mRNA_P-wetherbeei_contig57204.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A8F4J8C4_9ACTN (Uncharacterized protein n=1 Tax=Aquihabitans sp. G128 TaxID=2849779 RepID=A0A8F4J8C4_9ACTN) HSP 1 Score: 113 bits (283), Expect = 8.930e-28 Identity = 60/93 (64.52%), Postives = 69/93 (74.19%), Query Frame = 1
Query: 76 PAAPVDPMSIVVQPAVAVTAVSTDATLRTADGRDRTYHVFVPDDLPAGES---VPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDGV 345
PA VDP V+PAVAV A + DATLRT DGR+RTYH+ VP + AG VPLL+ALHGGTG G QFER+SGF GLA+AN FIV YPDG+
Sbjct: 65 PAPVVDPDGTTVRPAVAVRARTVDATLRTPDGRERTYHLHVPPAVRAGTDGPRVPLLVALHGGTGSGLQFERSSGFSGLAEANDFIVAYPDGI 157
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A7X9Q2D7_9ACTN (Alpha/beta fold hydrolase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X9Q2D7_9ACTN) HSP 1 Score: 100 bits (250), Expect = 5.700e-23 Identity = 46/65 (70.77%), Postives = 52/65 (80.00%), Query Frame = 1
Query: 151 TLRTADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDGV 345
TL TADGR R Y ++VP LP VPLL+A HGGTGWG QFE+NSGFD LA+ANGF+VVYPDGV
Sbjct: 103 TLVTADGRTRVYRIYVPSSLP-NSPVPLLLAFHGGTGWGAQFEKNSGFDELAEANGFLVVYPDGV 166
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A524BKL5_9ACTO (Uncharacterized protein (Fragment) n=1 Tax=Actinomycetales bacterium mxb001 TaxID=1962179 RepID=A0A524BKL5_9ACTO) HSP 1 Score: 92.8 bits (229), Expect = 3.970e-22 Identity = 48/78 (61.54%), Postives = 54/78 (69.23%), Query Frame = 1
Query: 112 QPAVAVTAVSTDATLRTADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDGV 345
+PA A T+ TLRT DG +R+Y +FVP L PLL+ALHGG G G QFE NSGFDGLA ANGFIV YPDGV
Sbjct: 39 RPATAAMGTVTEHTLRTPDGLERSYRLFVPAGLTG--RAPLLLALHGGLGSGVQFETNSGFDGLATANGFIVAYPDGV 114
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A6I3HBR1_9ACTN (Polyhydroxybutyrate depolymerase n=8 Tax=root TaxID=1 RepID=A0A6I3HBR1_9ACTN) HSP 1 Score: 96.3 bits (238), Expect = 2.060e-21 Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 1
Query: 145 DATLRTADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDG 342
+ +LRT DGR RTY V+VP LPAG VPLL+A HGG G G+ FE NSG++GLA++NGF+V YPDG
Sbjct: 64 EGSLRTPDGRTRTYRVYVPSTLPAGARVPLLLAFHGGGGRGRGFEGNSGYNGLAESNGFVVAYPDG 129
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A6I3A2X0_9ACTN (Uncharacterized protein n=6 Tax=root TaxID=1 RepID=A0A6I3A2X0_9ACTN) HSP 1 Score: 95.9 bits (237), Expect = 3.190e-21 Identity = 46/77 (59.74%), Postives = 55/77 (71.43%), Query Frame = 1
Query: 115 PAVAVTAVSTDATLRTADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDGV 345
PAVA T S+ LRT DGR RTY ++VP L A PLL+ALHGG G QFE NSGFDGLA++N F+V+YPDG+
Sbjct: 59 PAVAPTGQSSVGQLRTPDGRIRTYRLYVPASLDASTPAPLLVALHGGLGTSAQFEANSGFDGLAESNRFVVIYPDGI 135
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A6I3C689_9ACTN (Alpha/beta fold hydrolase n=2 Tax=root TaxID=1 RepID=A0A6I3C689_9ACTN) HSP 1 Score: 95.1 bits (235), Expect = 7.330e-21 Identity = 43/69 (62.32%), Postives = 51/69 (73.91%), Query Frame = 1
Query: 139 STDATLRTADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDGV 345
S+ +RT DGR RTY V+VP L AG+ PLL+ALHGG G QFE NSGFD LA+AN F+VVYPDG+
