prot_P-wetherbeei_contig5716.2.1 (polypeptide) Phaeothamnion wetherbeei SAG_119_79

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_P-wetherbeei_contig5716.2.1
Unique Nameprot_P-wetherbeei_contig5716.2.1
Typepolypeptide
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Sequence length350
Homology
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A536U624_9PROT (Peptide deformylase n=7 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536U624_9PROT)

HSP 1 Score: 285 bits (728), Expect = 2.430e-93
Identity = 134/176 (76.14%), Postives = 148/176 (84.09%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            MIREVLKMGD RLL  +RPV  FGTP+L+ L+ADMRDTMAH+NGAGLAAPQIGV LRVVIFG   NPRYPDAE+VP TVLINP+I  L DEMEEGWEGCLSVPG+RGVVPR+ RLRY GFD  G  IDR  EGFHARVVQHECDHLDGILYPMR+ D ++FGF E LFP QE+ D+
Sbjct:    1 MIREVLKMGDPRLLEKSRPVEAFGTPQLRGLIADMRDTMAHLNGAGLAAPQIGVPLRVVIFGLTRNPRYPDAEEVPHTVLINPVITPLDDEMEEGWEGCLSVPGMRGVVPRFKRLRYTGFDESGKPIDRSVEGFHARVVQHECDHLDGILYPMRIRDMSKFGFAEVLFPDQELIDE 176          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A5C7L3Z4_9GAMM (Peptide deformylase n=1 Tax=Sinobacteraceae bacterium TaxID=1969813 RepID=A0A5C7L3Z4_9GAMM)

HSP 1 Score: 283 bits (723), Expect = 1.390e-92
Identity = 135/176 (76.70%), Postives = 148/176 (84.09%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            MIR+VL+MGD RLL VA PVA F TPEL AL+ADM DTM H+NGAGLAAPQIGV+LRVVIFG   +PRYPDAE VP TVLINP I+F+ DEME+GWEGCLSVPGLRGVVPR+ RLRYRGFDA G  IDR    FHARVVQHECDHLDGILYPMRV DF+RFGF + LFPG + ADD
Sbjct:    1 MIRDVLRMGDPRLLRVAEPVAAFDTPELHALIADMFDTMRHLNGAGLAAPQIGVNLRVVIFGFGSSPRYPDAEPVPETVLINPQIDFIGDEMEDGWEGCLSVPGLRGVVPRHRRLRYRGFDASGRPIDRTVGDFHARVVQHECDHLDGILYPMRVRDFSRFGFTDVLFPGLQDADD 176          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A1F4C5Y9_9PROT (Peptide deformylase n=3 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4C5Y9_9PROT)

HSP 1 Score: 281 bits (718), Expect = 7.980e-92
Identity = 131/176 (74.43%), Postives = 152/176 (86.36%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            MIREVLKMGD RLL  A+P+ QF TPEL ALLAD+RDTMAH+NGAGLAAPQIGV L+VVIFG   NPRYP  ED+P TVLINP++  LSDE+EE WEGCLS+PGLRG+VPR+ARLRY+GFD  GN IDR  +GFHARVVQHECDHL GILYPMR+ DF++FGFI+ALFPG++V D+
Sbjct:    1 MIREVLKMGDPRLLQQAQPLQQFDTPELHALLADLRDTMAHLNGAGLAAPQIGVGLQVVIFGVEQNPRYPQVEDIPDTVLINPVLTPLSDELEEDWEGCLSLPGLRGMVPRHARLRYQGFDEKGNPIDRSVDGFHARVVQHECDHLLGILYPMRIRDFSKFGFIQALFPGEDVIDE 176          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: UPI000486D17F (peptide deformylase n=1 Tax=Solimonas soli TaxID=413479 RepID=UPI000486D17F)

