mRNA_P-wetherbeei_contig5722.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5722.1.1
Unique NamemRNA_P-wetherbeei_contig5722.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: D8LSK6_ECTSI (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK6_ECTSI)

HSP 1 Score: 315 bits (808), Expect = 1.110e-102
Identity = 164/264 (62.12%), Postives = 201/264 (76.14%), Query Frame = 3
Query:  168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            L EGE+L  + RA+AEKGD   AKS L+QLK++MT+F SLPP+G   P A +ER LAR ++EVAV +SAREGD+  FQRHMAQLKP  M+  SQLPP+P +  +LGLNLLFLLVENRLAEFHSELEL+ DAERA  C+ FP +LEQFLMVGSYDQVL AR  +PHEY  +FL SL  TVR+ IAECSE AY+ LS+A AQ++L++D   +L+ F+   +PEW +  D+I+F+ A     K  EIPSMRLI E LSYATELERIV
Sbjct:    4 LAEGEQLFASFRASAEKGDIQKAKSLLTQLKILMTTFDSLPPMGAEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPLCMDFVSQLPPSPNQSAVLGLNLLFLLVENRLAEFHSELELMGDAERASECVMFPVRLEQFLMVGSYDQVLAARDHVPHEYYKYFLESLLGTVRDGIAECSEAAYSELSIAEAQKMLRMDQRSELEAFVADKYPEWELTADKIIFK-APEACKKSAEIPSMRLIAECLSYATELERIV 266          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A836CF55_9STRA (SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF55_9STRA)

HSP 1 Score: 300 bits (767), Expect = 2.170e-96
Identity = 157/274 (57.30%), Postives = 205/274 (74.82%), Query Frame = 3
Query:  147 MAPTQQGLQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYME--LGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQ-LQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            MAP Q GL +G  LL +L+ +AE GD   A +TLSQLK+++ +F SLPP G  + TA+ ER LAR +LEVAV MSAR+GD     RHMAQLKPYY++  L + LP +  R+P+LGLNL+FLLVEN+LA+FHSELEL++D +R++ C+ FP +LEQ+LMVGSY+QVL A+  +PH+Y ++ L +L  TVREAIA+C  TAY S+SV  AQ +L L    Q L+ F+ T HPEW+I  D++VFQ AA    K+ EIPSMR+ITE+LSYATELERIV
Sbjct:    1 MAPVQDGLSQGSALLQSLKKSAEAGDMQAANATLSQLKLVLINFPSLPPGGEESATAKAERTLAREVLEVAVFMSARQGDKKALARHMAQLKPYYLDGQLATSLPDSSNRLPLLGLNLIFLLVENKLADFHSELELMSDEDRSNECVMFPIRLEQYLMVGSYNQVLAAKDHVPHQYYSYLLSNLVDTVREAIADCMSTAYDSMSVKDAQTMLMLPASAQELKNFVATFHPEWKIFDDKVVFQHAAATK-KMQEIPSMRVITETLSYATELERIV 273          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A7S2V1Z7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z7_9STRA)

HSP 1 Score: 254 bits (649), Expect = 2.460e-78
Identity = 139/278 (50.00%), Postives = 189/278 (67.99%), Query Frame = 3
Query:  129 LKSAQTMAPTQQGLQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYM-ELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            L   +TMA  Q+ L EG ++L  ++   + G  + A + L+QLK++MT    LPP  T + T+++ER  AR +LE AV++S R+   +GF RH+AQLKPYY   L  +LP +P R+P+LGL+LLFLL ENRLAEFHSELELL + ERAD  + FP +L+QFL VGSYDQVL+A+ S+PH Y  +F+ S+   VREA+AEC+  AY +L++A+A  LL+LDG      F +    EW + GD I F      + +  +IPSMRLI+ESL YATELERIV
Sbjct:   21 LPHRKTMAEIQRVLDEGNKILSQMKIDIDGGSLSQASTKLTQLKILMTKLPGLPPCTTDSSTSKKEREFARGVLEQAVLLSTRDEGKSGFPRHLAQLKPYYFGALHRELPASPLRLPVLGLHLLFLLTENRLAEFHSELELLAEEERADPHVRFPIELDQFLAVGSYDQVLEAKASVPHPYYAYFMDSIVDAVREAVAECTAAAYETLALASAATLLRLDGASAAAAFAQGR--EWDVRGDTIYFPRPE-TSKRASDIPSMRLISESLLYATELERIV 295          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A4D9D7E3_9STRA (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7E3_9STRA)

