mRNA_P-wetherbeei_contig5714.3.2 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig5714.3.2
Unique NamemRNA_P-wetherbeei_contig5714.3.2
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: A0A6H5KV70_9PHAE (Methyltransf_25 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KV70_9PHAE)

HSP 1 Score: 164 bits (414), Expect = 3.760e-43
Identity = 144/453 (31.79%), Postives = 184/453 (40.62%), Query Frame = 1
Query:   43 EQEWESLRGELGAEALAALQGHGGATRMDNCLEHSGAAANGDGMSSQPPAAEEAVTTPAITGAAAAAEDLRP----------GSNARYGRHDYWEKRFTEEESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFADGY--TDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRKYLLGHHLGLLPQPPPLASSGGDDCHRSGGXXXDGCASXXXXXXXARSSFDGVGPGECSSDAAGARDGEEAASGSAKARTDGACPYGWDLETHELRRGNGGCGYCVYGMTKR 1365
            E +W SL   L AE L +L+ H         L+H   A      S++  AAE    + A   + +      P           SN  Y   +YW+ RF+EEESY+WL  Y D+ + +  A+P D  V  L+VGCGNS LSA M+ DGY   D++STD+SA VI  M A+H                                                                                     AA PG   LRW   D   LA   D SF AVVDKA MDAL+V++GDPWSP+ A +   HRMCA VSRVL  GG F+Q+SF Q HFRRK+LLG H          A++G  D  R G                               D   + DGE            G  PYGWDL+ H+++R  G  G  +Y + KR
Sbjct:   16 EVDWVSLETNLSAETLESLRQH---------LQHQDGATVAAPSSAEERAAEAEPVSAADGSSRSGGGSTSPTRNAGLVALPASNLVYKAKEYWDSRFSEEESYDWLASYADIAEHLHEAVPRDARV--LVVGCGNSGLSADMYDDGYRRVDMVSTDFSAVVIDKMRAKHL------------------------------------------------------------------------------------AARPG---LRWEKMDMLALAA-EDASFDAVVDKAAMDALMVDKGDPWSPDRATIEQSHRMCAEVSRVLVSGGVFVQLSFEQVHFRRKFLLGEH---------PAAAGLLDARRQG------------------------------EDEGHSNDGE------------GGGPYGWDLQVHDIQREGGCFGQFLYLLRKR 318          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: B5Y4M4_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B5Y4M4_PHATC)

HSP 1 Score: 127 bits (320), Expect = 2.660e-31
Identity = 83/260 (31.92%), Postives = 112/260 (43.08%), Query Frame = 1
Query:  265 NARYGRHDYWEKRFTEEESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFADGYTDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRP-GGRFLQISFAQPHFRRKYLL 1041
            N+ YG HDYWE RF  E+S+EWL+ Y+ +   +   L P   +  L+VGCGN+  SA ++  GY ++++ DYS TVIA M  RH                                                                                             + W V D T L+ L D SF  V+DKA MDA++ +E D W+P+ +VV     MC  +SR+LRP GG FLQIS AQPHFR++YLL
Sbjct:    1 NSTYGSHDYWEDRFENEDSFEWLLSYEQLAAQIEPHLLPVSRI--LVVGCGNAPFSADLYDAGYHNIVNVDYSETVIANMQQRHLTERLQ---------------------------------------------------------------------------------------MEWLVMDMTDLSALMDASFDVVIDKAAMDAIMTKESDVWNPDASVVRASRDMCRHISRILRPDGGVFLQISLAQPHFRKRYLL 171          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: A0A485KM56_9STRA (Aste57867_9023 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KM56_9STRA)

HSP 1 Score: 118 bits (296), Expect = 2.200e-27
Identity = 81/264 (30.68%), Postives = 111/264 (42.05%), Query Frame = 1
Query:  256 PGSNARYGRHDYWEKRFTEEESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFADGYTDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATML-AGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRKYLLG 1044
            P  N  Y + +YW  RF  EE+Y+WL RY DV + +   +  D    LLIVGCGNS  S  ++  GYT++ + D+S+ VI  M A++                                                                                    SA+ P    + W V D   L A  +  SF  V+DKA MDAL+VE GD WSP   ++A+ H MCA +  +L   G F+QISF QPHFR+++LLG
Sbjct:    6 PRDNKEYKKQEYWNSRFENEETYDWLARYKDVAELIAQYVQKDQR--LLIVGCGNSTFSIDLYEAGYTNITNLDFSSVVIERMHAKY------------------------------------------------------------------------------------SASHPL---MTWVVGDMLKLPAQFSPASFDVVIDKAAMDALMVEGGDTWSPAEHLLASGHEMCAGIQSILVTTGLFIQISFGQPHFRKRFLLG 180          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: I7M0P5_TETTS (S-adenosylmethionine-dependent methyltransferase n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=I7M0P5_TETTS)