HSP 1 Score: 280 bits (716), Expect = 1.600e-91
Identity = 131/176 (74.43%), Postives = 150/176 (85.23%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            MIR+VLKMGD RLL +A PV  F TPEL+AL+ D+ DTM H+NGAGLAAPQIGV+LRVVIFG   N RYPDA  VP T+L+NP++  LSDEME+GWEGCLSVPGLRGVVPR+ RLRY+GFD +G  IDRV+EGFHARVVQHECDHLDGILYPMR+ DFTRFGF + LFPGQ +ADD
Sbjct:    1 MIRDVLKMGDARLLRIAEPVRAFATPELRALVGDLFDTMRHLNGAGLAAPQIGVNLRVVIFGFAANARYPDAPPVPETILVNPVLTPLSDEMEDGWEGCLSVPGLRGVVPRHRRLRYQGFDMEGAPIDRVSEGFHARVVQHECDHLDGILYPMRIRDFTRFGFQDVLFPGQALADD 176          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A2N2TTS4_9PROT (Peptide deformylase n=1 Tax=Betaproteobacteria bacterium HGW-Betaproteobacteria-14 TaxID=2013705 RepID=A0A2N2TTS4_9PROT)

HSP 1 Score: 278 bits (711), Expect = 9.180e-91
Identity = 129/176 (73.30%), Postives = 148/176 (84.09%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            MIRE+LKMGD RLL  +RPV  +GTPEL AL+ DM+DTM   NGAGLAAPQIGV LRVVIFG   NPRYP AE VPFT+L+NP++  LSDE+EEGWEGCLSVPGLRGVVPR+ARL YRGFDADG+ I+R A GFHARVVQHECDHLDGILYPMR+ DFTRFG+ + LFP  ++ +D
Sbjct:    1 MIREILKMGDPRLLQASRPVEAYGTPELHALIGDMQDTMRAANGAGLAAPQIGVGLRVVIFGFESNPRYPQAEAVPFTILVNPVLTPLSDELEEGWEGCLSVPGLRGVVPRWARLVYRGFDADGSLIEREATGFHARVVQHECDHLDGILYPMRIRDFTRFGYTDVLFPDADIPED 176          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A1F4DLF8_9PROT (Peptide deformylase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4DLF8_9PROT)

HSP 1 Score: 278 bits (711), Expect = 9.180e-91
Identity = 129/176 (73.30%), Postives = 150/176 (85.23%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            MIREVL+MGD RL+ V+R V  F TP+L AL+ DMR+TM H+NGAGLAAPQIGV LRVVIFG + NPRYPDAE+VP TVLINP+++ + DE+E+GWEGCLSVPGLRGVVPR+ RLRY GFDA G  I+R  EGFHARVVQHECDHLDGILYPMR+ DF++FGF + LFPGQEV DD
Sbjct:    1 MIREVLRMGDPRLVQVSRLVETFDTPDLHALIEDMRETMQHLNGAGLAAPQIGVLLRVVIFGVHANPRYPDAEEVPDTVLINPVLDPIGDEIEDGWEGCLSVPGLRGVVPRFRRLRYSGFDARGERIERTVEGFHARVVQHECDHLDGILYPMRIRDFSQFGFTDVLFPGQEVQDD 176          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: I8TDY7_9GAMM (Peptide deformylase n=1 Tax=Hydrocarboniphaga effusa AP103 TaxID=1172194 RepID=I8TDY7_9GAMM)

HSP 1 Score: 277 bits (708), Expect = 2.620e-90
Identity = 132/176 (75.00%), Postives = 148/176 (84.09%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            MIR VL+MGD RLL V+RPV +FGTPEL+ L+ADM DTM  +NGAGLAAPQIGV LRVVIFG   +PRYP+A+ VP T+LINP++  LSDE EEGWEGCLSVPGLRGVVPRY RLRY GFD  G+ IDR  +GFHARVVQHECDHLDGILYPMRV DFTRFGF E LFPGQ++ DD
Sbjct:    1 MIRPVLRMGDARLLRVSRPVERFGTPELRELVADMFDTMRALNGAGLAAPQIGVDLRVVIFGFTSSPRYPNAQAVPETILINPVLTPLSDEQEEGWEGCLSVPGLRGVVPRYQRLRYTGFDLHGDVIDRNVDGFHARVVQHECDHLDGILYPMRVRDFTRFGFNEELFPGQQINDD 176          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A1Y0BAL2_9BACT (Peptide deformylase n=1 Tax=uncultured bacterium TaxID=77133 RepID=A0A1Y0BAL2_9BACT)

