mRNA_P-wetherbeei_contig571.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig571.2.1
Unique NamemRNA_P-wetherbeei_contig571.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: A0A835YNL3_9STRA (Exostosin (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YNL3_9STRA)

HSP 1 Score: 249 bits (637), Expect = 5.360e-81
Identity = 116/195 (59.49%), Postives = 141/195 (72.31%), Query Frame = 1
Query:    1 YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLFAAASRPLVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLKGRYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV 585
            +TVR+NTFRRND L+RSVD++A C  V  IQ+VWSD  N PPP   F+ A+R L++FE+H  DSL+NRF   SPPPTE VFSVDDD++  C D+  A + WR A   MVGFVPRLVT D   G + YRSWW TWWNG YN++LTKA FLHR HL+AY   LP      +DA RNCED+AMS VVA++  APP+WV
Sbjct:    2 FTVRMNTFRRNDDLKRSVDNYALCPAVTRIQIVWSDQENEPPPLNFFSPAARELIEFELHTTDSLNNRFNALSPPPTEGVFSVDDDMLFKCEDLKFAHQTWRAASETMVGFVPRLVTRDEETGEHRYRSWWFTWWNGAYNLVLTKAAFLHRKHLDAYM-TLPPKMLAYVDAHRNCEDIAMSMVVARDTRAPPLWV 195          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: A0A6H5JBU8_9PHAE (GT64 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBU8_9PHAE)

HSP 1 Score: 229 bits (585), Expect = 1.120e-71
Identity = 115/195 (58.97%), Postives = 132/195 (67.69%), Query Frame = 1
Query:    1 YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLFAAASRPLVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLKGRYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV 585
            +TVR+NTFRRNDLL+RS +H A C  V +IQVVWSD  NAPP   LF   +R  V FEVH+ +SLS+RF   S   T+ VFS DDDL ISCAD+   FE WR ++  MVGF PRLVT D   GR+ YRSW V  WNG+YNVILTK CFLHRDHL  Y   +       ID  RNCED+AMS VVAK    PPVWV
Sbjct:   99 FTVRMNTFRRNDLLKRSAEHLASCDCVGQIQVVWSDQENAPPSMDLFTERTRRKVVFEVHDTNSLSHRFNVTSTLGTDGVFSTDDDLEISCADLKFGFETWRASQNTMVGFSPRLVTRDPGTGRHSYRSWRVVRWNGVYNVILTKCCFLHRDHLRTYVDEMTAPLLAYIDEHRNCEDIAMSVVVAKFHKTPPVWV 293          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: A0A7R9UDH5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UDH5_9STRA)

HSP 1 Score: 223 bits (567), Expect = 2.490e-69
Identity = 102/197 (51.78%), Postives = 140/197 (71.07%), Query Frame = 1
Query:    1 YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLFAAA-SRPLVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLKGRYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAA-PPVWV 585
            Y++R+NTFRRNDLL+RS++H+++C+ + +I VVWSD  N PP  + +    ++P V+FEVH  D LSNRF P   P TEA+ S+DDD+II C  ++ A EVW  A+ ++VGF PR+ TWD     Y YRSWW T+WNG Y+++LTK+ FLHR +LEA+ H LP +  D +D  RNCED+ M+FVVAK     PP+WV
Sbjct:   67 YSMRINTFRRNDLLRRSIEHYSKCSNIEDIIVVWSDQENPPPDISKWQLRPTKPHVEFEVHAVDRLSNRFKPLKMPATEAILSIDDDIIIRCEHLSRAMEVWESAKGSLVGFSPRMHTWDKQTRSYRYRSWWYTYWNGYYSIMLTKSAFLHRKYLEAF-HALPASLVDYVDGNRNCEDILMAFVVAKESGGKPPLWV 262          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: A0A835YPP3_9STRA (Glucuronyl/N-acetylglucosaminyl transferase EXT2 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPP3_9STRA)

