mRNA_P-wetherbeei_contig57270.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig57270.1.1
Unique NamemRNA_P-wetherbeei_contig57270.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57270.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig57270contigP-wetherbeei_contig57270:21..485 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog288000.BBta_0863
PFAMsMetallophos
Model size465
Max annot lvl1224|Proteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.72e-17
EggNOG OGsCOG1409@1|root,COG1409@2|Bacteria,1NNNR@1224|Proteobacteria
DescriptionCalcineurin-like phosphoesterase
Cds size456
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186849.5416543-UTR-P-wetherbeei_contig57270:20..291683186849.5416543-UTR-P-wetherbeei_contig57270:20..29Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig57270 21..29 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186849.5532064-CDS-P-wetherbeei_contig57270:29..4851683186849.5532064-CDS-P-wetherbeei_contig57270:29..485Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig57270 30..485 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig57270.1.1prot_P-wetherbeei_contig57270.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig57270 30..485 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig57270.1.1

>prot_P-wetherbeei_contig57270.1.1 ID=prot_P-wetherbeei_contig57270.1.1|Name=mRNA_P-wetherbeei_contig57270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=152bp
MQREEARNLTFDAATSIWTLHIEYPMPGFAYQLRWPVPNPTAHQSIREST
TENQKLLLELRDRAVAGALAESDKQALQELDAFVARLIKAIGKPARRECH
QAYWLAYDAEQCQLRCLHAYPPQDLSDPRFDTPLGRGVGGAAFLRRQHEG
WR
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mRNA from alignment at P-wetherbeei_contig57270:21..485+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig57270.1.1 ID=mRNA_P-wetherbeei_contig57270.1.1|Name=mRNA_P-wetherbeei_contig57270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=465bp|location=Sequence derived from alignment at P-wetherbeei_contig57270:21..485+ (Phaeothamnion wetherbeei SAG_119_79)
GACGATGCGATGCAAAGGGAAGAGGCTCGCAACCTCACCTTTGACGCCGC
CACCTCGATCTGGACGCTCCACATCGAGTATCCGATGCCCGGATTTGCTT
ACCAGCTGAGGTGGCCGGTTCCCAATCCAACGGCGCACCAGTCGATACGC
GAAAGCACAACCGAGAACCAGAAGCTCCTTCTCGAACTCCGTGACCGGGC
CGTCGCGGGTGCGCTGGCGGAATCGGACAAGCAGGCGTTGCAGGAACTGG
ACGCGTTTGTCGCCCGTTTGATCAAAGCCATCGGAAAACCGGCGAGGCGA
GAATGCCATCAAGCCTACTGGTTGGCGTACGACGCGGAGCAGTGTCAACT
ACGATGCCTCCACGCCTATCCGCCACAGGATCTAAGCGACCCGCGCTTTG
ACACGCCGCTCGGCCGTGGCGTCGGTGGCGCGGCGTTCTTGAGACGTCAG
CACGAAGGTTGGAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig57270:21..485+

>mRNA_P-wetherbeei_contig57270.1.1 ID=mRNA_P-wetherbeei_contig57270.1.1|Name=mRNA_P-wetherbeei_contig57270.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=456bp|location=Sequence derived from alignment at P-wetherbeei_contig57270:21..485+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAAGGGAAGAGGCTCGCAACCTCACCTTTGACGCCGCCACCTCGAT
CTGGACGCTCCACATCGAGTATCCGATGCCCGGATTTGCTTACCAGCTGA
GGTGGCCGGTTCCCAATCCAACGGCGCACCAGTCGATACGCGAAAGCACA
ACCGAGAACCAGAAGCTCCTTCTCGAACTCCGTGACCGGGCCGTCGCGGG
TGCGCTGGCGGAATCGGACAAGCAGGCGTTGCAGGAACTGGACGCGTTTG
TCGCCCGTTTGATCAAAGCCATCGGAAAACCGGCGAGGCGAGAATGCCAT
CAAGCCTACTGGTTGGCGTACGACGCGGAGCAGTGTCAACTACGATGCCT
CCACGCCTATCCGCCACAGGATCTAAGCGACCCGCGCTTTGACACGCCGC
TCGGCCGTGGCGTCGGTGGCGCGGCGTTCTTGAGACGTCAGCACGAAGGT
TGGAGG
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