HSP 1 Score: 253 bits (646), Expect = 2.910e-78
Identity = 134/266 (50.38%), Postives = 183/266 (68.80%), Query Frame = 3
Query:  168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVF--QEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            L++G++L+  L++A E      A S L  LKV++T+F SLPP+   +P A +E  L R +LE AV ++ ++ D   FQR MAQLKPYY + G  L  +  RMPILGLNLLFLLVENRLAEFHSELE L++AERA+  +SFP  +EQ LMVGSY +VL+AR   PH    FF+  L  TVR+A+A+CSE AY  L + AA+E+L L+    L ++    HP+W+++GD  V+  ++   K  K  ++PS+RLI+E+LSYATELERIV
Sbjct:    3 LEQGKKLVIKLQSAVESDHLGEAASLLGDLKVLLTNFESLPPMNQPSPHASEECALGRQVLEQAVFLAVKQRDKIAFQRQMAQLKPYYQDKGRGLTDSALRMPILGLNLLFLLVENRLAEFHSELEHLSEAERANVYVSFPILVEQQLMVGSYHKVLEARTRTPHPGYAFFMSLLVDTVRDAVADCSEAAYERLGIGAAKEILLLESDTALAEYAAVKHPDWKVDGDGFVYFGKDHGPKQAKASDVPSLRLISETLSYATELERIV 268          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: UPI0007EFE15A (26S proteasome non-ATPase regulatory subunit 8 homolog A n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFE15A)

HSP 1 Score: 240 bits (613), Expect = 2.490e-73
Identity = 132/264 (50.00%), Postives = 177/264 (67.05%), Query Frame = 3
Query:  168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            L E  +L +  +AA  +GD  +  + LSQLKV++T FRSLPP+  ATP A  E  +AR I E AVV+S +  D   F+R   QLKP+Y + G +LPP+PQ  PILGLNLL LLV+NR+AEFH+ELELL+ +   + CI    +LEQ  M G+Y++VL AR S+PHE   +FL  L  TVR+ IA CSE AY +LSVA A+++L     R+L ++I   HPEW ++   + FQ+A   A    EIPS++LIT++LSYA ELERIV
Sbjct:    5 LTELSQLFERFKAAMTRGDFDSCSNFLSQLKVMLTGFRSLPPLFEATPNAVHELTIARDIYEHAVVLSVKTEDQDAFERDFFQLKPFYTDAGDRLPPSPQEFPILGLNLLRLLVQNRIAEFHTELELLSASALENPCIRHAVELEQSFMEGAYNRVLSARQSVPHETYVYFLDLLAKTVRDEIAGCSEKAYDTLSVADARQMLLFSTDRELSEYINEEHPEWEMKNGLVTFQKAKESA-PCKEIPSLQLITQTLSYARELERIV 267          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A1U8A4S5_NELNU (26S proteasome non-ATPase regulatory subunit 8 homolog A-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8A4S5_NELNU)

HSP 1 Score: 233 bits (594), Expect = 1.730e-70
Identity = 125/258 (48.45%), Postives = 171/258 (66.28%), Query Frame = 3
Query:  186 LLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            L D  +AA+ + DQ T    LSQLKV++T F+SLPP+   +P A  E  +AR I E AVV+S +  D   F+R   QLKPYY + G +LPP+PQ+ PILGLNLL LLV+NR+AEFH+ELELL+     + CI    +LEQ  M G+Y++VL AR ++PHE   +F+  L  TVR+ IA CSE AY  LS++ A+++L     ++L ++I   HPEW I+   + FQ+A   A    EIPS++LI ++LSYA ELERIV
Sbjct:   11 LFDRFKAASVRNDQDTCTKLLSQLKVLLTGFKSLPPLFEESPDAIYELTIARDIYEHAVVLSVKTEDQDAFERDFFQLKPYYTDAGHRLPPSPQQYPILGLNLLRLLVQNRIAEFHTELELLSATTLENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSISDAKQMLMFSSEQELSEYITEEHPEWEIKNGFVYFQKAKESA-PCKEIPSLQLINQTLSYARELERIV 267          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: C6T763_SOYBN (PCI domain-containing protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C6T763_SOYBN)