HSP 1 Score: 213 bits (543), Expect = 4.700e-66
Identity = 98/195 (50.26%), Postives = 133/195 (68.21%), Query Frame = 1
Query:    1 YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLFAAASRPLVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLKGRYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV 585
            ++VRVNT++RN+ L+RSV+  A+C  V  + +VWS+  N PPP   FA  +RPL+  E H  +SL+NRF   + P TEAVFS+DDD++  C D+A AF+ W+ A+  MVGF PRLVT D   G++ YRSWW  W  G YN++LTKA F HRD+LE Y   L   AR  +DA RNC+D+AM+ ++A    APP+WV
Sbjct:   41 FSVRVNTYKRNENLKRSVEVVAKCPSVASLTIVWSEQENDPPPLDFFAPHARPLISVEKHTVNSLNNRFRALTQPTTEAVFSMDDDVLFRCQDLAFAFDTWKAAKGTMVGFHPRLVTLDRATGQHRYRSWWYVWRTGAYNMVLTKAAFFHRDYLETYFSVLSDEARAYVDATRNCDDVAMAALIAHVSGAPPIWV 235          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: UPI0019D67716 (glycosylinositol phosphorylceramide mannosyl transferase 1-like n=2 Tax=Panicum virgatum TaxID=38727 RepID=UPI0019D67716)

HSP 1 Score: 206 bits (524), Expect = 1.680e-62
Identity = 101/203 (49.75%), Postives = 136/203 (67.00%), Query Frame = 1
Query:    1 YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETL-----FAAASRPLVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLKG---RYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV 585
            ++V +NT+RR+ LL+RSV H+A CAGV  + VVWS+P   PPPETL          R  V+FE++E DSL+NRF P     T+AVFSVDDDLI+ C+ +  AF+VW+ A  AMVGFVPR+      +G    Y Y SWW  WW G Y+++L+KA F HR +L+ Y +N+  + R  +D  RNCED+AMSF+VA +  APP+WV
Sbjct:   94 FSVVINTWRRHALLRRSVAHYAACAGVEAVHVVWSEPR--PPPETLRRGVLVNGTRRGTVRFEINEADSLNNRFRPIRSLGTDAVFSVDDDLIVPCSTLRFAFDVWQSAPSAMVGFVPRMHWLADPRGSTKEYRYGSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNNMLPSIRKYVDENRNCEDIAMSFLVANHSGAPPIWV 294          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: F0YNH1_AURAN (Glyco_transf_64 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNH1_AURAN)

HSP 1 Score: 201 bits (512), Expect = 6.900e-61
Identity = 101/202 (50.00%), Postives = 131/202 (64.85%), Query Frame = 1
Query:    4 TVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLFAAASRP------LVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDS-LKGRYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPR--AARDLIDARRNCEDLAMSFVVAKNIAAPPVW 582
            +VRVNTFRRNDLL R V H+ RC    EI V+WSD A   PPE L   A R        V+ E+ + DSL+NRF     P T+A+FSVDDDLI+SC  + +  ++W  A R MVG  PRLV+ D+   G + Y  WW  WWNG Y+++LTK C LHRD+L+A++   P   +AR+ +D+RRNCEDL MSF+VA    APP+W
Sbjct:   69 SVRVNTFRRNDLLDRFVKHYERCGAAREIVVIWSD-AELAPPEWLVLRADRSPTADEVAVRVELFDVDSLNNRFKLLETPATDAIFSVDDDLIVSCEVLQNMIDIWASAPRQMVGVAPRLVSRDTNANGGWRYLRWWHVWWNGAYSLVLTKVCILHRDYLDAFSSRSPALVSAREHVDSRRNCEDLLMSFIVANATRAPPLW 269          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: UPI000DF4E4FF (glycosyltransferase family 64 protein C4 isoform X2 n=2 Tax=Panicum TaxID=4539 RepID=UPI000DF4E4FF)