HSP 1 Score: 113 bits (282), Expect = 3.630e-25
Identity = 75/265 (28.30%), Postives = 105/265 (39.62%), Query Frame = 1
Query:  247 DLRPGSNARYGRHDYWEKRFTEEESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFADGYTDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRKYLL 1041
            D  P  N  Y   +YW+ RFT+E+ YEWL  Y D++D +   +     +  L+VGCGNS+L   M  DGY +V+S+D+S TVI  M+ +  +                                                                                            +W V+D   L    DG F  V DKA MDALV +EG  W+P    V     MC AV RVL+  G+FLQ++F  P+FR++Y+L
Sbjct:   37 DTMPKDNTTYKLKEYWDFRFTKEQKYEWLASYQDIKDVLSQHVKKSDKI--LLVGCGNSQLGPEMTQDGYENVISSDFSVTVIKNMSEKFPEQ-------------------------------------------------------------------------------------------KWVVSDVKNLKEFQDGEFDVVFDKATMDALVTDEGSCWNPNQKTVDDCSEMCQAVHRVLKKEGKFLQLTFQDPYFRKRYIL 208          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: A0A7S3LKC0_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LKC0_9STRA)

HSP 1 Score: 110 bits (276), Expect = 1.550e-24
Identity = 79/272 (29.04%), Postives = 106/272 (38.97%), Query Frame = 1
Query:  262 SNARYGRHDYWEKRFTEEESYEWLVRYDDVRDAVRAALP----PDMAVP---------LLIVGCGNSRLSAAMFADGYTDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRKYL 1038
            +N  Y   +YW+ RF EE+SYEWL RY DV++ ++   P    PD ++          +LIVGCGNS  S  +   G  + +S DYS  VI  M+ +H +                                                                                           L W   D T + G  D  F  ++DKA MDALV +EGDPW+P  + + +   M   V R L+PGG+FLQISF QPHFR  YL
Sbjct:    6 ANKVYKTVEYWDDRFKEEDSYEWLARYRDVKELLQKHAPDIFQPDSSLVSENAKPAPRVLIVGCGNSSFSYDLHCAGVRNSVSIDYSKVVIERMSKKHPE-------------------------------------------------------------------------------------------LEWKKMDMTKMGGFQDCVFDYIIDKAAMDALVTDEGDPWNPSESSLNSTRNMITEVVRTLKPGGKFLQISFQQPHFRNMYL 186          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: A0A7S2Y3W0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y3W0_9STRA)

HSP 1 Score: 109 bits (272), Expect = 3.390e-24
Identity = 54/86 (62.79%), Postives = 64/86 (74.42%), Query Frame = 1
Query:  793 GLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRKYLLGHH 1050
            G++W V D   L    +GSF  V+DKA MDAL+ EEGDPW+P   VV +V RMC+ +SRVLRPGG  LQISFAQPHFRRKYL+G H
Sbjct:   68 GMKWEVMDMMDLT-FDEGSFDCVLDKAAMDALMCEEGDPWNPNSEVVTSVSRMCSCISRVLRPGGVHLQISFAQPHFRRKYLMGEH 152          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: A0A5A8D3X1_CAFRO (Uncharacterized protein n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D3X1_CAFRO)

HSP 1 Score: 110 bits (275), Expect = 5.200e-24
Identity = 83/274 (30.29%), Postives = 111/274 (40.51%), Query Frame = 1
Query:  241 AEDLRPGSNAR-YGRHDYWEKRFTE-------EESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFADGYTDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRKYL 1038
            A+ + P S +  Y   DYWE RF         +  +EWL  +DD++  V   +P D A  +L+VGCG+SRL   M   GY+ V+ TDYS   +  M A HAD          D L                                                         + G  G      +AA+PG                 A G F AV+DKA MDA++  +GD W P   ++   H +C   +  LRPGG +LQ+SFAQPHFRR YL
Sbjct:   11 ADGVTPRSGSELYTSKDYWEYRFKPKAEGGGGDSDFEWLASWDDLKRIVELVIP-DKAARVLLVGCGSSRLGRDMARAGYSRVVQTDYSLACVETMRAAHADEFPGMVFAVADMLR----------------------------------------------LPEDLRAAGLLGGPAGEPAA--AAADPG---------------AAAAGLFDAVIDKAAMDAMLAGKGDVWDPPTDLLEQAHAVCKGTAEALRPGGVYLQVSFAQPHFRRPYL 220          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: UPI0014718DEE (EEF1A lysine methyltransferase 4 n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI0014718DEE)

