mRNA_P-wetherbeei_contig5722.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: D8LSK6_ECTSI (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK6_ECTSI) HSP 1 Score: 315 bits (808), Expect = 1.110e-102 Identity = 164/264 (62.12%), Postives = 201/264 (76.14%), Query Frame = 3
Query: 168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
L EGE+L + RA+AEKGD AKS L+QLK++MT+F SLPP+G P A +ER LAR ++EVAV +SAREGD+ FQRHMAQLKP M+ SQLPP+P + +LGLNLLFLLVENRLAEFHSELEL+ DAERA C+ FP +LEQFLMVGSYDQVL AR +PHEY +FL SL TVR+ IAECSE AY+ LS+A AQ++L++D +L+ F+ +PEW + D+I+F+ A K EIPSMRLI E LSYATELERIV
Sbjct: 4 LAEGEQLFASFRASAEKGDIQKAKSLLTQLKILMTTFDSLPPMGAEGPNAARERTLARDVMEVAVFLSAREGDSDAFQRHMAQLKPLCMDFVSQLPPSPNQSAVLGLNLLFLLVENRLAEFHSELELMGDAERASECVMFPVRLEQFLMVGSYDQVLAARDHVPHEYYKYFLESLLGTVRDGIAECSEAAYSELSIAEAQKMLRMDQRSELEAFVADKYPEWELTADKIIFK-APEACKKSAEIPSMRLIAECLSYATELERIV 266
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A836CF55_9STRA (SAC3/GANP/Nin1/mts3/eIF-3 p25 family-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF55_9STRA) HSP 1 Score: 300 bits (767), Expect = 2.170e-96 Identity = 157/274 (57.30%), Postives = 205/274 (74.82%), Query Frame = 3
Query: 147 MAPTQQGLQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYME--LGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQ-LQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
MAP Q GL +G LL +L+ +AE GD A +TLSQLK+++ +F SLPP G + TA+ ER LAR +LEVAV MSAR+GD RHMAQLKPYY++ L + LP + R+P+LGLNL+FLLVEN+LA+FHSELEL++D +R++ C+ FP +LEQ+LMVGSY+QVL A+ +PH+Y ++ L +L TVREAIA+C TAY S+SV AQ +L L Q L+ F+ T HPEW+I D++VFQ AA K+ EIPSMR+ITE+LSYATELERIV
Sbjct: 1 MAPVQDGLSQGSALLQSLKKSAEAGDMQAANATLSQLKLVLINFPSLPPGGEESATAKAERTLAREVLEVAVFMSARQGDKKALARHMAQLKPYYLDGQLATSLPDSSNRLPLLGLNLIFLLVENKLADFHSELELMSDEDRSNECVMFPIRLEQYLMVGSYNQVLAAKDHVPHQYYSYLLSNLVDTVREAIADCMSTAYDSMSVKDAQTMLMLPASAQELKNFVATFHPEWKIFDDKVVFQHAAATK-KMQEIPSMRVITETLSYATELERIV 273
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A7S2V1Z7_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z7_9STRA) HSP 1 Score: 254 bits (649), Expect = 2.460e-78 Identity = 139/278 (50.00%), Postives = 189/278 (67.99%), Query Frame = 3
Query: 129 LKSAQTMAPTQQGLQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYM-ELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
L +TMA Q+ L EG ++L ++ + G + A + L+QLK++MT LPP T + T+++ER AR +LE AV++S R+ +GF RH+AQLKPYY L +LP +P R+P+LGL+LLFLL ENRLAEFHSELELL + ERAD + FP +L+QFL VGSYDQVL+A+ S+PH Y +F+ S+ VREA+AEC+ AY +L++A+A LL+LDG F + EW + GD I F + + +IPSMRLI+ESL YATELERIV
