mRNA_P-wetherbeei_contig57288.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57288.1.1
Unique NamemRNA_P-wetherbeei_contig57288.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A7V9AJZ1_9CHLR (N-acetylmuramoyl-L-alanine amidase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9AJZ1_9CHLR)

HSP 1 Score: 169 bits (427), Expect = 2.450e-48
Identity = 82/134 (61.19%), Postives = 96/134 (71.64%), Query Frame = 1
Query:    7 GALGSVDGLSFVYIDASDGPWAYDVTPQAAPSDGEGDPLVPPKLLTREAWGADDAYRFDG-NVIWPPEYQEVRHVIIHHTETPTEQ-DPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            GA G V GL FVYID SDGPW  D++     +    DPL PP+++TR  WGAD+ +RFD    +WPPEYQ V H+IIHHT T     D   AIR+IYYYHAV QGWGDIGYNYLVD NG IY+GR+GGQNV+GG
Sbjct:  167 GAPGEVAGLRFVYIDPSDGPWDDDISAGGELTSASTDPLAPPEVVTRAEWGADERWRFDTFGEVWPPEYQTVTHIIIHHTATANRPLDVAGAIRAIYYYHAVSQGWGDIGYNYLVDHNGRIYQGRFGGQNVIGG 300          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A7V9VV31_9CHLR (SH3 domain-containing protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VV31_9CHLR)

HSP 1 Score: 165 bits (417), Expect = 4.310e-45
Identity = 81/135 (60.00%), Postives = 99/135 (73.33%), Query Frame = 1
Query:   16 GSVDGLSFVYIDASDGPWAYDVTPQAAPSDGEG----DPLVPPKLLTREAWGADDAYRF-DGNVIWPPEYQEVRHVIIHHTETPTEQ-DPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            G VDGLSFVYID +DGPW  D+ P  A S+  G    D L PP+++TRE WGA++ +RF D   +WPPEY  V H+IIHHT T  +  D   AIR+IYYYHA+EQ WGDIGYNYLVD NG IY+GR+GGQ+V+GG
Sbjct:  133 GVVDGLSFVYIDPTDGPWDQDIVPAPAESESIGILSTDTLAPPEIVTREQWGANEDWRFNDIGEVWPPEYSTVSHIIIHHTATVNQPFDVPNAIRAIYYYHAIEQAWGDIGYNYLVDHNGRIYQGRFGGQDVIGG 267          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A7V9VH76_9CHLR (SH3 domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VH76_9CHLR)

HSP 1 Score: 164 bits (416), Expect = 7.880e-45
Identity = 83/142 (58.45%), Postives = 97/142 (68.31%), Query Frame = 1
Query:    4 NGALGSVDGLSFVYIDASDGPWAYDVTPQAAPSDGE--------GDPLVPPKLLTREAWGADDAYRFDG-NVIWPPEYQEVRHVIIHHTETPTEQDPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            +G  G V+GL FVYIDA+DGPW +D+      S G         GD   PP+++TR  WGA++ +RF     IWPP YQ V H+IIHHT TP  QD   AIRSIYYYHAV Q WGDIGYNYLV R+G IYEGRYGGQNV+GG
Sbjct:  160 DGNPGVVEGLEFVYIDATDGPWEHDLVTATTRSVGASSQDLAPVGDNRTPPEIITRAQWGANEDFRFASYGEIWPPTYQTVSHIIIHHTATPNSQDIPTAIRSIYYYHAVIQEWGDIGYNYLVGRDGRIYEGRYGGQNVIGG 301          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A7V8X535_9CHLR (SH3 domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V8X535_9CHLR)