HSP 1 Score: 104 bits (259), Expect = 6.850e-22
Identity = 69/264 (26.14%), Postives = 110/264 (41.67%), Query Frame = 1
Query:  256 PGSNARYGRHDYWEKRFTEEESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFADGYTDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRKYLLGH 1047
            P  N+RY   DYW++R+  E+ YEWL  +   +  V   +  D ++  L++GCGNS +SA M++ GY  + + D+S+  I+AM+ARH+D                                                                                          G+ W   D + L+   D SF  V++KA +D+++V E +PW+  P   + +H+    VSR+L+PGGRFL I+F QP FR++    H
Sbjct:    5 PEDNSRYKDVDYWDERYKTEQGYEWLGSFSKFQHLVEKHIKKDDSI--LVLGCGNSSMSADMYSAGYHSITNIDFSSVCISAMSARHSDCP----------------------------------------------------------------------------------------GMSWQQMDMSQLS-FRDESFDVVLEKATLDSVMVIEKNPWNVSPQTTSLIHQALTEVSRILKPGGRFLSITFTQPFFRKQLYARH 177          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: A0A6A4TTQ5_SCOMX (Methyltransf_11 domain-containing protein n=2 Tax=Scophthalmus maximus TaxID=52904 RepID=A0A6A4TTQ5_SCOMX)

HSP 1 Score: 103 bits (258), Expect = 1.050e-21
Identity = 71/262 (27.10%), Postives = 106/262 (40.46%), Query Frame = 1
Query:  247 DLRPGSNARYGRHDYWEKRFTEEESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFADGYTDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRK 1032
            D  P  N+RY   DYW++R+T E+SY+WL  +   R  +   +  + ++  LI+GCGNS +S  M+  GY  + + DYS+  I+AMAARH+D         PD                                                                                + W   D   L      SF  +++KA +DA+ VEE  PW   P      H+  + +SR L+PGGRF+ ++FAQPHFR++
Sbjct:    2 DYVPDDNSRYKDVDYWDERYTTEQSYDWLGCFSKFRHILENHVKKEDSI--LILGCGNSSMSGDMYTAGYHSITNIDYSSVCISAMAARHSDC--------PD--------------------------------------------------------------------------------MTWRQMDVRQLC-FPSMSFDVILEKATLDAISVEEKSPWDVSPQTACFFHQALSEISRCLKPGGRFVSVTFAQPHFRKR 172          
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Match: A0A8C2A2W2_CYPCA (Endothelin converting enzyme 2a n=3 Tax=Cyprinus carpio TaxID=7962 RepID=A0A8C2A2W2_CYPCA)