HSP 1 Score: 231 bits (589), Expect = 9.660e-70
Identity = 126/264 (47.73%), Postives = 174/264 (65.91%), Query Frame = 3
Query:  168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            L+E  +L D  +A+  + D  T  + LSQLKV++T FRSLPP+   TP A  E  +AR I E AVV+S +  D   F+R   QLKPYY +  ++LPP+PQ  PILGLNLL LLV+NR+AEFH+ELELL+ A   + CI    +LEQ  M G+Y++VL AR ++PH+   +F+  L  TVR+ IA CSE AY  LS+  A+++L     ++L ++I+  HPEW I+   + FQ+A   A    EIPS++LI ++LSYA ELERIV
Sbjct:    5 LKEVSQLFDRFKASFIRNDFDTCSNLLSQLKVLLTGFRSLPPLFADTPNAVHELTIARDIYEHAVVLSVKNEDQDAFERDFFQLKPYYTDACNRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHDTYVYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNGSVFFQKAKESA-PCKEIPSLQLINQTLSYARELERIV 267          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A7N0R9H5_KALFE (PCI domain-containing protein n=3 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0R9H5_KALFE)

HSP 1 Score: 230 bits (587), Expect = 2.180e-69
Identity = 128/264 (48.48%), Postives = 174/264 (65.91%), Query Frame = 3
Query:  168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            L E  +L +  +AA  + D  T ++ LSQLKV++T F+SLPP+   TP A QE   AR I E AVV+S +  D   F+R   QLKPYY ++G +LPP+PQ  PILGLNLL LLV+NR+AEFH+ELELL+ A   + CI    +LEQ  M G+Y++VL AR ++PHE   +F+  L  TVR+ IA CSE AY  L+V  A+++L      +L ++I+  HPEW I+   + FQ+A   A    EIPS++LI ++LSYA ELERIV
Sbjct:    9 LVEVSQLFERFKAAMIRKDFDTCETLLSQLKVMLTEFKSLPPLFETTPNAVQELTTARDIYEHAVVLSVKIEDQEAFERDFFQLKPYYTDVGGRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSPAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLTVNDAKQILLFSSDNELAEYIKEDHPEWEIKNGCVYFQKAKETA-PCKEIPSLQLINQTLSYARELERIV 271          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A059C2K3_EUCGR (PCI domain-containing protein n=6 Tax=rosids TaxID=71275 RepID=A0A059C2K3_EUCGR)

HSP 1 Score: 229 bits (584), Expect = 5.400e-69
Identity = 123/253 (48.62%), Postives = 167/253 (66.01%), Query Frame = 3
Query:  201 RAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            +AA  + D +T  + LSQLKV++T F SLPP+   TP A  E  LAR I E AV++S +  D   F+R   QLKPYY + G  +PP+PQ  PILGLNLL LLV+NR+AEFH+ELELL+ A   + CI    +LEQ  M G+Y++VL AR ++PHE   +F+  L  TVR+ IA CSE AY  LS+  A+++L     ++L ++I+  HPEW I+   + FQ+A   A    EIPS++LI ++LSYA ELERIV
Sbjct:   16 KAALVRNDFSTCTTLLSQLKVLLTEFNSLPPLFEETPNAVHELTLARDIYEHAVILSVKMEDQEAFERDFFQLKPYYTDAGGCIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSIGDARQMLLFSSDQELAEYIKEEHPEWEIKSGSVYFQKAKESAPS-KEIPSLQLINQTLSYARELERIV 267          
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A2J6JPX2_LACSA (PCI domain-containing protein n=9 Tax=Asteraceae TaxID=4210 RepID=A0A2J6JPX2_LACSA)

