DG + VRPI+ L G+ HF
Sbjct: 1 MQAFHFDLCELPGETKGLRDDVRAFLAKELANVPAVTRAQTWSGSDPEFSRKMGAKGWIAMTWPKKYGGHERSAFDRYVVLEEMLAAGAPVGAHWIGDRQSGPLLMRFGTEEQRQKILPRVAKGECYFCIGMSEPDSGSDLAATRTRAEKVEGGYKVNGTKLWTSGAHTAHYMIGLFRTHLDPQNKHAGLTQFLVDMKTTDG--------VTVRPIKDLAGKSHF 217
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A6N6VLI9_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VLI9_9HYPH) HSP 1 Score: 294 bits (752), Expect = 4.980e-96 Identity = 147/225 (65.33%), Postives = 170/225 (75.56%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
MQTF FD E+P LR EVRDFLA + RAQ+WSGSDPEFSRKMG +G+IGM WPK+YGGHERS+F+RYV+LEEML AGAPVGAHW+ DRQSGPLLL FGTEEQRQ LP V RGE ++CIGMSEPDSGSDLA+ R+KA KV+GGY V G K+WTSGAH AH MI LFRT +PD + GLTQFL+DL++ DG I +RPI+ L G HF
Sbjct: 1 MQTFRFDLCELPEETKGLRQEVRDFLAVELKHIPAVTRAQTWSGSDPEFSRKMGAKGWIGMRWPKQYGGHERSAFDRYVVLEEMLAAGAPVGAHWIGDRQSGPLLLNFGTEEQRQLILPKVARGECYFCIGMSEPDSGSDLAATRTKAEKVEGGYKVNGTKLWTSGAHHAHYMIALFRT--SPD-KHTGLTQFLVDLKNTDG--------ITIRPIKDLAGNSHF 214
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A2Z4UG97_9HYPH (Acyl-CoA dehydrogenase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2Z4UG97_9HYPH) HSP 1 Score: 293 bits (749), Expect = 1.510e-95 Identity = 140/225 (62.22%), Postives = 166/225 (73.78%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
MQTF FDP +PP A LR EVR FL++ + P+ RAQ+WSG DPEFS+K+G +G+IGM WPKKYGGHERS+ ERYVMLEEML AGAPVGAHW+ DRQSG LLL+FGTEEQRQ LP +GE+ +CIGMSEPDSGSDLA+ R+KA K DGG++V G K+WTS AH AH MI LFRT +PD + GLTQFL+DL I +RPI+ L G HF
Sbjct: 1 MQTFRFDPCRLPPEAEALRGEVRAFLSDALTDIPPVIRAQTWSGYDPEFSKKLGAKGWIGMTWPKKYGGHERSALERYVMLEEMLAAGAPVGAHWIGDRQSGQLLLKFGTEEQRQMILPKAAKGELLFCIGMSEPDSGSDLAATRTKAEKTDGGWIVNGTKLWTSNAHNAHYMIALFRTNFDPDNKHAGLTQFLVDL---------TIPGITIRPIKDLTGNAHF 216
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A7V4CZA9_9BACT (Acyl-CoA dehydrogenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A7V4CZA9_9BACT) HSP 1 Score: 291 bits (744), Expect = 8.610e-95 Identity = 140/225 (62.22%), Postives = 165/225 (73.33%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
M F F E+PP A LR EVR+FL E R+ ++RA SW G DPEFSR +G RG+IGM WPK+YGGHER+ ERYV+LEEML AGAPVGAHWVADRQSGPLLLRFGTE QR+++LP + RGE+++ IGMSEPDSGSDLAS+R++AV+ DGGYLV G K+WTS AH AH I LFRT PD + EGL+QFL+DL I VRPI L G HHF
Sbjct: 1 MAIFKFALTELPPEAEALRAEVREFLRETIGDRAAVQRAASWGGWDPEFSRMVGARGWIGMTWPKRYGGHERTFLERYVVLEEMLAAGAPVGAHWVADRQSGPLLLRFGTEAQRERFLPAIARGELYFAIGMSEPDSGSDLASIRTRAVRTDGGYLVNGTKVWTSNAHQAHYAIALFRTAVVPDRKHEGLSQFLVDL---------GSPGITVRPIVDLAGSHHF 216
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A2E5BTZ3_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2E5BTZ3_9HYPH) HSP 1 Score: 288 bits (738), Expect = 6.960e-94 Identity = 142/225 (63.11%), Postives = 165/225 (73.33%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
M F FDP +PP A LR EVR FLAE + + RAQ+WSG DP FSRK+GE G+IGM WPKKYGGHER++ ERYV+LEEML AGAPVGAHW+ DRQSGPLLLRFGTEEQRQK LP +GE+ +CIGMSEPDSGSDLA+ R+KAV+V+ G+LV G K+WTS AH AH MI LFRT D + GLTQFL+DL L G I +RPI+ L G HF
Sbjct: 1 MHEFRFDPCRLPPEAETLRREVRAFLAEALTDIPAVTRAQTWSGYDPAFSRKLGEMGWIGMTWPKKYGGHERTALERYVVLEEMLAAGAPVGAHWIGDRQSGPLLLRFGTEEQRQKILPRAAKGELLFCIGMSEPDSGSDLAATRTKAVRVENGWLVNGTKLWTSNAHNAHYMIALFRTNFAEDAKHTGLTQFLVDLT-LPG--------ITIRPIKDLTGNAHF 216