HSP 1 Score: 103 bits (257), Expect = 1.850e-21
Identity = 71/259 (27.41%), Postives = 104/259 (40.15%), Query Frame = 1
Query:  256 PGSNARYGRHDYWEKRFTEEESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFADGYTDVLSTDYSATVIAAMAARHADAXXXXXXXXPDGLESRGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPIAGTKGXXXXXXSAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEEGDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRK 1032
            P SNARY   +YW +R++ EES+EW   +      ++  +  +  +  L++GCGNS LS  M+  GYT + + DYS+  + +MA RH D                                                                                           L W   DA  LA   DG F  V++K  +DA++VEE DPW         +H++   VSRVL+PGGRF+ ++FAQPHFR++
Sbjct:   23 PDSNARYKDVNYWNERYSTEESFEWFGDFTKFEHLLKQHVGTEENI--LMLGCGNSALSYDMYQAGYTSITNVDYSSICVESMAERHKDCAQ----------------------------------------------------------------------------------------LSWLCMDARRLA-FPDGVFDVVLEKGTLDAMLVEESDPWKVSENAAKLLHQVLLEVSRVLKPGGRFISVTFAQPHFRKR 190          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5714.3.2 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KV70_9PHAE3.760e-4331.79Methyltransf_25 domain-containing protein n=2 Tax=... [more]
B5Y4M4_PHATC2.660e-3131.92Predicted protein (Fragment) n=2 Tax=Phaeodactylum... [more]
A0A485KM56_9STRA2.200e-2730.68Aste57867_9023 protein n=1 Tax=Aphanomyces stellat... [more]
I7M0P5_TETTS3.630e-2528.30S-adenosylmethionine-dependent methyltransferase n... [more]
A0A7S3LKC0_9STRA1.550e-2429.04Hypothetical protein n=1 Tax=Aplanochytrium stocch... [more]
A0A7S2Y3W0_9STRA3.390e-2462.79Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A5A8D3X1_CAFRO5.200e-2430.29Uncharacterized protein n=2 Tax=Cafeteria roenberg... [more]
UPI0014718DEE6.850e-2226.14EEF1A lysine methyltransferase 4 n=1 Tax=Thalassop... [more]
A0A6A4TTQ5_SCOMX1.050e-2127.10Methyltransf_11 domain-containing protein n=2 Tax=... [more]
A0A8C2A2W2_CYPCA1.850e-2127.41Endothelin converting enzyme 2a n=3 Tax=Cyprinus c... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig5714contigP-wetherbeei_contig5714:1980..3734 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FJW5
Preferred nameECE2
PFAMsMethyltransf_11,Methyltransf_25,Methyltransf_31,Peptidase_M13,Peptidase_M13_N
Model size1374
Max annot lvl2759|Eukaryota
KEGG koko:K01415
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0003824,GO:0004175,GO:0004222,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0006464,GO:0006479,GO:0006508,GO:0006518,GO:0006807,GO:0007275,GO:0007399,GO:0007417,GO:0007420,GO:0007507,GO:0008150,GO:0008152,GO:0008168,GO:0008170,GO:0008213,GO:0008233,GO:0008237,GO:0008276,GO:0008757,GO:0009987,GO:0010002,GO:0010467,GO:0010817,GO:0012505,GO:0012506,GO:0016020,GO:0016278,GO:0016279,GO:0016485,GO:0016486,GO:0016740,GO:0016741,GO:0016787,GO:0018022,GO:0018193,GO:0018205,GO:0019538,GO:0030133,GO:0030154,GO:0030658,GO:0030659,GO:0031090,GO:0031410,GO:0031982,GO:0031984,GO:0032259,GO:0032501,GO:0032502,GO:0034641,GO:0035051,GO:0036211,GO:0042445,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043414,GO:0043603,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044431,GO:0044433,GO:0044444,GO:0044446,GO:0044464,GO:0048513,GO:0048731,GO:0048856,GO:0048863,GO:0048869,GO:0051604,GO:0060322,GO:0065007,GO:0065008,GO:0070011,GO:0071704,GO:0072359,GO:0097708,GO:0098588,GO:0098791,GO:0098805,GO:0140096,GO:1901564
Exons3
Evalue2.63e-47
EggNOG OGsKOG2352@1|root,KOG2352@2759|Eukaryota
Ec32 ortholog descriptionS-adenosyl-L-methionine-dependent methyltransferase
Ec32 orthologEc-10_000720.1
EC3.4.24.71
Descriptionmethyltransferase activity
Cds size1374
COG categoryS
BRITEko00000,ko01000,ko01002,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186847.920309-CDS-P-wetherbeei_contig5714:1979..20811683186847.920309-CDS-P-wetherbeei_contig5714:1979..2081Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5714 1980..2081 +
1683186847.9329488-CDS-P-wetherbeei_contig5714:2233..24601683186847.9329488-CDS-P-wetherbeei_contig5714:2233..2460Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5714 2234..2460 +
1683186847.9428408-CDS-P-wetherbeei_contig5714:2689..37341683186847.9428408-CDS-P-wetherbeei_contig5714:2689..3734Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig5714 2690..3734 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig5714.3.2prot_P-wetherbeei_contig5714.3.2Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig5714 1980..3734 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig5714.3.2

