mRNA_P-wetherbeei_contig571.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: A0A836CR06_9STRA (RJL, ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CR06_9STRA) HSP 1 Score: 306 bits (784), Expect = 8.140e-103 Identity = 146/186 (78.49%), Postives = 161/186 (86.56%), Query Frame = 1
Query: 37 RKRSQGVEDLYTSTAQDAPQKKHWCARIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFELA 594
R+RS+G++DLYT+ A +APQKKHWC RIK+ISMG L GKSCLIKRFCEERFV+KYISTIGIDYGVKPVTV G+QVRVNFWDLSGHPDFFEIRNEFYKDSQGALLV+D R+SF EL W+ EAA+FGA G+PVVV ANKVDK+RAV EEEG WA RGYPYFETSA SGANVAAVF LFE A
Sbjct: 17 RRRSRGIDDLYTTRAAEAPQKKHWCVRIKIISMGSLATGKSCLIKRFCEERFVTKYISTIGIDYGVKPVTVRGQQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVFDVSRRESFEELQDWLSEAAKFGAQGMPVVVCANKVDKKRAVTEEEGQRWARERGYPYFETSANSGANVAAVFGRLFEAA 202
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: D7FUV0_ECTSI (RJL, Ras superfamily GTPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUV0_ECTSI) HSP 1 Score: 291 bits (744), Expect = 8.290e-97 Identity = 140/194 (72.16%), Postives = 159/194 (81.96%), Query Frame = 1
Query: 28 GMLRKRSQGVEDLYTSTAQDAPQKKHWCARIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFELALTHTR 609
G +R++S+GV+DLYTS A++APQKK WC R+K+ISMG LG GKSCLIKRFCEERFVSKYISTIGIDYGVKPVTV GE VR+NFWDLSGHPDFFEIRNEFYKDSQGA+LVYD +R SF EL+ W+ EAA FGA GIP+ V ANK+DKRR V EEEG WA G+ YFETSA SG NV A F +LFE AL +
Sbjct: 11 GGMRRKSKGVDDLYTSRAREAPQKKLWCVRMKIISMGALGVGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVNGESVRINFWDLSGHPDFFEIRNEFYKDSQGAVLVYDVANRASFEELEQWLVEAADFGAGGIPMAVCANKIDKRRVVSEEEGQRWAKDHGFTYFETSACSGVNVGASFSNLFEKALAQMK 204
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: A0A024TXM7_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TXM7_9STRA) HSP 1 Score: 237 bits (605), Expect = 6.270e-76 Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 1
Query: 115 RIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFELALTHTR 609
RIKVISMG G GKSC+IKR+CEE+FVSKYISTIGIDYGVKPV V G +VRVNFWDLSG P+F E+RNEFYKD+QGA+L++D SR SF LD W+KEAA++G P VV ANKVDK R V E+EGAAWA A+GY YFETSA++GANVA HLF+L + +
Sbjct: 26 RIKVISMGDGGVGKSCVIKRYCEEKFVSKYISTIGIDYGVKPVKVNGSEVRVNFWDLSGQPEFLEVRNEFYKDTQGAILMFDVSSRRSFEALDGWLKEAAKYGGGKFPCVVCANKVDKLRLVKEDEGAAWAAAKGYEYFETSAQTGANVAEALHHLFQLVVNRLK 190
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: A0A067C8I9_SAPPC (Uncharacterized protein (Fragment) n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067C8I9_SAPPC) HSP 1 Score: 235 bits (600), Expect = 3.720e-75 Identity = 116/193 (60.10%), Postives = 141/193 (73.06%), Query Frame = 1
Query: 31 MLRKRSQGVEDLYTSTAQDAPQKKHWCARIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFELALTHTR 609
M RK+S + + +DAP RIKVISMG G GKSC+IKR+CEE+FV+KYISTIGIDYGVKPV + G +VRVNFWDLSG P+F E+RNEFYKD+QG +L++D SR SF LDAW+KEAA+FG P VV NK+DK R V E+EG AWA ARGY Y+ETSA++GAN+A F LF +T TR