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A081BAT3_9HYPH (Acyl-CoA dehydrogenase domain-containing protein n=1 Tax=Tepidicaulis marinus TaxID=1333998 RepID=A0A081BAT3_9HYPH) HSP 1 Score: 286 bits (733), Expect = 3.970e-93 Identity = 139/225 (61.78%), Postives = 163/225 (72.44%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
MQ F FD +PP A LR EVR FLA+ + RAQ+W G D EFSRK+GE+G+IG+ WPKKYGGHERS+FERYV+LEEML AGAPVGAHW+ADRQSGPLLL FGTEEQRQ LP + +G F+CIGMSEPDSGSDLA+ R++A KV+GGY V G K+WTS AH AH MI LFRT +PD + GLTQFL+DL+ I +RPI L G HF
Sbjct: 1 MQEFRFDLCTLPPEAEALRKEVRAFLADELKDMPAVTRAQTWMGFDAEFSRKVGEKGWIGLTWPKKYGGHERSAFERYVVLEEMLAAGAPVGAHWIADRQSGPLLLNFGTEEQRQMLLPEIAKGTCFFCIGMSEPDSGSDLAATRTRAEKVEGGYKVNGTKLWTSNAHKAHYMIALFRTHFDPDNKHAGLTQFLVDLKT---------PGITIRPITDLAGNAHF 216
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A2A4RYM8_9HYPH (Acyl-CoA dehydrogenase n=2 Tax=Rhodobiaceae bacterium TaxID=2026785 RepID=A0A2A4RYM8_9HYPH) HSP 1 Score: 286 bits (732), Expect = 5.630e-93 Identity = 138/225 (61.33%), Postives = 166/225 (73.78%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
MQ+F FD E+P LR EVR FLAE RAQ+W D EFS+K+G +G+IG+ WPKKYGGHER++F+RYV+LEEML AGAPVGAHW+ADRQSGPLLL+FGTEEQRQ +L PVT+GE ++CIGMSEPDSGSDLA+ R++AVK DGG++V G K+WTSGA AHVMI LFRT NP+ R GLTQFL+DL+ I +RPI L G HF
Sbjct: 1 MQSFRFDLCELPKETESLRQEVRAFLAEELKDVPLTTRAQTWMSFDGEFSKKVGAKGWIGLTWPKKYGGHERTAFDRYVVLEEMLAAGAPVGAHWIADRQSGPLLLKFGTEEQRQTFLEPVTKGESYFCIGMSEPDSGSDLAATRTRAVKTDGGWIVNGTKLWTSGAQHAHVMIALFRTEQNPENRHGGLTQFLVDLKT---------PGINIRPITDLYGSQHF 216
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Match: A0A845QAB5_9HYPH (Acyl-CoA dehydrogenase n=1 Tax=Pyruvatibacter mobilis TaxID=1712261 RepID=A0A845QAB5_9HYPH) HSP 1 Score: 286 bits (731), Expect = 8.220e-93 Identity = 140/225 (62.22%), Postives = 166/225 (73.78%), Query Frame = 1
Query: 1 MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSRKMGERGFIGMVWPKKYGGHERSSFERYVMLEEMLVAGAPVGAHWVADRQSGPLLLRFGTEEQRQKYLPPVTRGEMFYCIGMSEPDSGSDLASVRSKAVKVDGGYLVTGRKIWTSGAHTAHVMIGLFRTGSNPDGRQEGLTQFLIDLRDLDGTDLKAKNNILVRPIRSLLGEHHF 675
MQTF FDP ++P LR E+RDFLA + +RA++W G D +FSRKMGERG+IGM WPK+YGGHERS+ ERYV+LEEML AGAPV AHW+ DRQSGPLLL +GTEEQRQKYLP + G+ F+CIGMSEPDSGSDLASVR++A + D G+ VTG K+WTSGAH +HVMI LFRT + R GLTQFL+DL D G I VRPI+ L G HF
Sbjct: 1 MQTFRFDPCDLPDGTQALRQELRDFLAAELTDYPARKRAETWMGWDADFSRKMGERGWIGMTWPKQYGGHERSALERYVVLEEMLSAGAPVAAHWIGDRQSGPLLLNYGTEEQRQKYLPRIASGQCFFCIGMSEPDSGSDLASVRTRAERTDEGWRVTGTKLWTSGAHKSHVMIALFRTSTEEGNRHGGLTQFLVDL-DTPG--------ITVRPIKDLSGNAHF 216 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5729.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5729.1.1 >prot_P-wetherbeei_contig5729.1.1 ID=prot_P-wetherbeei_contig5729.1.1|Name=mRNA_P-wetherbeei_contig5729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=225bp MQTFSFDPVEMPPAAAKLRLEVRDFLAEHNSSRSPLERAQSWSGSDPEFSback to top mRNA from alignment at P-wetherbeei_contig5729:2..676- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5729.1.1 ID=mRNA_P-wetherbeei_contig5729.1.1|Name=mRNA_P-wetherbeei_contig5729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig5729:2..676- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5729:2..676- >mRNA_P-wetherbeei_contig5729.1.1 ID=mRNA_P-wetherbeei_contig5729.1.1|Name=mRNA_P-wetherbeei_contig5729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=675bp|location=Sequence derived from alignment at P-wetherbeei_contig5729:2..676- (Phaeothamnion wetherbeei SAG_119_79)back to top |