mRNA_P-wetherbeei_contig57279.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: A0A2P1VJS0_9BURK (Enoyl-CoA hydratase/isomerase family protein n=2 Tax=Variovorax TaxID=34072 RepID=A0A2P1VJS0_9BURK) HSP 1 Score: 156 bits (395), Expect = 4.230e-45 Identity = 84/131 (64.12%), Postives = 108/131 (82.44%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWPAGDAGS 393
RIGL+PD GA YTLPR+VG+ RA+E+++SAREI AAEAR LG+ +E+ + LMPRAL++A + A ASP+A+S++K AL SSLGSDL TML+IEAAGQ +A S+YAKE+ RRFA+REPA+F WPA AGS
Sbjct: 136 RIGLVPDMGAYYTLPRVVGLQRAKELIFSAREIDAAEARQLGIAMEVLPAENLMPRALAIARSFAGASPVAMSVSKRALQSSLGSDLPTMLEIEAAGQALASNSEYAKEAVRRFASREPAQFRWPA--AGS 264
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: UPI0019CB3091 (Enoyl-CoA hydratase/isomerase family protein n=1 Tax=Rhodoferax sp. TaxID=50421 RepID=UPI0019CB3091) HSP 1 Score: 152 bits (385), Expect = 1.040e-43 Identity = 80/119 (67.23%), Postives = 102/119 (85.71%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREP 357
RIGL+PDYGALYTLPR VG+ RA+EIM+SAREIGAAEARDLGLVLE+ DAL+PRA+++A L ASP AL++TK AL+ SL S L ++L++EAAGQG+AG+S YAK++FRRFA ++P
Sbjct: 136 RIGLVPDYGALYTLPRAVGVQRAKEIMFSAREIGAAEARDLGLVLEVLAPDALLPRAIAMARTLVHASPTALAMTKEALNGSLNSSLDSLLELEAAGQGVAGSSAYAKDAFRRFANKQP 254
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: A0A519ZAI2_9BURK (Enoyl-CoA hydratase/isomerase family protein (Fragment) n=1 Tax=Rubrivivax sp. TaxID=50259 RepID=A0A519ZAI2_9BURK) HSP 1 Score: 145 bits (367), Expect = 6.820e-42 Identity = 78/125 (62.40%), Postives = 99/125 (79.20%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWP 375
RIGL+PD+GALYTLPRIVG+ RA+E+MYSAREI EA ++G+ LE+ L+PRA +LA +L AS A+S+TK AL++SLGSDLATML++EA GQ IA +SDY KES RRF A+EP +F WP
Sbjct: 44 RIGLVPDFGALYTLPRIVGLQRAKELMYSAREIVPQEALNMGIALEVLPAGELLPRAQALARSLCGASDAAMSVTKQALNASLGSDLATMLEMEATGQAIAASSDYLKESARRFVAKEPPQFRWP 168
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: A0A1Y2R419_9BURK (Enoyl-CoA hydratase n=1 Tax=Hydrogenophaga sp. IBVHS1 TaxID=1985169 RepID=A0A1Y2R419_9BURK) HSP 1 Score: 146 bits (369), Expect = 4.730e-41 Identity = 78/125 (62.40%), Postives = 98/125 (78.40%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWP 375
RIGL+PD+GALYTLPRIVG+ RA+E+MYSAREIG EA +G+ LE+ L+PRA +LA +L AS A+S+TK AL++SLGSDL TML++EA GQ IA +SDY KES RRF A+EP +F WP
Sbjct: 139 RIGLVPDFGALYTLPRIVGLQRAKELMYSAREIGPQEALSMGIALEVLPAGELLPRAQALAQSLCGASDAAMSVTKQALNASLGSDLTTMLEMEANGQAIAASSDYLKESARRFVAKEPPQFRWP 263
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: A0A679JLW3_VARPD (Short-chain-enoyl-CoA hydratase n=1 Tax=Variovorax paradoxus TaxID=34073 RepID=A0A679JLW3_VARPD) HSP 1 Score: 145 bits (365), Expect = 1.390e-40 Identity = 78/129 (60.47%), Postives = 99/129 (76.74%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWPAGDA 387
RIGLIPD A YTLPR+VG+ RA+E+++SARE+ AAEA LG+ +E+ VDAL+PRA ++A + A ASPLA+ ++K AL SLG DL +LDIEA GQ A SDYAKE+ RRFAAREPA+F WPA +
Sbjct: 136 RIGLIPDMAAHYTLPRVVGLQRAKELIFSAREVDAAEALRLGIAMEVLPVDALLPRAQAIAGSFAGASPLAMGVSKRALQGSLGHDLQAVLDIEADGQATASGSDYAKEAVRRFAAREPAQFRWPAASS 264
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: UPI00131E3E4C (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Xenophilus sp. L33 TaxID=1747220 RepID=UPI00131E3E4C) HSP 1 Score: 145 bits (365), Expect = 2.140e-40 Identity = 77/125 (61.60%), Postives = 102/125 (81.60%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWP 375
RIGL+PD GA +TLPR VG+ RA+E+++SAREIGAAEA+ +G+ LE+ DAL+ RA +A + A+ +ALSL+K AL++SL SDLAT+LD+EAAGQGIAG+SDY KE+ RRF A+EPA+F WP
Sbjct: 142 RIGLVPDCGAFFTLPRAVGLQRAKELIFSAREIGAAEAQGMGIALEVLPPDALLARAQDMARSFCGANGVALSLSKQALNASLQSDLATVLDMEAAGQGIAGSSDYLKEAARRFVAKEPAQFRWP 266