Sbjct: 1 MQRKKSSASNN--ATVEEDAPTSAPPVLRIKVISMGDGGVGKSCVIKRYCEEKFVAKYISTIGIDYGVKPVRIGGAEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILLFDVSSRRSFEGLDAWLKEAAKFGGGKFPCVVCGNKIDKIRVVSEDEGMAWARARGYEYYETSAQTGANIADAFHSLFMQVVTKTR 191
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: A0A485LT00_9STRA (Aste57867_25121 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LT00_9STRA) HSP 1 Score: 231 bits (589), Expect = 1.850e-73 Identity = 108/165 (65.45%), Postives = 133/165 (80.61%), Query Frame = 1
Query: 115 RIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFELALTHTR 609
RIKVISMG G GKSCLIKR+CEE+FVSKYISTIGIDYGVKPV + G +VRVNFWDLSG P+F E+RNEFYKD+QGA+L++D SR +F L++W+KEAA++G P VV ANK+DK R V E+EGAAWA+A+GY YFETSA++GANVA LF+L + +
Sbjct: 29 RIKVISMGDGGVGKSCLIKRYCEEKFVSKYISTIGIDYGVKPVKINGTEVRVNFWDLSGQPEFLEVRNEFYKDTQGAILIFDVSSRRTFDALESWLKEAAKYGGGKFPCVVCANKMDKTRVVSEDEGAAWASAKGYEYFETSAQTGANVAEALHCLFQLVVQRVK 193
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: A0A7S2C7J5_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C7J5_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.210e-72 Identity = 104/165 (63.03%), Postives = 131/165 (79.39%), Query Frame = 1
Query: 115 RIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFELALTHTR 609
R+K++SMGP G GKSCLIKRFCE+RFVSKYISTIG+DYGVKP TV G +++NFWDLSG P+FF++RNEFYKD+QG +LV+D + SF LD WV+EA ++G PVVV ANKVD +RA+ E EG WA + GY Y+ETSA+SGANV VF+++F+ AL TR
Sbjct: 9 RVKIMSMGPAGAGKSCLIKRFCEQRFVSKYISTIGVDYGVKPHTVDGNTLKMNFWDLSGQPEFFDVRNEFYKDAQGCVLVFDVTDQSSFDALDGWVQEAKKYGLKSAPVVVCANKVDLKRAITEREGREWAESYGYAYYETSAQSGANVNEVFEYMFDEALKRTR 173
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: A0A1V9YP76_9STRA (Ras family GTPase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YP76_9STRA) HSP 1 Score: 228 bits (580), Expect = 4.290e-72 Identity = 108/157 (68.79%), Postives = 124/157 (78.98%), Query Frame = 1
Query: 115 RIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLF 585
RIKVISMG G GKSCLIKR+CEE+FVSKYISTIGIDYGVKPV + G VRVNFWDLSG P++ E+RNEFYKD+QGALL++D SR SF LD W++EAA+FG P VV NK+DK R V E+EG WA ARGY YFETSA++GANVA Q LF
Sbjct: 29 RIKVISMGDGGVGKSCLIKRYCEEKFVSKYISTIGIDYGVKPVRIAGTDVRVNFWDLSGQPEYLEVRNEFYKDTQGALLLFDVSSRRSFESLDGWLREAAKFGGGKFPCVVCGNKIDKVRVVSEDEGKTWAKARGYEYFETSAQTGANVADALQTLF 185
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: W4GE15_9STRA (Uncharacterized protein n=4 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GE15_9STRA) HSP 1 Score: 227 bits (578), Expect = 8.350e-72 Identity = 105/165 (63.64%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 115 RIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFELALTHTR 609
RIKVISMG G GKSC+IKR+CEE+FV+KYISTIGIDYGVKPV + G +VRVNFWDLSG P+F E+RNEFYKD+QG +L++D SR +F LD W+KEAA++G P VV NKVDK R V E+E AAWA+++GY YFETSA++GANVA HLF L + +