>prot_P-wetherbeei_contig5714.3.2 ID=prot_P-wetherbeei_contig5714.3.2|Name=mRNA_P-wetherbeei_contig5714.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=458bp
MACSSSSSSSIGNNEQEWESLRGELGAEALAALQGHGGATRMDNCLEHSG
AAANGDGMSSQPPAAEEAVTTPAITGAAAAAEDLRPGSNARYGRHDYWEK
RFTEEESYEWLVRYDDVRDAVRAALPPDMAVPLLIVGCGNSRLSAAMFAD
GYTDVLSTDYSATVIAAMAARHADADADAGAAAPDGLESRGGAGGDGSDG
SVSIQGTSVAAAAATELAAALAASAEPTPATPTGAAAVVQIALPIAGTKG
KAAAAASAAEPGKRGLRWAVADATMLAGLADGSFAAVVDKACMDALVVEE
GDPWSPEPAVVATVHRMCAAVSRVLRPGGRFLQISFAQPHFRRKYLLGHH
LGLLPQPPPLASSGGDDCHRSGGGGSDGCASGDCGGGGARSSFDGVGPGE
CSSDAAGARDGEEAASGSAKARTDGACPYGWDLETHELRRGNGGCGYCVY
GMTKRRDA
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mRNA from alignment at P-wetherbeei_contig5714:1980..3734+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig5714.3.2 ID=mRNA_P-wetherbeei_contig5714.3.2|Name=mRNA_P-wetherbeei_contig5714.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1755bp|location=Sequence derived from alignment at P-wetherbeei_contig5714:1980..3734+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTGCTCTTCCTCTTCCAGCAGCAGCATCGGGAACAACGAACAAGA ATGGGAATCGCTGAGGGGCGAGCTGGGCGCAGAAGCTTTGGCAGCCCTCC AGGTGAAGCGACGCCATGGAACTTTTGGCAGAATGCGCGTGTTCTTTCCC CTCCATCCTGACTGGCCTGCGACAACGCGGCCTGCGTAATGCCATGCGTG ATTTTTCAAATTTACCAATGGACGATTCTCTCAATACACGATTCACCGAA ACAGGGCCATGGTGGTGCAACGCGAATGGACAATTGCCTCGAACACTCAG GCGCCGCTGCTAACGGCGATGGCATGAGCAGCCAACCTCCAGCAGCGGAG GAAGCTGTAACCACTCCCGCCATCACTGGTGCCGCCGCCGCCGCTGAAGA CTTGCGACCGGGGAGCAACGCACGCTATGGCCGCCATGATTACTGGGAGA AGCGCTTCACGGAGGAGGAGAGCTACGAATGGTGCGTTCCTCTTTTCGCA CTGGCTCAGTTCACGTTGTACTGGATTCGACGAAACGCATCGGCGCCTTG GCATTGTCTATCACAAGTGCAGCTCTCTTCTTTATCTGGCTATGCAATTG GCCTGCTAGCTCCCCCTCGTATTCCAACCAAAATACGCACATTGGTGAAC AAAGAACGTTTTCCTGTTCCCTTTGGGCTCCCAAATCCGCCCTTCGAACC GGCGCGGCAGGCTGGTGAGGTACGATGATGTGCGGGACGCGGTCCGTGCT GCGCTGCCGCCGGACATGGCCGTGCCGCTGCTCATCGTAGGCTGCGGCAA CTCGCGGCTCAGTGCTGCAATGTTTGCAGACGGTTACACGGATGTTCTCA GCACGGACTATTCTGCGACTGTCATCGCCGCCATGGCCGCGCGTCACGCC GACGCCGACGCCGACGCAGGAGCAGCAGCACCGGATGGTCTTGAAAGCCG CGGAGGCGCAGGCGGCGACGGCAGCGATGGCTCTGTCTCGATACAAGGAA CGTCGGTAGCAGCGGCGGCGGCGACGGAGCTGGCGGCAGCACTAGCAGCA TCGGCGGAGCCCACACCGGCAACCCCCACAGGAGCTGCAGCGGTAGTTCA AATAGCATTGCCAATTGCTGGAACGAAAGGGAAAGCGGCGGCTGCGGCGT CGGCAGCGGAGCCGGGAAAACGCGGCCTCCGGTGGGCGGTGGCCGACGCG ACGATGCTCGCCGGCCTCGCCGACGGTTCCTTCGCCGCCGTCGTCGACAA GGCATGCATGGACGCGCTGGTGGTGGAGGAAGGGGACCCGTGGTCACCAG AGCCAGCAGTGGTGGCGACAGTGCACCGCATGTGCGCGGCGGTGTCTCGC GTGCTGCGGCCGGGGGGGCGGTTTCTCCAGATCTCGTTCGCGCAGCCGCA CTTCCGGAGAAAGTACCTCTTGGGGCACCACCTGGGGCTCTTGCCGCAGC CGCCACCGCTGGCGTCCTCTGGCGGCGATGATTGCCACAGAAGCGGTGGC GGCGGAAGCGACGGCTGCGCAAGCGGCGACTGTGGAGGCGGCGGTGCTAG AAGTAGTTTTGACGGCGTCGGGCCAGGTGAATGCTCTTCCGACGCGGCAG GAGCCAGAGACGGAGAGGAAGCGGCATCGGGGTCGGCGAAAGCAAGGACG GACGGAGCTTGTCCCTACGGATGGGACCTGGAGACGCACGAGCTGCGGCG GGGGAACGGGGGCTGCGGCTACTGCGTATACGGAATGACGAAGCGAAGAG ACGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig5714:1980..3734+

