mRNA_P-wetherbeei_contig5707.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: A0A6H5LCV0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCV0_9PHAE) HSP 1 Score: 170 bits (431), Expect = 1.440e-45 Identity = 97/176 (55.11%), Postives = 122/176 (69.32%), Query Frame = 1
Query: 25 LEATGEARLEDVSQLLLRGQGLASFDAGCAARLGSLAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLA-TDALAALAAFAELRTLCLFRNRLENLPEALGAFRRLVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDRELAEF 549
L ATG+ RL + QL++RG L SF+ CAARL SL VLSLSNN++ L F L LVE+N+NFNA+ +LRGL C LRRLYLSNN +A T+ L ++ +LRTLCLF+N L NL AL RRL LRE+DLDGNPC+R GY+ V+R RL ELDGE + LDR+L++
Sbjct: 49 LAATGDHRLGGIRQLIIRGMRLTSFEPSCAARLRSLTVLSLSNNSLRDLESFRPLVNLVEVNVNFNAITSLRGLV-CPNLRRLYLSNNFIASTERLTV--SYPKLRTLCLFKNMLPNLASALEPLRRLSDLRELDLDGNPCSRSRGYKHRVIRCCPRLRELDGEELGQLDRDLSDL 221
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: A0A835YU35_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU35_9STRA) HSP 1 Score: 156 bits (395), Expect = 6.180e-41 Identity = 94/179 (52.51%), Postives = 118/179 (65.92%), Query Frame = 1
Query: 7 ITAELVLEATGEARLEDVSQLLLRGQGLASFDAGCAARLGS-LAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLENLPEALGAFRRLVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDREL 540
+T L LEATG+ LE +SQL+LR +G+ D CAAR+ + L LSLSNN++ SL + L L++LNLNFN++ +L+GL C GLRRLYLSNN L + A A AA L TLCL+ N L + AL R+L +LRE+DLDGNPC YR VRAL RL LDGE VT LD +L
Sbjct: 38 LTEALALEATGDDCLETISQLILRSRGITGLDGACAARMATTLTTLSLSNNSIRSLTALSPLVALLDLNLNFNSVFSLQGLA-CPGLRRLYLSNNRLTSVAGVA-AALPRLTTLCLYSNYLADRAAALAPLRQLPRLRELDLDGNPCCAAASYRHHAVRALPRLTLLDGEPVTPLDLDL 214
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: D7FUR1_ECTSI (Hypothetical leucine rich repeat protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUR1_ECTSI) HSP 1 Score: 151 bits (381), Expect = 7.460e-39 Identity = 87/160 (54.37%), Postives = 110/160 (68.75%), Query Frame = 1
Query: 73 LRGQGLASFDAGCAARLGSLAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLENLPEALGAFRR-LVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDRELAEF 549
+RG L SF+ CAARL SL VLSLSNN++ L F L LVE+N+NFNA+ +L GL C LRRLYLSNNL+A+ ++ + +LRTLCLF+N L NL AL RR L LRE+DLDGNPC+R GY+ V+R RL ELDGE + LDR+L++
Sbjct: 1 MRGMRLTSFEPSCAARLRSLTVLSLSNNSLRDLESFRPLVNLVEVNVNFNAITSLHGLV-CPNLRRLYLSNNLIASTERFTVS-YPKLRTLCLFKNMLPNLASALEPLRRSLADLRELDLDGNPCSRSRGYKHRVIRCCPRLRELDGEELGQLDRDLSDL 158
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: A0A7S1UGY0_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UGY0_9STRA) HSP 1 Score: 136 bits (343), Expect = 8.490e-37 Identity = 94/185 (50.81%), Postives = 118/185 (63.78%), Query Frame = 1
Query: 7 ITAELVLEATGEARLEDVSQLLLRGQGLAS-FDAGCAARLGSLAVLSLSNNAVSSLNH-FTSLTGLVELNLNFNALIN--LRGLERCG-GLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLEN-LPEALGAFRRLVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDRELA 543
IT LVL+ +GE LEDV L+LR +GL+ F +G A RL LA LSLS N + +L F + LVELNLNFN L + L L G GLRRL+LS+N L AA AELRTLCL+RN++E LP+ L +RL LR++DL GNPCA Y+ VV L R+ LDG+ VT+LDR+LA