Sbjct: 21 LPHRKTMAEIQRVLDEGNKILSQMKIDIDGGSLSQASTKLTQLKILMTKLPGLPPCTTDSSTSKKEREFARGVLEQAVLLSTRDEGKSGFPRHLAQLKPYYFGALHRELPASPLRLPVLGLHLLFLLTENRLAEFHSELELLAEEERADPHVRFPIELDQFLAVGSYDQVLEAKASVPHPYYAYFMDSIVDAVREAVAECTAAAYETLALASAATLLRLDGASAAAAFAQGR--EWDVRGDTIYFPRPE-TSKRASDIPSMRLISESLLYATELERIV 295
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A4D9D7E3_9STRA (CSN8_PSD8_EIF3K domain-containing protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D7E3_9STRA) HSP 1 Score: 253 bits (646), Expect = 2.910e-78 Identity = 134/266 (50.38%), Postives = 183/266 (68.80%), Query Frame = 3
Query: 168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVF--QEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
L++G++L+ L++A E A S L LKV++T+F SLPP+ +P A +E L R +LE AV ++ ++ D FQR MAQLKPYY + G L + RMPILGLNLLFLLVENRLAEFHSELE L++AERA+ +SFP +EQ LMVGSY +VL+AR PH FF+ L TVR+A+A+CSE AY L + AA+E+L L+ L ++ HP+W+++GD V+ ++ K K ++PS+RLI+E+LSYATELERIV
Sbjct: 3 LEQGKKLVIKLQSAVESDHLGEAASLLGDLKVLLTNFESLPPMNQPSPHASEECALGRQVLEQAVFLAVKQRDKIAFQRQMAQLKPYYQDKGRGLTDSALRMPILGLNLLFLLVENRLAEFHSELEHLSEAERANVYVSFPILVEQQLMVGSYHKVLEARTRTPHPGYAFFMSLLVDTVRDAVADCSEAAYERLGIGAAKEILLLESDTALAEYAAVKHPDWKVDGDGFVYFGKDHGPKQAKASDVPSLRLISETLSYATELERIV 268
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: UPI0007EFE15A (26S proteasome non-ATPase regulatory subunit 8 homolog A n=1 Tax=Daucus carota subsp. sativus TaxID=79200 RepID=UPI0007EFE15A) HSP 1 Score: 240 bits (613), Expect = 2.490e-73 Identity = 132/264 (50.00%), Postives = 177/264 (67.05%), Query Frame = 3
Query: 168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
L E +L + +AA +GD + + LSQLKV++T FRSLPP+ ATP A E +AR I E AVV+S + D F+R QLKP+Y + G +LPP+PQ PILGLNLL LLV+NR+AEFH+ELELL+ + + CI +LEQ M G+Y++VL AR S+PHE +FL L TVR+ IA CSE AY +LSVA A+++L R+L ++I HPEW ++ + FQ+A A EIPS++LIT++LSYA ELERIV
Sbjct: 5 LTELSQLFERFKAAMTRGDFDSCSNFLSQLKVMLTGFRSLPPLFEATPNAVHELTIARDIYEHAVVLSVKTEDQDAFERDFFQLKPFYTDAGDRLPPSPQEFPILGLNLLRLLVQNRIAEFHTELELLSASALENPCIRHAVELEQSFMEGAYNRVLSARQSVPHETYVYFLDLLAKTVRDEIAGCSEKAYDTLSVADARQMLLFSTDRELSEYINEEHPEWEMKNGLVTFQKAKESA-PCKEIPSLQLITQTLSYARELERIV 267
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A1U8A4S5_NELNU (26S proteasome non-ATPase regulatory subunit 8 homolog A-like n=1 Tax=Nelumbo nucifera TaxID=4432 RepID=A0A1U8A4S5_NELNU) HSP 1 Score: 233 bits (594), Expect = 1.730e-70 Identity = 125/258 (48.45%), Postives = 171/258 (66.28%), Query Frame = 3
Query: 186 LLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