HSP 1 Score: 276 bits (707), Expect = 3.840e-90
Identity = 132/171 (77.19%), Postives = 142/171 (83.04%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQ 344
            MIREVL+MGD RLL  ARPV +FGTPEL ALLADMRDTMAH+NGAGLAAPQIGV LRVVIFG   NPRYP  E+VP TVLINP IE L +EMEE WEGCLSVPG+RG VPRY RLRY GFD  G  I+R A  FHARVVQHECDHLDGILYPMR+ DF +FGF EALFPG+
Sbjct:    1 MIREVLRMGDPRLLQRARPVERFGTPELAALLADMRDTMAHLNGAGLAAPQIGVGLRVVIFGVRSNPRYPHVEEVPDTVLINPEIEILGEEMEEDWEGCLSVPGMRGAVPRYRRLRYAGFDEQGRRIERAAGEFHARVVQHECDHLDGILYPMRIRDFAKFGFNEALFPGE 171          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A6M4H3W8_9PROT (Peptide deformylase n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H3W8_9PROT)

HSP 1 Score: 276 bits (705), Expect = 7.710e-90
Identity = 130/174 (74.71%), Postives = 145/174 (83.33%), Query Frame = 0
Query:  176 REVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            REVL+MGD  L  VARPV +FGTPEL  L+ DM+DTMA  NGAGLAAPQIGVS RVVIFG   NPRYPDAE+VPFTVL+NP IEFL+ E+EEGWEGCLSVPG+RGVVPR+ +LRY GFD  G  IDR+AEGFHA VVQHECDHLDGILYPMR+TD +RFGF + LFP  EV DD
Sbjct:    4 REVLRMGDPVLAQVARPVEKFGTPELAELVQDMKDTMAAKNGAGLAAPQIGVSQRVVIFGVGSNPRYPDAEEVPFTVLVNPKIEFLTKEIEEGWEGCLSVPGMRGVVPRFTKLRYTGFDEHGAPIDRIAEGFHAIVVQHECDHLDGILYPMRMTDMSRFGFTDVLFPDMEVVDD 177          
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Match: A0A4U0GJE0_9GAMM (Peptide deformylase n=1 Tax=Sinimarinibacterium sp. CAU 1509 TaxID=2562283 RepID=A0A4U0GJE0_9GAMM)