Sbjct: 9 ITEALVLQESGEDALEDVEVLVLRNRGLSGGFASGVAERLPRLAALSLSGNGLGALGPAFRGIDSLVELNLNFNGLGDAALADLGAAGAGLRRLFLSHNALRGTGWAA--PLAELRTLCLYRNKIEGELPDVLAPLKRLRHLRDLDLGGNPCAAGPAYKHHVVTGLRRVATLDGDEVTALDRDLA 191
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: A0A6G0W9F8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W9F8_9STRA) HSP 1 Score: 142 bits (359), Expect = 1.200e-36 Identity = 83/178 (46.63%), Postives = 120/178 (67.42%), Query Frame = 1
Query: 7 ITAELVLEATGEARLEDVSQLLLRGQGLASFDAGCAARLGSLAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLENLPEALGAFRRLVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDREL 540
+TA L+LE G + +L+LR + + + CA L SL +LSLS+NA+ +L HF LT L+ELN+NFN + +L GL+ C GL++LY +NN L + +A L AF++L + ++ N L +L AL R+LVKLR VDLDGNPCAR + Y+ V+R L R+ ELDGE++ +LDRE+
Sbjct: 4 VTASLLLERAGIYEVLGTKELILRDEAIDELEETCAKDLVSLELLSLSHNALRTLTHFEHLTNLIELNINFNHVESLDGLQ-CYGLQKLYAANNKLTS--IAPLRAFSKLVHVSVYGNELSDLDAALHTCRQLVKLRSVDLDGNPCARTKHYKYQVLRLLPRINELDGETIHALDREM 178
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: T0RWJ6_SAPDV (Uncharacterized protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RWJ6_SAPDV) HSP 1 Score: 141 bits (356), Expect = 4.260e-36 Identity = 82/178 (46.07%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 7 ITAELVLEATGEARLEDVSQLLLRGQGLASFDAGCAARLGSLAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLENLPEALGAFRRLVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDREL 540
+TA+ ++ G L +L+LR +GLA D CA L +L +LSLS+NA++SL F L LVELN+NFN + +L L+ C GL++LY +NN +A+ LA L AF +L + +F N + +L AL + L+KL+ +DLDGNPCAR GY+ V+RAL RL LDG+ V +LDR+L
Sbjct: 7 LTADFLMSHAGLYDLGSTKELILRQEGLAEIDDACAQELSALELLSLSHNALTSLQGFAHLVNLVELNINFNQVTSLESLQ-CFGLQKLYAANNCIAS--LAPLRAFPKLSHISIFGNAILDLDAALHTCKHLLKLKSIDLDGNPCARLPGYKYHVLRALPRLRALDGDVVQALDRDL 181
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: A0A067CW58_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CW58_SAPPC) HSP 1 Score: 140 bits (352), Expect = 1.800e-35 Identity = 81/178 (45.51%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 7 ITAELVLEATGEARLEDVSQLLLRGQGLASFDAGCAARLGSLAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLENLPEALGAFRRLVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDREL 540
+TA+ ++ G L +L+LR +GLA D CA L +L +LSLS+NA++SL+ F L LVELN+NFN + +L L+ C GL++LY +NN +A+ LA L AF +L + +F N + +L AL + L+KL+ +DLDGNPCAR GY+ V+RAL RL LDG+ + +LDR+L
Sbjct: 7 LTADFLMAHAGIYDLGSTKELILRQEGLAEVDDACAQELSALELLSLSHNALTSLHGFAHLVNLVELNINFNQVTSLESLQ-CFGLQKLYAANNCIAS--LAPLRAFPKLSHISVFGNAILDLDAALHTCKHLLKLKSIDLDGNPCARLHGYKYHVLRALPRLRALDGDVLQALDRDL 181
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: A0A1W0A8E3_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8E3_9STRA) HSP 1 Score: 134 bits (338), Expect = 1.140e-33 Identity = 75/178 (42.13%), Postives = 119/178 (66.85%), Query Frame = 1
Query: 7 ITAELVLEATGEARLEDVSQLLLRGQGLASFDAGCAARLGSLAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLENLPEALGAFRRLVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDREL 540