HSP 1 Score: 162 bits (411), Expect = 2.060e-44
Identity = 81/142 (57.04%), Postives = 97/142 (68.31%), Query Frame = 1
Query:    4 NGALGSVDGLSFVYIDASDGPWAYDVTPQAAPSDGE--------GDPLVPPKLLTREAWGADDAYRFDG-NVIWPPEYQEVRHVIIHHTETPTEQDPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            +G  G VDGL FVYIDA+DGPW  D+      S G         GD  +PP+++TR  WGA++ +RF     IWPP Y+ V H+IIHHT TP  QD   AIRSIY+YHA+ Q WGDIGYNYLV R+G IYEGRYGGQNV+GG
Sbjct:  160 DGDPGVVDGLEFVYIDATDGPWENDLVAATTRSVGASSQELVPVGDNRIPPEIITRAQWGANEDFRFASYGEIWPPTYETVSHIIIHHTATPNSQDIPTAIRSIYFYHAIIQEWGDIGYNYLVGRDGRIYEGRYGGQNVIGG 301          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A7W0PQ95_9CHLR (SH3 domain-containing protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0PQ95_9CHLR)

HSP 1 Score: 157 bits (398), Expect = 3.310e-42
Identity = 78/133 (58.65%), Postives = 98/133 (73.68%), Query Frame = 1
Query:   16 GSVDGLSFVYIDASDGPWAYDVTPQAAP--SDGEGDPLVPPKLLTREAWGADDAYRFDG-NVIWPPEYQEVRHVIIHHTETPTEQ-DPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            G VDGL+FVYID +DGPW  D+   ++   S    D + PP+++TR  WGA++++RFD    IWPPEY+ V H+I+HHT T     D   AIRSIYYYHAVEQGWGDIGYNYLVD NG IY+GR+GGQ+V+GG
Sbjct:  176 GEVDGLAFVYIDPTDGPWEEDLAVGSSSRLSTLATDTIAPPEIITRAQWGANESWRFDTFGEIWPPEYEPVTHLILHHTATANRPADVPNAIRSIYYYHAVEQGWGDIGYNYLVDHNGRIYQGRFGGQDVIGG 308          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A6J4U8T4_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=uncultured Thermomicrobiales bacterium TaxID=1645740 RepID=A0A6J4U8T4_9CHLR)

HSP 1 Score: 153 bits (386), Expect = 9.770e-41
Identity = 79/135 (58.52%), Postives = 96/135 (71.11%), Query Frame = 1
Query:    4 NGALGSVDGLSFVYIDASDGPWAYDVTPQA-APSDGEGDPLVPPKLLTREAWGADDAYRFDGN-VIWPPEYQEVRHVIIHHTETPTEQDPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            +G   +V G +  YIDAS GP    V   A APS      +  P +++R AWGA++AYR+D N  IWPPEY+ V HVIIHHTET   QDPL+A+RSIYYYHAV +GWGDIGYNYLVD  G +YEGR GG+NV+GG
Sbjct:  149 DGQPAAVAGFAMTYIDASPGPSVDMVFAAALAPS------VARPPIISRAAWGANEAYRYDQNGEIWPPEYRTVEHVIIHHTETTNFQDPLIALRSIYYYHAVTRGWGDIGYNYLVDYMGNVYEGRVGGENVIGG 277          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A7W0QQ64_9CHLR (N-acetylmuramoyl-L-alanine amidase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0QQ64_9CHLR)

HSP 1 Score: 149 bits (376), Expect = 2.210e-40
Identity = 75/133 (56.39%), Postives = 93/133 (69.92%), Query Frame = 1
Query:   16 GSVDGLSFVYIDASDGPWAYDVTPQAAP--SDGEGDPLVPPKLLTREAWGADDAYRFDGN-VIWPPEYQEVRHVIIHHTETPTEQ-DPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            G V+GL F YID +DGPW  D+   ++   S    D + PP ++TR  WGA++ +RF  +  IW PEY+ V H+IIHHT T     D   AIRSIYYYHAVEQGWGDIGYNYLVD NG IY+GR+GGQ+V+GG
Sbjct:  175 GRVEGLEFTYIDPTDGPWEADIATGSSSRLSTLAVDTIAPPPIVTRAQWGANENWRFGSSGEIWSPEYETVSHIIIHHTATANRPADVPNAIRSIYYYHAVEQGWGDIGYNYLVDHNGRIYQGRFGGQDVIGG 307          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A7W0A138_9CHLR (SH3 domain-containing protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0A138_9CHLR)