>mRNA_P-wetherbeei_contig5714.3.2 ID=mRNA_P-wetherbeei_contig5714.3.2|Name=mRNA_P-wetherbeei_contig5714.3.2|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1374bp|location=Sequence derived from alignment at P-wetherbeei_contig5714:1980..3734+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGCGTGCTCTTCCTCTTCCAGCAGCAGCATCGGGAACAACGAACAAGA
ATGGGAATCGCTGAGGGGCGAGCTGGGCGCAGAAGCTTTGGCAGCCCTCC
AGGGCCATGGTGGTGCAACGCGAATGGACAATTGCCTCGAACACTCAGGC
GCCGCTGCTAACGGCGATGGCATGAGCAGCCAACCTCCAGCAGCGGAGGA
AGCTGTAACCACTCCCGCCATCACTGGTGCCGCCGCCGCCGCTGAAGACT
TGCGACCGGGGAGCAACGCACGCTATGGCCGCCATGATTACTGGGAGAAG
CGCTTCACGGAGGAGGAGAGCTACGAATGGCTGGTGAGGTACGATGATGT
GCGGGACGCGGTCCGTGCTGCGCTGCCGCCGGACATGGCCGTGCCGCTGC
TCATCGTAGGCTGCGGCAACTCGCGGCTCAGTGCTGCAATGTTTGCAGAC
GGTTACACGGATGTTCTCAGCACGGACTATTCTGCGACTGTCATCGCCGC
CATGGCCGCGCGTCACGCCGACGCCGACGCCGACGCAGGAGCAGCAGCAC
CGGATGGTCTTGAAAGCCGCGGAGGCGCAGGCGGCGACGGCAGCGATGGC
TCTGTCTCGATACAAGGAACGTCGGTAGCAGCGGCGGCGGCGACGGAGCT
GGCGGCAGCACTAGCAGCATCGGCGGAGCCCACACCGGCAACCCCCACAG
GAGCTGCAGCGGTAGTTCAAATAGCATTGCCAATTGCTGGAACGAAAGGG
AAAGCGGCGGCTGCGGCGTCGGCAGCGGAGCCGGGAAAACGCGGCCTCCG
GTGGGCGGTGGCCGACGCGACGATGCTCGCCGGCCTCGCCGACGGTTCCT
TCGCCGCCGTCGTCGACAAGGCATGCATGGACGCGCTGGTGGTGGAGGAA
GGGGACCCGTGGTCACCAGAGCCAGCAGTGGTGGCGACAGTGCACCGCAT
GTGCGCGGCGGTGTCTCGCGTGCTGCGGCCGGGGGGGCGGTTTCTCCAGA
TCTCGTTCGCGCAGCCGCACTTCCGGAGAAAGTACCTCTTGGGGCACCAC
CTGGGGCTCTTGCCGCAGCCGCCACCGCTGGCGTCCTCTGGCGGCGATGA
TTGCCACAGAAGCGGTGGCGGCGGAAGCGACGGCTGCGCAAGCGGCGACT
GTGGAGGCGGCGGTGCTAGAAGTAGTTTTGACGGCGTCGGGCCAGGTGAA
TGCTCTTCCGACGCGGCAGGAGCCAGAGACGGAGAGGAAGCGGCATCGGG
GTCGGCGAAAGCAAGGACGGACGGAGCTTGTCCCTACGGATGGGACCTGG
AGACGCACGAGCTGCGGCGGGGGAACGGGGGCTGCGGCTACTGCGTATAC
GGAATGACGAAGCGAAGAGACGCC
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