HSP 1 Score: 229 bits (583), Expect = 7.610e-69
Identity = 126/264 (47.73%), Postives = 173/264 (65.53%), Query Frame = 3
Query:  168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
            L E  +L +  +AA  + D  T    LSQLK+++  F+SLPP+   TP A QE  +AR I E AVV+S +  D   F+R   QLKPYY ++GS+L  +PQ  PILGLNLL LLV+NR+AEFH+ELELL+     + CI    +LEQ  M G+Y++VL AR ++PHE   +F+  L  TVR+ IA CSE AY SL+V  A+E+L +   ++L  +I+  HPEW ++   +VFQ+A   A    EIPS++LI ++LSYA ELERIV
Sbjct:    5 LTEVSQLFERFKAALVRNDFDTCSKLLSQLKILLIEFKSLPPLFEETPNAVQELTIARDIYEHAVVLSVKMEDQDAFERDFFQLKPYYTDVGSRLTQSPQEYPILGLNLLRLLVQNRIAEFHTELELLSANALENTCIKHAVELEQSFMEGAYNRVLTARQTVPHETYVYFMDLLARTVRDEIAGCSEKAYDSLTVKDAREMLLISSDQELFDYIKEEHPEWEVKNGLVVFQKAKESA-PCKEIPSLQLINQTLSYARELERIV 267          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LSK6_ECTSI1.110e-10262.12CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=... [more]
A0A836CF55_9STRA2.170e-9657.30SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-contai... [more]
A0A7S2V1Z7_9STRA2.460e-7850.00Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D7E3_9STRA2.910e-7850.38CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=... [more]
UPI0007EFE15A2.490e-7350.0026S proteasome non-ATPase regulatory subunit 8 hom... [more]
A0A1U8A4S5_NELNU1.730e-7048.4526S proteasome non-ATPase regulatory subunit 8 hom... [more]
C6T763_SOYBN9.660e-7047.73PCI domain-containing protein n=2 Tax=Glycine subg... [more]
A0A7N0R9H5_KALFE2.180e-6948.48PCI domain-containing protein n=3 Tax=Kalanchoe fe... [more]
A0A059C2K3_EUCGR5.400e-6948.62PCI domain-containing protein n=6 Tax=rosids TaxID... [more]
A0A2J6JPX2_LACSA7.610e-6947.73PCI domain-containing protein n=9 Tax=Asteraceae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5722contigP-wetherbeei_contig5722:973..2318 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LSK6
PFAMsCSN8_PSD8_EIF3K
Model size1346
Max annot lvl2759|Eukaryota
KEGG koko:K03031
KEGG Pathwayko03050,ko05169,map03050,map05169
KEGG ModuleM00341
Hectar predicted targeting categoryother localisation
GOsGO:0000502,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0005838,GO:0006508,GO:0006511,GO:0006807,GO:0008150,GO:0008152,GO:0008541,GO:0009056,GO:0009057,GO:0009987,GO:0010498,GO:0016043,GO:0019538,GO:0019941,GO:0022607,GO:0022624,GO:0030163,GO:0032991,GO:0034622,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043248,GO:0043632,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044424,GO:0044444,GO:0044464,GO:0051603,GO:0065003,GO:0071704,GO:0071840,GO:1901564,GO:1901565,GO:1901575,GO:1902494,GO:1905368,GO:1905369
Exons1
Evalue6.16e-106
EggNOG OGsKOG3151@1|root,KOG3151@2759|Eukaryota
Ec32 ortholog description26S proteasome non-ATPase regulatory subunit Rpn12
Ec32 orthologEc-09_001980.1
Descriptionproteasome assembly
Cds size855
COG categoryO
BRITEko00000,ko00001,ko00002,ko03051
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186848.984468-UTR-P-wetherbeei_contig5722:972..10791683186848.984468-UTR-P-wetherbeei_contig5722:972..1079Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5722 973..1079 +
1683186849.009429-UTR-P-wetherbeei_contig5722:1934..23181683186849.009429-UTR-P-wetherbeei_contig5722:1934..2318Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig5722 1935..2318 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186849.0000172-CDS-P-wetherbeei_contig5722:1079..19341683186849.0000172-CDS-P-wetherbeei_contig5722:1079..1934Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5722 1080..1934 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5722.1.1prot_P-wetherbeei_contig5722.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5722 1080..1934 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5722.1.1