HSP 1 Score: 151 bits (382), Expect = 4.120e-40
Identity = 79/135 (58.52%), Postives = 93/135 (68.89%), Query Frame = 1
Query:    4 NGALGSVDGLSFVYIDASDGPWAYDVTPQAA-PSDGEGDPLVPPKLLTREAWGADDAYRFDGN-VIWPPEYQEVRHVIIHHTETPTEQDPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            NG   +V G S  YIDAS GP    V   A  PS      +  P +++R AWGA++AYR+D    IW PEYQ V HVIIHHTET   QDPL+A+RSIYYYHAV +GWGDIGYNYLVD  G +YEGR GG+NV+GG
Sbjct:  149 NGQPAAVAGFSITYIDASPGPAVETVYAAALEPS------VARPPIISRAAWGANEAYRYDATGEIWTPEYQTVEHVIIHHTETTNFQDPLIALRSIYYYHAVTRGWGDIGYNYLVDYLGNVYEGRAGGENVIGG 277          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A838GCT2_9CHLR (N-acetylmuramoyl-L-alanine amidase (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838GCT2_9CHLR)

HSP 1 Score: 149 bits (376), Expect = 2.310e-39
Identity = 75/133 (56.39%), Postives = 93/133 (69.92%), Query Frame = 1
Query:   16 GSVDGLSFVYIDASDGPWAYDVTPQAAP--SDGEGDPLVPPKLLTREAWGADDAYRFDGN-VIWPPEYQEVRHVIIHHTETPTEQ-DPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            G V+GL F YID +DGPW  D+   ++   S    D + PP ++TR  WGA++ +RF  +  IW PEY+ V H+IIHHT T     D   AIRSIYYYHAVEQGWGDIGYNYLVD NG IY+GR+GGQ+V+GG
Sbjct:  175 GRVEGLEFTYIDPTDGPWEADIATGSSSRLSTLAVDTVAPPPIITRAQWGANENWRFGSSGEIWSPEYETVSHIIIHHTATANRPADVPNAIRSIYYYHAVEQGWGDIGYNYLVDHNGRIYQGRFGGQDVIGG 307          
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Match: A0A7V9AJW2_9CHLR (SH3 domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9AJW2_9CHLR)

HSP 1 Score: 146 bits (369), Expect = 3.480e-38
Identity = 74/135 (54.81%), Postives = 91/135 (67.41%), Query Frame = 1
Query:    4 NGALGSVDGLSFVYIDASDGPWAYDVTPQAAPSDGEGDPLVPPKLLTREAWGADDAYRFD--GNVIWPPEYQEVRHVIIHHTETPTEQDPLVAIRSIYYYHAVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG 402
            NG    + GLSF YIDA+ GP   D+      +   G P+ PP ++TR+ WGA+ AY     G   W P YQ VRHVIIHH+ETP  +DP+  IRSI+YYHAV +GWGDIGYNYLVD  G +YEGR GG+NV+GG
Sbjct:  127 NGTEIVIPGLSFTYIDATGGPTLGDIV-----ASSPGSPVSPPPIITRQEWGAELAYGGSDRGAQEWTPAYQTVRHVIIHHSETPNFRDPVAEIRSIHYYHAVTRGWGDIGYNYLVDYLGNVYEGRTGGENVIGG 256          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57288.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7V9AJZ1_9CHLR2.450e-4861.19N-acetylmuramoyl-L-alanine amidase (Fragment) n=1 ... [more]
A0A7V9VV31_9CHLR4.310e-4560.00SH3 domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A7V9VH76_9CHLR7.880e-4558.45SH3 domain-containing protein n=1 Tax=Chloroflexia... [more]
A0A7V8X535_9CHLR2.060e-4457.04SH3 domain-containing protein n=1 Tax=Chloroflexia... [more]
A0A7W0PQ95_9CHLR3.310e-4258.65SH3 domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A6J4U8T4_9CHLR9.770e-4158.52Uncharacterized protein (Fragment) n=1 Tax=uncultu... [more]
A0A7W0QQ64_9CHLR2.210e-4056.39N-acetylmuramoyl-L-alanine amidase (Fragment) n=1 ... [more]
A0A7W0A138_9CHLR4.120e-4058.52SH3 domain-containing protein (Fragment) n=1 Tax=C... [more]
A0A838GCT2_9CHLR2.310e-3956.39N-acetylmuramoyl-L-alanine amidase (Fragment) n=1 ... [more]
A0A7V9AJW2_9CHLR3.480e-3854.81SH3 domain-containing protein n=1 Tax=Chloroflexia... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57288contigP-wetherbeei_contig57288:111..512 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog525904.Tter_0009
PFAMsCW_binding_2,PA,Peptidase_S8,SH3_3,SpoIID,fn3_5
Model size402
Max annot lvl2|Bacteria
KEGG koko:K01361
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.05e-29
EggNOG OGsCOG3103@1|root,COG3103@2|Bacteria
EC3.4.21.96
DescriptionSh3 type 3 domain protein
Cds size402
COG categoryT
BRITEko00000,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186849.8301904-CDS-P-wetherbeei_contig57288:110..5121683186849.8301904-CDS-P-wetherbeei_contig57288:110..512Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57288 111..512 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57288.1.1prot_P-wetherbeei_contig57288.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57288 111..512 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57288.1.1