HSP 1 Score: 201 bits (510), Expect = 1.070e-60
Identity = 99/203 (48.77%), Postives = 134/203 (66.01%), Query Frame = 1
Query:    1 YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPE-----TLFAAASRPLVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLKG---RYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV 585
            ++V +NT+RR+ LL+RSV H+A CAGV  + VVWS+P   PPPE      L     R  V+FE++E DSL+NRF P     T+AVFSVDDDLII C+ +  AF+VW+ A  AMVGFVPR+      +G    Y Y SWW  WW G Y+++L+KA F HR +L+ Y + +  + R+ ++  RNCED+AMSF+VA    APP+WV
Sbjct:   93 FSVVINTWRRHALLRRSVAHYAACAGVEAVHVVWSEPR--PPPEPLRRGVLINGTRRGTVRFEINEADSLNNRFRPIRGLATDAVFSVDDDLIIPCSTLRFAFDVWQSAPSAMVGFVPRMHWLADPRGSTKEYRYGSWWSVWWTGTYSMVLSKASFFHRQYLDLYTNQMLPSIRNYVNENRNCEDIAMSFLVANATGAPPIWV 293          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: A0A7S2W219_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2W219_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.970e-60
Identity = 108/259 (41.70%), Postives = 139/259 (53.67%), Query Frame = 1
Query:    1 YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLF--------------AAASRPLVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLKGRYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYA--------------------------------------------------HNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV 585
            YTVR+NTFRRNDLL++ V+ +A C  +H IQV+WSD A APPP + F              A+AS P+++FE+H  DSL+NRF P     T+AVFSVDDDL I C  +    +VWR A   MVGF+PR+  +D+L  R+ Y  WW  W +GLY+++LTKACFLHRD L AYA                                                  ++  RA  D +DA  NCED+AMSF+VA     P VWV
Sbjct:    5 YTVRINTFRRNDLLKKVVEQYATCPKIHSIQVIWSDLAAAPPPMSFFDLPNSYDQPSSYKSASASTPMIEFEIHTVDSLNNRFRPILDIATKAVFSVDDDLHIPCGLLDFTHQVWRAAPHTMVGFMPRMHGYDTLSRRFTYHDWWYVWRHGLYSMVLTKACFLHRDFLYAYAAVTKRPGLTTDMFVREPRITGRRLAPSSHGHRPRRRPRPAPSGTTPLAPENHTMRAVHDYVDAHMNCEDIAMSFLVANMSHEPAVWV 263          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: A0A6J1JG04_CUCMA (glycosyltransferase family 64 protein C4 n=4 Tax=Cucurbita TaxID=3660 RepID=A0A6J1JG04_CUCMA)

HSP 1 Score: 199 bits (507), Expect = 3.490e-60
Identity = 96/209 (45.93%), Postives = 133/209 (63.64%), Query Frame = 1
Query:    1 YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLFAAASRPL-----------VKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLK---GRYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV 585
            Y + +NT++R+DLL++SV H+  C GV  I +VWS+P   PPP++L A   R +           ++FE++EEDSL+NRF       T+A+FSVDDD+I +C+ +  AF VW+ A   MVGFVPR+   D  K   GRY Y  WW  WW G Y+++L+KA F H  +L  Y H++P + R+ +   RNCED+AMSFVVA    APPVWV
Sbjct:   67 YAILMNTWKRHDLLKQSVSHYTTCMGVESIHIVWSEPD--PPPDSLVAFLQRTVKENSRNDREIKLRFEMNEEDSLNNRFKEIKDLNTDAIFSVDDDVIFACSTLEFAFTVWQSASETMVGFVPRMHWIDQAKEEMGRYIYGGWWSVWWTGTYSMVLSKAAFFHSKYLGIYTHHMPASIRNYVTKNRNCEDIAMSFVVANVSGAPPVWV 273          
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Match: A0A0A0KQG7_CUCSA (Glyco_transf_64 domain-containing protein n=4 Tax=Cucumis TaxID=3655 RepID=A0A0A0KQG7_CUCSA)