>prot_P-wetherbeei_contig5722.1.1 ID=prot_P-wetherbeei_contig5722.1.1|Name=mRNA_P-wetherbeei_contig5722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=285bp
MSKLSARLKSAQTMAPTQQGLQEGERLLDTLRAAAEKGDQATAKSTLSQL
KVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRH
MAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTD
AERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVR
EAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIV
FQEAAGKAGKVPEIPSMRLITESLSYATELERIV*
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mRNA from alignment at P-wetherbeei_contig5722:973..2318+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5722.1.1 ID=mRNA_P-wetherbeei_contig5722.1.1|Name=mRNA_P-wetherbeei_contig5722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1346bp|location=Sequence derived from alignment at P-wetherbeei_contig5722:973..2318+ (Phaeothamnion wetherbeei SAG_119_79)
CAAAACAAAAATCTCCCACCCCCTTCGCGCGTCTGTCGTTCGAAGTCGAG AGATTCTTGTACCTGCCCGAGCTTCCGCTGCAAACCCTCCGGCTTGTCCC GACTCGAATGAGCAAGCTTTCTGCGCGGCTAAAGAGCGCGCAGACCATGG CGCCAACCCAGCAGGGATTACAAGAAGGAGAGAGACTTCTCGATACGCTC AGGGCGGCTGCAGAGAAAGGAGACCAGGCGACGGCGAAGTCAACGCTTTC GCAGTTAAAGGTCATCATGACCAGCTTTCGGTCTCTACCGCCGATTGGGA CCGCCACGCCGACGGCGGAGCAGGAGCGGTGTCTCGCACGAAGCATCTTG GAAGTCGCTGTCGTAATGAGCGCTCGAGAAGGCGACACCACGGGCTTCCA GCGACACATGGCGCAGCTCAAGCCCTACTACATGGAGCTCGGCAGCCAGC TGCCGCCGGCGCCACAGCGGATGCCCATCTTGGGGCTCAACCTGCTGTTT CTCCTCGTTGAGAACCGCCTCGCCGAGTTCCACAGCGAGCTTGAGCTTCT GACGGACGCCGAACGTGCCGACCGCTGCATATCATTCCCGGCACAGCTGG AGCAGTTCCTGATGGTCGGCTCGTACGACCAGGTGCTGCAGGCGCGCTGC AGCATCCCGCACGAGTACTGCAACTTCTTCCTCGGGTCGCTCGACCACAC CGTCCGCGAGGCCATCGCCGAGTGCAGCGAGACGGCCTACGCGTCGCTTT CCGTGGCGGCAGCGCAGGAGCTGCTGAAGCTCGACGGGCTGCGGCAACTG CAGCAGTTCATTGAGACGAGCCACCCTGAGTGGCGGATAGAGGGCGACCG TATCGTATTCCAGGAGGCGGCTGGCAAGGCCGGCAAGGTACCTGAAATCC CCTCCATGCGTCTCATCACCGAGAGCTTATCGTACGCCACGGAGCTGGAG CGCATCGTATGAGGGCAGGTGCAAGGGTGGGTGCTGGCGTTGGCGGGCAA GCGGGCTGGCAGCACATAGGAATCATAGGGAGCGCGGGCTGGCAGTCGCC GCTGGTTGGCGGGAGTGCTGGCTGACCGCCGGTAAGGAGGGGCTGGCCGC GGAGCGCGCTGCTGGATCCGGACAAGACGCCGCGGCCTTTTAAGGCCCCC AGGAAATGTTCGGATGGGGATGCGGCCTTTCGAATGGCCGTCCTGGCGGC GGACATTCTGCCTGCCATTGCGGCGGAGATGCGCCGTGATGCAGGCAGGA TCTGCTCTGCCGTCGCCGTCGATTTCTGCACCAATCACGTGCCCCATGCG GCCGGCGTGTACGGCACAAATGTAAGGATTCTCGCTATCTTTGTGT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5722:973..2318+

>mRNA_P-wetherbeei_contig5722.1.1 ID=mRNA_P-wetherbeei_contig5722.1.1|Name=mRNA_P-wetherbeei_contig5722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=855bp|location=Sequence derived from alignment at P-wetherbeei_contig5722:973..2318+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGCAAGCTTTCTGCGCGGCTAAAGAGCGCGCAGACCATGGCGCCAAC
CCAGCAGGGATTACAAGAAGGAGAGAGACTTCTCGATACGCTCAGGGCGG
CTGCAGAGAAAGGAGACCAGGCGACGGCGAAGTCAACGCTTTCGCAGTTA
AAGGTCATCATGACCAGCTTTCGGTCTCTACCGCCGATTGGGACCGCCAC
GCCGACGGCGGAGCAGGAGCGGTGTCTCGCACGAAGCATCTTGGAAGTCG
CTGTCGTAATGAGCGCTCGAGAAGGCGACACCACGGGCTTCCAGCGACAC
ATGGCGCAGCTCAAGCCCTACTACATGGAGCTCGGCAGCCAGCTGCCGCC
GGCGCCACAGCGGATGCCCATCTTGGGGCTCAACCTGCTGTTTCTCCTCG
TTGAGAACCGCCTCGCCGAGTTCCACAGCGAGCTTGAGCTTCTGACGGAC
GCCGAACGTGCCGACCGCTGCATATCATTCCCGGCACAGCTGGAGCAGTT
CCTGATGGTCGGCTCGTACGACCAGGTGCTGCAGGCGCGCTGCAGCATCC
CGCACGAGTACTGCAACTTCTTCCTCGGGTCGCTCGACCACACCGTCCGC
GAGGCCATCGCCGAGTGCAGCGAGACGGCCTACGCGTCGCTTTCCGTGGC
GGCAGCGCAGGAGCTGCTGAAGCTCGACGGGCTGCGGCAACTGCAGCAGT
TCATTGAGACGAGCCACCCTGAGTGGCGGATAGAGGGCGACCGTATCGTA
TTCCAGGAGGCGGCTGGCAAGGCCGGCAAGGTACCTGAAATCCCCTCCAT
GCGTCTCATCACCGAGAGCTTATCGTACGCCACGGAGCTGGAGCGCATCG
TATGA
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