>prot_P-wetherbeei_contig57288.1.1 ID=prot_P-wetherbeei_contig57288.1.1|Name=mRNA_P-wetherbeei_contig57288.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp
VNGALGSVDGLSFVYIDASDGPWAYDVTPQAAPSDGEGDPLVPPKLLTRE
AWGADDAYRFDGNVIWPPEYQEVRHVIIHHTETPTEQDPLVAIRSIYYYH
AVEQGWGDIGYNYLVDRNGTIYEGRYGGQNVVGG
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mRNA from alignment at P-wetherbeei_contig57288:111..512+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57288.1.1 ID=mRNA_P-wetherbeei_contig57288.1.1|Name=mRNA_P-wetherbeei_contig57288.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig57288:111..512+ (Phaeothamnion wetherbeei SAG_119_79)
GTGAACGGCGCCCTCGGCTCGGTGGACGGCCTCTCCTTCGTCTACATCGA CGCCTCGGACGGCCCGTGGGCATACGACGTGACGCCGCAGGCGGCCCCAT CCGACGGCGAGGGGGATCCCCTCGTGCCCCCGAAGCTCCTGACGCGCGAG GCGTGGGGCGCCGACGACGCCTATCGCTTCGACGGCAACGTGATCTGGCC GCCGGAGTACCAGGAGGTCCGCCACGTCATCATCCACCACACCGAGACGC CGACCGAGCAGGACCCGCTGGTGGCGATCCGGTCGATCTACTACTACCAC GCGGTGGAGCAGGGCTGGGGAGACATCGGCTACAACTACCTGGTGGACCG CAACGGGACGATCTACGAGGGCCGGTACGGCGGGCAGAACGTCGTCGGTG GG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57288:111..512+

>mRNA_P-wetherbeei_contig57288.1.1 ID=mRNA_P-wetherbeei_contig57288.1.1|Name=mRNA_P-wetherbeei_contig57288.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig57288:111..512+ (Phaeothamnion wetherbeei SAG_119_79)
GTGAACGGCGCCCTCGGCTCGGTGGACGGCCTCTCCTTCGTCTACATCGA
CGCCTCGGACGGCCCGTGGGCATACGACGTGACGCCGCAGGCGGCCCCAT
CCGACGGCGAGGGGGATCCCCTCGTGCCCCCGAAGCTCCTGACGCGCGAG
GCGTGGGGCGCCGACGACGCCTATCGCTTCGACGGCAACGTGATCTGGCC
GCCGGAGTACCAGGAGGTCCGCCACGTCATCATCCACCACACCGAGACGC
CGACCGAGCAGGACCCGCTGGTGGCGATCCGGTCGATCTACTACTACCAC
GCGGTGGAGCAGGGCTGGGGAGACATCGGCTACAACTACCTGGTGGACCG
CAACGGGACGATCTACGAGGGCCGGTACGGCGGGCAGAACGTCGTCGGTG
GG
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