mRNA_P-wetherbeei_contig57165.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57165.1.1 vs. uniprot
Match: A0A7V9VUF4_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VUF4_9CHLR) HSP 1 Score: 178 bits (451), Expect = 2.280e-52 Identity = 83/170 (48.82%), Postives = 112/170 (65.88%), Query Frame = 1
Query: 1 VLSPRSQR--GTLRDLELAIALHLDTPEGWTVHAPGSGIRSAVPVPAFQGETPISDPCFSGSGAMVIDRRDPDTALLFWPFSRTEHLHTRLRFQDGALEFHVSTSLGGRIDVGERLRWGSIEIDCFDDTWDGLRPTTGGWFRTLGVAKPTDTAAWIPGSTLFEVQIGTSV 504
+LSP + R GTLR+L I + WT+ APGS +R +P + +S+ CFSGSG ++ + D T++L WPFSRTEH + ++ DGA F + + L GRI GERLR+GS EID FD+TW+ LRP WF +LG+++P DTA WIPGST+FEVQIGTS+
Sbjct: 124 ILSPTNGRNLGTLRNLHFQIDFAPNDLPNWTIEAPGSQMRPGIPADSVAERFAVSEACFSGSGVVLFQQPDRRTSVLVWPFSRTEHAYNYIQSVDGAARFSIESGLAGRIGQGERLRYGSFEIDVFDETWEELRPVAHSWFTSLGISRPVDTAPWIPGSTIFEVQIGTSM 293
BLAST of mRNA_P-wetherbeei_contig57165.1.1 vs. uniprot
Match: A0A7V9HJE4_9CHLR (DUF3459 domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9HJE4_9CHLR) HSP 1 Score: 184 bits (468), Expect = 2.290e-51 Identity = 85/162 (52.47%), Postives = 110/162 (67.90%), Query Frame = 1
Query: 19 QRGTLRDLELAIALHLDTPEGWTVHAPGSGIRSAVPVPAFQGETPISDPCFSGSGAMVIDRRDPDTALLFWPFSRTEHLHTRLRFQDGALEFHVSTSLGGRIDVGERLRWGSIEIDCFDDTWDGLRPTTGGWFRTLGVAKPTDTAAWIPGSTLFEVQIGTSV 504
++GTLR+L L I L D GW V APGS +R +P A +++P FSGSG +++ + D ALL WPFSRTEH T+++ DG + + + L GR+ GERLR+GS+E+D F TWD LRPT W TLGVAKP DTA+WIPG+T+FEVQIGTSV
Sbjct: 142 EQGTLRNLRLQIGLTPDNLAGWMVEAPGSPMRGGIPAAAITDRVAVTEPAFSGSGIVLVRQPDERIALLIWPFSRTEHAVTQMQTVDGVVRLSIDSGLAGRLRAGERLRYGSVELDVFGATWDELRPTAHAWLATLGVAKPGDTASWIPGATIFEVQIGTSV 303
BLAST of mRNA_P-wetherbeei_contig57165.1.1 vs. uniprot
Match: A0A7W0T0Q0_9CHLR (Aamy domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0T0Q0_9CHLR) HSP 1 Score: 183 bits (465), Expect = 5.950e-51 Identity = 87/170 (51.18%), Postives = 111/170 (65.29%), Query Frame = 1
Query: 1 VLSPRSQR--GTLRDLELAIALHLDTPEGWTVHAPGSGIRSAVPVPAFQGETPISDPCFSGSGAMVIDRRDPDTALLFWPFSRTEHLHTRLRFQDGALEFHVSTSLGGRIDVGERLRWGSIEIDCFDDTWDGLRPTTGGWFRTLGVAKPTDTAAWIPGSTLFEVQIGTSV 504
+LSP R TLRD + D +GW VHAPGS IRS +PV + E +SD CFSGSG +V+++ + +LL WPFSRTE R++ D L V+T L GRI +RLR+G +E+D FD WD LRPT WF TLG+A P DTAAWIPG++++EVQIGTSV
Sbjct: 136 ILSPTGDRPSATLRDFLIQFDFKPDELDGWLVHAPGSPIRSGLPVTMLEEEATLSDACFSGSGVVVLEQPEERRSLLIWPFSRTEQSRNRIQAVDDGLRISVATGLAGRIGADDRLRYGGVELDVFDTAWDELRPTAHAWFGTLGIAPPADTAAWIPGASIYEVQIGTSV 305
BLAST of mRNA_P-wetherbeei_contig57165.1.1 vs. uniprot
Match: A0A7W0KGB4_9CHLR (DUF3459 domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7W0KGB4_9CHLR) HSP 1 Score: 176 bits (446), Expect = 7.900e-49 Identity = 82/161 (50.93%), Postives = 105/161 (65.22%), Query Frame = 1
Query: 22 RGTLRDLELAIALHLDTPEGWTVHAPGSGIRSAVPVPAFQGETPISDPCFSGSGAMVIDRRDPDTALLFWPFSRTEHLHTRLRFQDGALEFHVSTSLGGRIDVGERLRWGSIEIDCFDDTWDGLRPTTGGWFRTLGVAKPTDTAAWIPGSTLFEVQIGTSV 504
+ TLR+L + I D +GW V APGS +R+ +P E + D CFSGSG +V+++ D ALL WPFSRTE R++ DGA+ V+T L GRI ERLR+G IE+D F WD LRPT WF T+G A P DTAAWIPG++++EVQIGTSV
Sbjct: 4 KATLRNLHIQIEFRPDDLDGWLVQAPGSPMRTGIPASQLVDEATVIDACFSGSGVVVLEQPDEHVALLVWPFSRTEQSRNRIQAVDGAVRISVATGLAGRIGPHERLRYGGIELDVFAAAWDELRPTAHAWFGTIGAATPADTAAWIPGASIYEVQIGTSV 164
BLAST of mRNA_P-wetherbeei_contig57165.1.1 vs. uniprot
Match: A0A7V9VWJ6_9CHLR (Aamy domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VWJ6_9CHLR) HSP 1 Score: 111 bits (277), Expect = 2.270e-25 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 277 DGALEFHVSTSLGGRIDVGERLRWGSIEIDCFDDTWDGLRPTTGGWFRTLGVAKPTDTAAWIPGSTLFEVQIGTSV 504
DGA F + + L GRI GERLR+GS+EID FD+TW+ LRP WF +LG+++P DTA WIPGST+FEVQIGTS+
Sbjct: 8 DGAARFSIESGLAGRIGQGERLRYGSVEIDVFDETWEELRPVAHSWFTSLGISRPVDTAPWIPGSTMFEVQIGTSM 83 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57165.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 5
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57165.1.1 >prot_P-wetherbeei_contig57165.1.1 ID=prot_P-wetherbeei_contig57165.1.1|Name=mRNA_P-wetherbeei_contig57165.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=168bp VLSPRSQRGTLRDLELAIALHLDTPEGWTVHAPGSGIRSAVPVPAFQGETback to top mRNA from alignment at P-wetherbeei_contig57165:3..506- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57165.1.1 ID=mRNA_P-wetherbeei_contig57165.1.1|Name=mRNA_P-wetherbeei_contig57165.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57165:3..506- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57165:3..506- >mRNA_P-wetherbeei_contig57165.1.1 ID=mRNA_P-wetherbeei_contig57165.1.1|Name=mRNA_P-wetherbeei_contig57165.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=504bp|location=Sequence derived from alignment at P-wetherbeei_contig57165:3..506- (Phaeothamnion wetherbeei SAG_119_79)back to top |