L D +AA+ + DQ T LSQLKV++T F+SLPP+ +P A E +AR I E AVV+S + D F+R QLKPYY + G +LPP+PQ+ PILGLNLL LLV+NR+AEFH+ELELL+ + CI +LEQ M G+Y++VL AR ++PHE +F+ L TVR+ IA CSE AY LS++ A+++L ++L ++I HPEW I+ + FQ+A A EIPS++LI ++LSYA ELERIV
Sbjct: 11 LFDRFKAASVRNDQDTCTKLLSQLKVLLTGFKSLPPLFEESPDAIYELTIARDIYEHAVVLSVKTEDQDAFERDFFQLKPYYTDAGHRLPPSPQQYPILGLNLLRLLVQNRIAEFHTELELLSATTLENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSISDAKQMLMFSSEQELSEYITEEHPEWEIKNGFVYFQKAKESA-PCKEIPSLQLINQTLSYARELERIV 267
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: C6T763_SOYBN (PCI domain-containing protein n=2 Tax=Glycine subgen. Soja TaxID=1462606 RepID=C6T763_SOYBN) HSP 1 Score: 231 bits (589), Expect = 9.660e-70 Identity = 126/264 (47.73%), Postives = 174/264 (65.91%), Query Frame = 3
Query: 168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
L+E +L D +A+ + D T + LSQLKV++T FRSLPP+ TP A E +AR I E AVV+S + D F+R QLKPYY + ++LPP+PQ PILGLNLL LLV+NR+AEFH+ELELL+ A + CI +LEQ M G+Y++VL AR ++PH+ +F+ L TVR+ IA CSE AY LS+ A+++L ++L ++I+ HPEW I+ + FQ+A A EIPS++LI ++LSYA ELERIV
Sbjct: 5 LKEVSQLFDRFKASFIRNDFDTCSNLLSQLKVLLTGFRSLPPLFADTPNAVHELTIARDIYEHAVVLSVKNEDQDAFERDFFQLKPYYTDACNRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHDTYVYFMDLLAKTVRDEIAGCSEKAYDYLSIKDAKQMLLFSSDQELLEYIKEEHPEWEIKNGSVFFQKAKESA-PCKEIPSLQLINQTLSYARELERIV 267
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A7N0R9H5_KALFE (PCI domain-containing protein n=3 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0R9H5_KALFE) HSP 1 Score: 230 bits (587), Expect = 2.180e-69 Identity = 128/264 (48.48%), Postives = 174/264 (65.91%), Query Frame = 3
Query: 168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
L E +L + +AA + D T ++ LSQLKV++T F+SLPP+ TP A QE AR I E AVV+S + D F+R QLKPYY ++G +LPP+PQ PILGLNLL LLV+NR+AEFH+ELELL+ A + CI +LEQ M G+Y++VL AR ++PHE +F+ L TVR+ IA CSE AY L+V A+++L +L ++I+ HPEW I+ + FQ+A A EIPS++LI ++LSYA ELERIV
Sbjct: 9 LVEVSQLFERFKAAMIRKDFDTCETLLSQLKVMLTEFKSLPPLFETTPNAVQELTTARDIYEHAVVLSVKIEDQEAFERDFFQLKPYYTDVGGRLPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSPAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLTVNDAKQILLFSSDNELAEYIKEDHPEWEIKNGCVYFQKAKETA-PCKEIPSLQLINQTLSYARELERIV 271
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A059C2K3_EUCGR (PCI domain-containing protein n=6 Tax=rosids TaxID=71275 RepID=A0A059C2K3_EUCGR) HSP 1 Score: 229 bits (584), Expect = 5.400e-69 Identity = 123/253 (48.62%), Postives = 167/253 (66.01%), Query Frame = 3
Query: 201 RAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