HSP 1 Score: 197 bits (500), Expect = 4.890e-60
Identity = 94/203 (46.31%), Postives = 134/203 (66.01%), Query Frame = 1
Query:   13 VNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLFAAASRPL-----------VKFEVHEEDS-LSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEVWRGARRAMVGFVPRLVTWDSLKGRYDYRSWWVTWWNGLYNVILTKACFLHRDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV 585
            +NT++R+DLL++S+DH+  C GV  I +VWS+P+  PPP++L +   R +           ++FE++EEDS L+NRF       TEA+FSVDDD+I +C+ +  AF VW+ A   MVGFVPR+   D  KGRY Y  WW  WW+G Y+++L+KA F H  +L+ Y +++P + R  I   RNCED+AMSFVVA    +PPVWV
Sbjct:    1 MNTWKRHDLLKKSIDHYTACIGVESIHIVWSEPS--PPPDSLVSYLQRTVKANSRDGRETELRFEMNEEDSSLNNRFKEIKGLKTEAIFSVDDDVIFACSTLEFAFSVWQTAPHTMVGFVPRMHWIDRSKGRYRYGGWWSVWWSGTYSMVLSKAAFFHSKYLDFYTNHMPSSIRHYITNNRNCEDIAMSFVVANLSGSPPVWV 201          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig571.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YNL3_9STRA5.360e-8159.49Exostosin (Fragment) n=1 Tax=Tribonema minus TaxID... [more]
A0A6H5JBU8_9PHAE1.120e-7158.97GT64 protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A... [more]
A0A7R9UDH5_9STRA2.490e-6951.78Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A835YPP3_9STRA4.700e-6650.26Glucuronyl/N-acetylglucosaminyl transferase EXT2 n... [more]
UPI0019D677161.680e-6249.75glycosylinositol phosphorylceramide mannosyl trans... [more]
F0YNH1_AURAN6.900e-6150.00Glyco_transf_64 domain-containing protein n=1 Tax=... [more]
UPI000DF4E4FF1.070e-6048.77glycosyltransferase family 64 protein C4 isoform X... [more]
A0A7S2W219_9STRA1.970e-6041.70Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A6J1JG04_CUCMA3.490e-6045.93glycosyltransferase family 64 protein C4 n=4 Tax=C... [more]
A0A0A0KQG7_CUCSA4.890e-6046.31Glyco_transf_64 domain-containing protein n=4 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig571contigP-wetherbeei_contig571:8060..9560 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D7FUU9
Preferred nameEXTL2
PFAMsGlyco_transf_64
Model size588
Max annot lvl2759|Eukaryota
KEGG koko:K02366,ko:K02367,ko:K02369,ko:K02370,ko:K04794,ko:K19033
KEGG ReactionR05930,R05935,R05936,R10138,R10139
KEGG Pathwayko00534,ko01100,map00534,map01100
KEGG ModuleM00059
Hectar predicted targeting categoryother localisation
GOsGO:0001101,GO:0001888,GO:0003674,GO:0003824,GO:0005488,GO:0005539,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005783,GO:0005789,GO:0005794,GO:0005802,GO:0005975,GO:0005976,GO:0006040,GO:0006044,GO:0006073,GO:0006139,GO:0006629,GO:0006643,GO:0006665,GO:0006725,GO:0006793,GO:0006807,GO:0006950,GO:0006986,GO:0007154,GO:0007165,GO:0008150,GO:0008152,GO:0008194,GO:0008219,GO:0008375,GO:0008376,GO:0009225,GO:0009664,GO:0009719,GO:0009725,GO:0009737,GO:0009888,GO:0009987,GO:0010033,GO:0010087,GO:0010383,GO:0010393,GO:0010395,GO:0010400,GO:0010401,GO:0012505,GO:0016020,GO:0016043,GO:0016740,GO:0016757,GO:0016758,GO:0017144,GO:0019276,GO:0023052,GO:0030145,GO:0030243,GO:0030968,GO:0031410,GO:0031982,GO:0031984,GO:0032502,GO:0033554,GO:0033993,GO:0034620,GO:0034641,GO:0034976,GO:0035248,GO:0035251,GO:0035966,GO:0035967,GO:0036498,GO:0042175,GO:0042221,GO:0043167,GO:0043169,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044036,GO:0044042,GO:0044237,GO:0044238,GO:0044255,GO:0044260,GO:0044262,GO:0044264,GO:0044281,GO:0044422,GO:0044424,GO:0044425,GO:0044431,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045229,GO:0045488,GO:0046483,GO:0046527,GO:0046872,GO:0046914,GO:0047237,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051273,GO:0051716,GO:0052541,GO:0052546,GO:0055086,GO:0065007,GO:0070887,GO:0071310,GO:0071554,GO:0071555,GO:0071669,GO:0071704,GO:0071840,GO:0097305,GO:0097367,GO:0097708,GO:0098791,GO:0098827,GO:1901071,GO:1901135,GO:1901360,GO:1901564,GO:1901700
Exons3
Evalue1.04e-71
EggNOG OGsKOG1022@1|root,KOG1022@2759|Eukaryota
Ec32 ortholog descriptionGlycosyltransferase, family GT64
Ec32 orthologEc-06_001180.1
EC2.4.1.223,2.4.1.224,2.4.1.225,3.1.1.29
Descriptionglucuronosyl-N-acetylglucosaminyl-proteoglycan 4-alpha-N-acetylglucosaminyltransferase activity
Cds size588
COG categoryJ
CAZyGT47,GT64
BRITEbr01610,ko00000,ko00001,ko00002,ko01000,ko01003,ko03011,ko03012
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186847.486194-CDS-P-wetherbeei_contig571:8059..82211683186847.486194-CDS-P-wetherbeei_contig571:8059..8221Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig571 8060..8221 +
1683186847.497409-CDS-P-wetherbeei_contig571:8598..88711683186847.497409-CDS-P-wetherbeei_contig571:8598..8871Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig571 8599..8871 +
1683186847.5063174-CDS-P-wetherbeei_contig571:9407..95601683186847.5063174-CDS-P-wetherbeei_contig571:9407..9560Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig571 9408..9560 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig571.2.1prot_P-wetherbeei_contig571.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig571 8060..9560 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig571.2.1