Sbjct: 86 SSAGRIRTPDGRTRTYRVYVPSSLVAGQPAPLLVALHGGLGSSAQFEENSGFDALAEANRFVVVYPDGI 154
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A6I2XCX0_9ACTN (Phospholipase n=2 Tax=root TaxID=1 RepID=A0A6I2XCX0_9ACTN) HSP 1 Score: 94.0 bits (232), Expect = 1.450e-20 Identity = 43/64 (67.19%), Postives = 49/64 (76.56%), Query Frame = 1
Query: 151 TLRTADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDG 342
++ T DGR RTY ++VP AG +PLLIALHGG GWG QF NSGFDGLA+AN FIVVYPDG
Sbjct: 66 SITTPDGRVRTYRLYVPTAAEAGGRLPLLIALHGGLGWGAQFATNSGFDGLAEANRFIVVYPDG 129
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A6I3IC31_9ACTN (Polyhydroxybutyrate depolymerase n=4 Tax=root TaxID=1 RepID=A0A6I3IC31_9ACTN) HSP 1 Score: 92.0 bits (227), Expect = 1.130e-19 Identity = 42/67 (62.69%), Postives = 49/67 (73.13%), Query Frame = 1
Query: 142 TDATLRTADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDG 342
T+AT+ T DGR R Y +VP L G VPLL+ALHGG G +QFE NSGFDGLA +N F+VVYPDG
Sbjct: 101 TEATITTPDGRVRRYRTYVPASLVVGTKVPLLVALHGGLGHAEQFETNSGFDGLADSNQFVVVYPDG 167
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A7C1UCD0_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1UCD0_9ACTN) HSP 1 Score: 89.4 bits (220), Expect = 8.940e-19 Identity = 41/62 (66.13%), Postives = 50/62 (80.65%), Query Frame = 1
Query: 160 TADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDGV 345
T DGR R+YH++VP L E VPLL+ALHGG G G QFE++SGFD LA+ANGF+VVYPDG+
Sbjct: 131 TPDGRVRSYHLYVPSGL-GDEPVPLLVALHGGLGSGPQFEKDSGFDRLAEANGFVVVYPDGI 191
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Match: A0A7K0VF72_9ACTN (Polyhydroxybutyrate depolymerase n=4 Tax=root TaxID=1 RepID=A0A7K0VF72_9ACTN) HSP 1 Score: 87.4 bits (215), Expect = 5.380e-18 Identity = 45/89 (50.56%), Postives = 59/89 (66.29%), Query Frame = 1
Query: 79 AAPVDPMSIVVQPAVAVTAVSTDATLRTADGRDRTYHVFVPDDLPAGESVPLLIALHGGTGWGKQFERNSGFDGLAQANGFIVVYPDGV 345
+A +DP + +PA + ++ L DGR R + ++VP L GE+ PLLIALHGG G +QF NSGFD LA+ANGFIVVYPDG+
Sbjct: 75 SAELDPYATA-EPATSAVGKVSEEWLEAPDGRRRHFRLYVPTALRVGEAAPLLIALHGGLGTSEQFAVNSGFDELAEANGFIVVYPDGI 162 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57204.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57204.1.1 >prot_P-wetherbeei_contig57204.1.1 ID=prot_P-wetherbeei_contig57204.1.1|Name=mRNA_P-wetherbeei_contig57204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=115bp ITTTATNLATTTTSTAPTTSTTTTIPAAPVDPMSIVVQPAVAVTAVSTDAback to top mRNA from alignment at P-wetherbeei_contig57204:152..496+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57204.1.1 ID=mRNA_P-wetherbeei_contig57204.1.1|Name=mRNA_P-wetherbeei_contig57204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig57204:152..496+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57204:152..496+ >mRNA_P-wetherbeei_contig57204.1.1 ID=mRNA_P-wetherbeei_contig57204.1.1|Name=mRNA_P-wetherbeei_contig57204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=345bp|location=Sequence derived from alignment at P-wetherbeei_contig57204:152..496+ (Phaeothamnion wetherbeei SAG_119_79)back to top |