Sbjct: 28 RIKVISMGDGGVGKSCVIKRYCEEKFVTKYISTIGIDYGVKPVKINGSEVRVNFWDLSGQPEFLEVRNEFYKDTQGGILMFDVSSRRTFDGLDGWLKEAAKYGGGKFPCVVCGNKVDKLRLVKEDEAAAWASSKGYEYFETSAQTGANVAEALHHLFHLVVARVK 192
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: A0A7S2R8X5_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2R8X5_9STRA) HSP 1 Score: 226 bits (575), Expect = 2.710e-71 Identity = 107/165 (64.85%), Postives = 129/165 (78.18%), Query Frame = 1
Query: 115 RIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGAAGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFELALTHTR 609
RIK+ S+GP GKSCLIKRFCE RFVSKYISTIG+DYGVKP TV G+QVRVNFWDLSGHPDFFE+RNEFYKD+QG +LVYDA +SF ++ A+++EA +FG +P V+ ANKVD RR V E+EG +A A G+ YFETSA SGANV VF+H+F + R
Sbjct: 31 RIKITSVGPQASGKSCLIKRFCESRFVSKYISTIGVDYGVKPHTVEGQQVRVNFWDLSGHPDFFEVRNEFYKDTQGLVLVYDASDANSFEDVAAYLQEARKFGVKSVPGVLCANKVDLRRQVSEDEGREFAAAHGFEYFETSAASGANVTEVFEHVFSAVVKSMR 195
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Match: A0A812YQF8_SYMMI (Dnajc27 protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812YQF8_SYMMI) HSP 1 Score: 222 bits (565), Expect = 7.070e-70 Identity = 103/160 (64.38%), Postives = 130/160 (81.25%), Query Frame = 1
Query: 115 RIKVISMGPLGCGKSCLIKRFCEERFVSKYISTIGIDYGVKPVTVLGEQVRVNFWDLSGHPDFFEIRNEFYKDSQGALLVYDAGSRDSFRELDAWVKEAARFGA--AGIPVVVVANKVDKRRAVLEEEGAAWATARGYPYFETSAESGANVAAVFQHLFE 588
RIK+++MG GKSCL+KR+CEERF+SKYI+TIG+DYGVKPV + G VRVNFWDLSGH +FFEIRNEFYKD+QG +LVYD +R++F+ELD W+ EA +FGA GIPVV+ ANKVDKRR V E+EG +AT++ + YFE SA SGANV +F+ LF+
Sbjct: 21 RIKILTMGGGNTGKSCLVKRYCEERFISKYIATIGVDYGVKPVQIDGVSVRVNFWDLSGHQEFFEIRNEFYKDAQGIILVYDVSTRETFQELDTWLNEAKKFGANIPGIPVVLCANKVDKRRVVSEDEGRQYATSKNFSYFEASASSGANVTEMFEQLFQ 180 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig571.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig571.1.1 >prot_P-wetherbeei_contig571.1.1 ID=prot_P-wetherbeei_contig571.1.1|Name=mRNA_P-wetherbeei_contig571.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=230bp MASLRRGMLRKRSQGVEDLYTSTAQDAPQKKHWCARIKVISMGPLGCGKSback to top mRNA from alignment at P-wetherbeei_contig571:5227..7431- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig571.1.1 ID=mRNA_P-wetherbeei_contig571.1.1|Name=mRNA_P-wetherbeei_contig571.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2205bp|location=Sequence derived from alignment at P-wetherbeei_contig571:5227..7431- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig571:5227..7431- >mRNA_P-wetherbeei_contig571.1.1 ID=mRNA_P-wetherbeei_contig571.1.1|Name=mRNA_P-wetherbeei_contig571.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=690bp|location=Sequence derived from alignment at P-wetherbeei_contig571:5227..7431- (Phaeothamnion wetherbeei SAG_119_79)back to top |