HSP 1 Score: 275 bits (704), Expect = 1.060e-89
Identity = 130/176 (73.86%), Postives = 144/176 (81.82%), Query Frame = 0
Query:  174 MIREVLKMGDERLLLVARPVAQFGTPELKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPFTVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAIDRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD 349
            MIRE+L+MGD RLL +ARPVA FGTPEL AL+ADMR+TMA  NGAGLAAPQIGV LRVVIFG   NPRYPDAE VPFTVL NP +  LSD  EEGWEGCLSVPG+RG+VPRYARLRY GFD +G  I+R   GFHARVVQHECDHLDG+LYPMR+ D  +FGF E LFPG  + DD
Sbjct:    1 MIREILRMGDPRLLQMARPVADFGTPELHALIADMRETMAAANGAGLAAPQIGVDLRVVIFGVGHNPRYPDAETVPFTVLCNPQLTPLSDAQEEGWEGCLSVPGMRGLVPRYARLRYSGFDPEGTPIEREVSGFHARVVQHECDHLDGVLYPMRIRDLRQFGFTEILFPGLGLIDD 176          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5716.2.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536U624_9PROT2.430e-9376.14Peptide deformylase n=7 Tax=Betaproteobacteria bac... [more]
A0A5C7L3Z4_9GAMM1.390e-9276.70Peptide deformylase n=1 Tax=Sinobacteraceae bacter... [more]
A0A1F4C5Y9_9PROT7.980e-9274.43Peptide deformylase n=3 Tax=unclassified Betaprote... [more]
UPI000486D17F1.600e-9174.43peptide deformylase n=1 Tax=Solimonas soli TaxID=4... [more]
A0A2N2TTS4_9PROT9.180e-9173.30Peptide deformylase n=1 Tax=Betaproteobacteria bac... [more]
A0A1F4DLF8_9PROT9.180e-9173.30Peptide deformylase n=2 Tax=unclassified Betaprote... [more]
I8TDY7_9GAMM2.620e-9075.00Peptide deformylase n=1 Tax=Hydrocarboniphaga effu... [more]
A0A1Y0BAL2_9BACT3.840e-9077.19Peptide deformylase n=1 Tax=uncultured bacterium T... [more]
A0A6M4H3W8_9PROT7.710e-9074.71Peptide deformylase n=1 Tax=Usitatibacter palustri... [more]
A0A4U0GJE0_9GAMM1.060e-8973.86Peptide deformylase n=1 Tax=Sinimarinibacterium sp... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR023635Peptide deformylasePRINTSPR01576PDEFORMYLASEcoord: 301..330
score: 41.6
coord: 282..300
score: 27.97
coord: 206..235
score: 41.17
coord: 270..281
score: 60.96
IPR023635Peptide deformylasePFAMPF01327Pep_deformylasecoord: 176..330
e-value: 1.4E-44
score: 151.5
IPR023635Peptide deformylaseTIGRFAMTIGR00079TIGR00079coord: 176..330
e-value: 3.4E-32
score: 109.2
IPR023635Peptide deformylasePANTHERPTHR10458PEPTIDE DEFORMYLASEcoord: 174..340
IPR023635Peptide deformylaseHAMAPMF_00163Pep_deformylasecoord: 174..343
score: 26.563353
IPR023635Peptide deformylaseCDDcd00487Pep_deformylasecoord: 178..324
e-value: 1.87817E-66
score: 204.257
IPR036821Peptide deformylase superfamilyGENE3D3.90.45.10Peptide deformylasecoord: 170..349
e-value: 2.3E-57
score: 195.0
IPR036821Peptide deformylase superfamilySUPERFAMILY56420Peptide deformylasecoord: 174..340
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 117..172
NoneNo IPR availablePANTHERPTHR10458:SF20PEPTIDE DEFORMYLASE 1coord: 174..340

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5716contigP-wetherbeei_contig5716:2681..3730 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5716.2.1mRNA_P-wetherbeei_contig5716.2.1Phaeothamnion wetherbeei SAG_119_79mRNAP-wetherbeei_contig5716 2681..3730 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_P-wetherbeei_contig5716.2.1 ID=prot_P-wetherbeei_contig5716.2.1|Name=mRNA_P-wetherbeei_contig5716.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=350bp
VAEGFRRRLSRLGGRHRPGLPTGQARGAGSDYRLHLGQALHLLRGPRRES
HAHRLYGTVFPAAPRRHPASRRCLRRAGSGRRCLCGDPGPATRNCGRNQS
PREGWCRAGRNDCDARGRAGTGTGDGIRSNSRGGELRRRQGGQPARNIHG
ADRSGPGGSDGQGSQDHRIVGGPMIREVLKMGDERLLLVARPVAQFGTPE
LKALLADMRDTMAHMNGAGLAAPQIGVSLRVVIFGANGNPRYPDAEDVPF
TVLINPLIEFLSDEMEEGWEGCLSVPGLRGVVPRYARLRYRGFDADGNAI
DRVAEGFHARVVQHECDHLDGILYPMRVTDFTRFGFIEALFPGQEVADD*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR023635Peptide_deformylase
IPR036821Peptide_deformylase_sf