+AA + D +T + LSQLKV++T F SLPP+ TP A E LAR I E AV++S + D F+R QLKPYY + G +PP+PQ PILGLNLL LLV+NR+AEFH+ELELL+ A + CI +LEQ M G+Y++VL AR ++PHE +F+ L TVR+ IA CSE AY LS+ A+++L ++L ++I+ HPEW I+ + FQ+A A EIPS++LI ++LSYA ELERIV
Sbjct: 16 KAALVRNDFSTCTTLLSQLKVLLTEFNSLPPLFEETPNAVHELTLARDIYEHAVILSVKMEDQEAFERDFFQLKPYYTDAGGCIPPSPQEYPILGLNLLRLLVQNRIAEFHTELELLSSAALENPCIKHAVELEQSFMEGAYNRVLSARQTVPHETYVYFMDLLAKTVRDEIAGCSEKAYDYLSIGDARQMLLFSSDQELAEYIKEEHPEWEIKSGSVYFQKAKESAPS-KEIPSLQLINQTLSYARELERIV 267
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Match: A0A2J6JPX2_LACSA (PCI domain-containing protein n=9 Tax=Asteraceae TaxID=4210 RepID=A0A2J6JPX2_LACSA) HSP 1 Score: 229 bits (583), Expect = 7.610e-69 Identity = 126/264 (47.73%), Postives = 173/264 (65.53%), Query Frame = 3
Query: 168 LQEGERLLDTLRAAAEKGDQATAKSTLSQLKVIMTSFRSLPPIGTATPTAEQERCLARSILEVAVVMSAREGDTTGFQRHMAQLKPYYMELGSQLPPAPQRMPILGLNLLFLLVENRLAEFHSELELLTDAERADRCISFPAQLEQFLMVGSYDQVLQARCSIPHEYCNFFLGSLDHTVREAIAECSETAYASLSVAAAQELLKLDGLRQLQQFIETSHPEWRIEGDRIVFQEAAGKAGKVPEIPSMRLITESLSYATELERIV 959
L E +L + +AA + D T LSQLK+++ F+SLPP+ TP A QE +AR I E AVV+S + D F+R QLKPYY ++GS+L +PQ PILGLNLL LLV+NR+AEFH+ELELL+ + CI +LEQ M G+Y++VL AR ++PHE +F+ L TVR+ IA CSE AY SL+V A+E+L + ++L +I+ HPEW ++ +VFQ+A A EIPS++LI ++LSYA ELERIV
Sbjct: 5 LTEVSQLFERFKAALVRNDFDTCSKLLSQLKILLIEFKSLPPLFEETPNAVQELTIARDIYEHAVVLSVKMEDQDAFERDFFQLKPYYTDVGSRLTQSPQEYPILGLNLLRLLVQNRIAEFHTELELLSANALENTCIKHAVELEQSFMEGAYNRVLTARQTVPHETYVYFMDLLARTVRDEIAGCSEKAYDSLTVKDAREMLLISSDQELFDYIKEEHPEWEVKNGLVVFQKAKESA-PCKEIPSLQLINQTLSYARELERIV 267 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5722.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5722.1.1 >prot_P-wetherbeei_contig5722.1.1 ID=prot_P-wetherbeei_contig5722.1.1|Name=mRNA_P-wetherbeei_contig5722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=285bp MSKLSARLKSAQTMAPTQQGLQEGERLLDTLRAAAEKGDQATAKSTLSQLback to top mRNA from alignment at P-wetherbeei_contig5722:973..2318+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5722.1.1 ID=mRNA_P-wetherbeei_contig5722.1.1|Name=mRNA_P-wetherbeei_contig5722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1346bp|location=Sequence derived from alignment at P-wetherbeei_contig5722:973..2318+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5722:973..2318+ >mRNA_P-wetherbeei_contig5722.1.1 ID=mRNA_P-wetherbeei_contig5722.1.1|Name=mRNA_P-wetherbeei_contig5722.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=855bp|location=Sequence derived from alignment at P-wetherbeei_contig5722:973..2318+ (Phaeothamnion wetherbeei SAG_119_79)back to top |