I+ +L++E G +E++ +L+LR + + S + CA ++ SL +LSLS+N ++SL HF LT L+ELN+NFN + +L L+ C GL++LY +NN + ++ L +F +L + +F N L +L E R L+KL+ +DLDGNPCAR Y+ V+R+L RL LDG+++ +LDREL
Sbjct: 5 ISVDLLMELHGIYDIENMKELILRDETIDSLEQQCAKKMSSLELLSLSHNRLTSLEHFGYLTNLIELNVNFNRIESLELLQ-CFGLQKLYAANNCI--KSITPLRSFPKLIHISVFGNELTDLEEVFHTCRHLLKLKSIDLDGNPCARIPRYKYHVIRSLPRLRTLDGDNIQALDREL 179
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: A0A1V9YM38_9STRA (C3H1-type domain-containing protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YM38_9STRA) HSP 1 Score: 133 bits (335), Expect = 1.140e-32 Identity = 76/180 (42.22%), Postives = 118/180 (65.56%), Query Frame = 1
Query: 7 ITAELVLEATGEARLEDVSQLLLRGQGLASFDAGCAARLGSLAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLENLPEALGAFRRLVKLREVDLDGNPCARCEGYRPTVVRALSRLEELDGESVTSLDRELAE 546
++++ ++E G + +L+LR + + D CA L L +LSLS+NA++SL H+ LT L+ELN+NFN + +L L+ C GL++LY ++N + + +A+L +F +L + +F N + +L L R L+KL+ VDLDGNPC+R GY+ V+RAL RL LDG++V SLDREL E
Sbjct: 622 VSSDFLMEHLGVYDAPALKELILRDKHIDGIDEACAKELSGLELLSLSHNALTSLEHWGHLTNLIELNVNFNRIASLEPLQ-CFGLQKLYAASNQITS--IASLRSFPKLTHVSVFGNAILDLDATLHTCRNLLKLKSVDLDGNPCSRIPGYKYNVLRALPRLRALDGDTVQSLDRELCE 798
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Match: A0A225WYD8_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225WYD8_9STRA) HSP 1 Score: 120 bits (302), Expect = 2.270e-28 Identity = 73/175 (41.71%), Postives = 107/175 (61.14%), Query Frame = 1
Query: 25 LEATGEARLEDVSQLLLRGQGLASFDAGCAARLGSLAVLSLSNNAVSSLNHFTSLTGLVELNLNFNALINLRGLERCGGLRRLYLSNNLLATDALAALAAFAELRTLCLFRNRLENLPEALGAFRRLVKLREVDLDGNPCARCEG-YRPTVVRALSRLEELDGESVTSLDRELAE 546
+ G L + +L+LR + L D CA L SL +LSLS+N ++SL +F L+E+NLNFN + L L+ C GL +L+++NN + ++ L L T+ ++ NR+ +L AL R L KLR +DL GNPC+R G Y+ VVRALSRL+ LDG+ +T LD++L E
Sbjct: 1 MSRAGVYDLLTLKELILRDEELTQVDETCAQNLSSLEILSLSHNRLASLEYFQYFVNLIEINLNFNQIETLDNLQ-CAGLEKLFIANNQVVD--MSPLRKLLRLNTISVYGNRIADLDSALHTCRGLPKLRSLDLGGNPCSRDVGEYKFRVVRALSRLDTLDGDQITQLDKDLTE 172 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig5707.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig5707.1.1 >prot_P-wetherbeei_contig5707.1.1 ID=prot_P-wetherbeei_contig5707.1.1|Name=mRNA_P-wetherbeei_contig5707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=192bp MAITAELVLEATGEARLEDVSQLLLRGQGLASFDAGCAARLGSLAVLSLSback to top mRNA from alignment at P-wetherbeei_contig5707:315..1251- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig5707.1.1 ID=mRNA_P-wetherbeei_contig5707.1.1|Name=mRNA_P-wetherbeei_contig5707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=937bp|location=Sequence derived from alignment at P-wetherbeei_contig5707:315..1251- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig5707:315..1251- >mRNA_P-wetherbeei_contig5707.1.1 ID=mRNA_P-wetherbeei_contig5707.1.1|Name=mRNA_P-wetherbeei_contig5707.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=576bp|location=Sequence derived from alignment at P-wetherbeei_contig5707:315..1251- (Phaeothamnion wetherbeei SAG_119_79)back to top |