>prot_P-wetherbeei_contig571.2.1 ID=prot_P-wetherbeei_contig571.2.1|Name=mRNA_P-wetherbeei_contig571.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp
YTVRVNTFRRNDLLQRSVDHFARCAGVHEIQVVWSDPANAPPPETLFAAA
SRPLVKFEVHEEDSLSNRFLPPSPPPTEAVFSVDDDLIISCADVAHAFEV
WRGARRAMVGFVPRLVTWDSLKGRYDYRSWWVTWWNGLYNVILTKACFLH
RDHLEAYAHNLPRAARDLIDARRNCEDLAMSFVVAKNIAAPPVWV*
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mRNA from alignment at P-wetherbeei_contig571:8060..9560+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig571.2.1 ID=mRNA_P-wetherbeei_contig571.2.1|Name=mRNA_P-wetherbeei_contig571.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1501bp|location=Sequence derived from alignment at P-wetherbeei_contig571:8060..9560+ (Phaeothamnion wetherbeei SAG_119_79)
TACACGGTGCGCGTCAACACATTCCGGCGCAACGACCTGCTGCAGCGGAG CGTCGACCACTTTGCGCGCTGCGCCGGCGTGCACGAGATCCAAGTGGTGT GGTCGGACCCCGCAAACGCGCCGCCACCGGAGACGCTTTTCGCCGCCGCG TCCCGCCCGCTGGTGAGTATGGGAGGCCCGGTTTTCTGGAATTTCCAGTT TTTTAACTCTCTTTTACACTCGAGGGTGTCCCTTTTCGCTTCGAGCGGAA TTGCTGCCCGAAGTAAGAGGCAATGGAGAGGACGGATAGTCCGAAAAAAA GGAATCTGTAGAGCTCTCTCAATTGCTTCTCTAGCCGCATCCGAATTAAG ATTACCGTCGGAACCTTCACATATATCATCCCATTTCGAACCTTTTCTTG AAGTTTTCACCATGCATGTTTCCTGTTACTGCCGGCGTGTAAATATGCAT TTTCCGCCTTGAACTTTCCGGTAGCTCCGCTGGATTTCCGTAATCGCTGT CTTCCGTTCTCTCCCTTTCCCCTCGCGAAACAAACACAGGTCAAATTCGA GGTGCACGAAGAGGACTCCCTCAGCAACCGCTTCCTCCCGCCATCGCCAC CGCCAACCGAGGCCGTCTTCTCTGTCGACGACGACCTGATCATCTCATGC GCCGACGTCGCCCACGCCTTCGAAGTCTGGCGCGGCGCGCGGCGAGCCAT GGTCGGTTTCGTGCCGCGGCTGGTGACGTGGGATAGCTTAAAGGGGCGGT ACGACTACCGGTCGTGGTGGGTCACGTGGTGGAACGGGCTGTACAATGTG ATTCTGACCAAGGTGAGCGCGAGAAAAGAGAGCAGCGAAGACTCAGTGTG ATAAAAAGAAAGCAGCAAAGAGTCAGGACGGTTTCGGTTCCGATTGCGTT GTTTTCTCAGAAGGGTTTTGGACCCAATTATGTTGTTTTGTCAGGGCTTC CTTGACTCTCGGCGCAGGGTCTGAAGAACGCAGAAGGTGGCGAAAAGCCG CCGGTAAGGGAGAGGCCGTTTTGTTAATTGGTACGGCGCCCAGTCTTCGT TCTTACGTTCGGGCAAAACAAGAGAGTATAGAACTAAAGTGTTGGTCTGA AACAACAATATAGTTGGCACTCTTGGGGATTATTACGAGCTATACAGACG GAGAACCTTGTGTGTGAAAAAGGTAGATTCTCAGATGGCCTCTCTGAGAT TGTTTTCCTTCTGTGTTTCCAAACCCGGTGTGGTCCTTGCAACGACACTT TACGCCATCATCACCATTGAACAAAGCCACAAATTCCCTTCGTCTTCCCC CGTCCTCTTTTTCCGCGCTCTATCTATCCTGGCTCTCTTACACAACAGGC GTGCTTCCTCCACCGCGACCACTTGGAAGCCTACGCGCATAACCTGCCGC GCGCCGCGCGCGATCTCATCGACGCGCGGCGGAACTGCGAGGACCTGGCC ATGTCCTTTGTCGTGGCAAAGAATATCGCCGCGCCGCCCGTCTGGGTTTG A
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Coding sequence (CDS) from alignment at P-wetherbeei_contig571:8060..9560+