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: A0A7V8JZ25_9BURK (1,2-epoxyphenylacetyl-CoA isomerase n=4 Tax=unclassified Variovorax TaxID=663243 RepID=A0A7V8JZ25_9BURK) HSP 1 Score: 144 bits (363), Expect = 2.700e-40 Identity = 75/125 (60.00%), Postives = 99/125 (79.20%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWP 375
RIGL+PD GA YTLPR+VG+ RA+E+++SAREI A EA LGL +E+ +AL RA ++A + A ASP+A+S+ K AL +SLGSDL T+L+IE++GQ +A SDYAKE+ RRFAAREPA+F WP
Sbjct: 136 RIGLVPDMGAFYTLPRVVGLQRAKELIFSAREIDATEALHLGLAMEVVPAEALAARAQAIARSFAGASPVAMSIAKRALQASLGSDLQTLLEIESSGQALASNSDYAKEAVRRFAAREPAQFRWP 260
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: A0A0Q7LRU4_9BURK (Enoyl-CoA hydratase n=1 Tax=Variovorax sp. Root473 TaxID=1736541 RepID=A0A0Q7LRU4_9BURK) HSP 1 Score: 144 bits (362), Expect = 4.690e-40 Identity = 79/126 (62.70%), Postives = 98/126 (77.78%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWPA 378
RIGL+PD GA YTLPR+VG+ RA+E++YSARE GA EA + L LE+ + L+ RAL +A +L ASPLALSL+K AL +SL SDL TMLD+EA GQ +AG SDYA+ES RRFA+REPA+F W A
Sbjct: 137 RIGLVPDVGAWYTLPRVVGLQRAKELVYSAREFGAHEALRMNLALEVHAPEQLLARALEIAHSLEGASPLALSLSKQALHASLQSDLTTMLDMEATGQAMAGASDYARESIRRFASREPAQFRWAA 262
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: A0A1H7ESP0_9BURK (2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA isomerase n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A1H7ESP0_9BURK) HSP 1 Score: 143 bits (360), Expect = 7.820e-40 Identity = 76/129 (58.91%), Postives = 100/129 (77.52%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWPAGDA 387
RIGLIPD A YTLPR+VG+ RA+E+++SARE+ AAEA LG+ +E+ V AL+PRA ++A + A ASP+A+ L+K AL SL +DL T+LD+EA GQ +A SDYAKE+ RRFAAREPA+F WPA +
Sbjct: 136 RIGLIPDMAAHYTLPRVVGLQRAKELIFSAREVDAAEALRLGIAMEVLPVQALLPRAQAIARSFAGASPVAMGLSKRALRDSLANDLQTLLDVEADGQALASGSDYAKEAVRRFAAREPAQFRWPAASS 264
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Match: A0A3A4RCJ9_9BURK (Enoyl-CoA hydratase/isomerase family protein n=2 Tax=Burkholderiales TaxID=80840 RepID=A0A3A4RCJ9_9BURK) HSP 1 Score: 140 bits (354), Expect = 7.630e-39 Identity = 77/125 (61.60%), Postives = 95/125 (76.00%), Query Frame = 1
Query: 1 RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVDALMPRALSLAAALATASPLALSLTKSALDSSLGSDLATMLDIEAAGQGIAGTSDYAKESFRRFAAREPARFVWP 375
RIGL+PD G+ YTLPR+VG+ RA+E++YSARE GAAEA +GL LEI L+PRA+ +A + A A+SL+K AL +SL SDL TMLD+EA Q IAG SDYA+ES RRFAAREPA+F WP
Sbjct: 137 RIGLVPDIGSWYTLPRVVGLQRAKELVYSAREFGAAEALQMGLALEILPSAELLPRAMEMARSFEGAPATAMSLSKQALQASLQSDLNTMLDMEATAQAIAGGSDYARESVRRFAAREPAQFRWP 261 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57279.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57279.1.1 >prot_P-wetherbeei_contig57279.1.1 ID=prot_P-wetherbeei_contig57279.1.1|Name=mRNA_P-wetherbeei_contig57279.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=134bp RIGLIPDYGALYTLPRIVGIARAREIMYSAREIGAAEARDLGLVLEIAEVback to top mRNA from alignment at P-wetherbeei_contig57279:1..402+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57279.1.1 ID=mRNA_P-wetherbeei_contig57279.1.1|Name=mRNA_P-wetherbeei_contig57279.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig57279:1..402+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57279:1..402+ >mRNA_P-wetherbeei_contig57279.1.1 ID=mRNA_P-wetherbeei_contig57279.1.1|Name=mRNA_P-wetherbeei_contig57279.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=402bp|location=Sequence derived from alignment at P-wetherbeei_contig57279:1..402+ (Phaeothamnion wetherbeei SAG_119_79)back to top |