>mRNA_P-wetherbeei_contig571.2.1 ID=mRNA_P-wetherbeei_contig571.2.1|Name=mRNA_P-wetherbeei_contig571.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig571:8060..9560+ (Phaeothamnion wetherbeei SAG_119_79)
TACACGGTGCGCGTCAACACATTCCGGCGCAACGACCTGCTGCAGCGGAG
CGTCGACCACTTTGCGCGCTGCGCCGGCGTGCACGAGATCCAAGTGGTGT
GGTCGGACCCCGCAAACGCGCCGCCACCGGAGACGCTTTTCGCCGCCGCG
TCCCGCCCGCTGGTCAAATTCGAGGTGCACGAAGAGGACTCCCTCAGCAA
CCGCTTCCTCCCGCCATCGCCACCGCCAACCGAGGCCGTCTTCTCTGTCG
ACGACGACCTGATCATCTCATGCGCCGACGTCGCCCACGCCTTCGAAGTC
TGGCGCGGCGCGCGGCGAGCCATGGTCGGTTTCGTGCCGCGGCTGGTGAC
GTGGGATAGCTTAAAGGGGCGGTACGACTACCGGTCGTGGTGGGTCACGT
GGTGGAACGGGCTGTACAATGTGATTCTGACCAAGGCGTGCTTCCTCCAC
CGCGACCACTTGGAAGCCTACGCGCATAACCTGCCGCGCGCCGCGCGCGA
TCTCATCGACGCGCGGCGGAACTGCGAGGACCTGGCCATGTCCTTTGTCG
TGGCAAAGAATATCGCCGCGCCGCCCGTCTGGGTTTGA
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