mRNA_P-wetherbeei_contig57044.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A348UQL7_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A348UQL7_9GAMM) HSP 1 Score: 84.0 bits (206), Expect = 2.470e-16 Identity = 56/131 (42.75%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 7 PAASTGSRRQHTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTA---SYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKLRVP 390
P +G +R T+R G+SLS IA + G V LR LN L S LR G L +P + R S + T S+D R T+ S S HVV +GD LW +AR YRVS ++L N + +TVL++GQ+LR+P
Sbjct: 338 PTTPSGEQRV-TIRPGDSLSAIARRHGTDVSTLRALNGLRSDFLRAGASLLVPGN--RSVSASARRTESRDARQQTSAARSAGRSESHVVRAGDTLWSLARAYRVSLQSLVVTNKLTPQTVLRIGQRLRIP 465
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A0U1P7G9_PHOLE (Putative membrane-bound lytic murein transglycosylase D n=15 Tax=Photobacterium TaxID=657 RepID=A0A0U1P7G9_PHOLE) HSP 1 Score: 84.0 bits (206), Expect = 2.660e-16 Identity = 48/117 (41.03%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 37 HTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTASYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKLRV 387
+TV++G+SL VIA + SV AL+++NHL S+H+R+GQ L++P S+ + N T+ K H+V GD LW IAR+Y S +LA+AN ++ + L+LGQKL+V
Sbjct: 344 YTVKSGDSLGVIAERHNTSVAALKQVNHLKSSHIRIGQKLKVPSSSTSLV-NVQHRTAIKQTH-----------HIVGPGDTLWAIARQYNTSVSSLAKANKLSTKATLRLGQKLKV 448
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A7Y8WP34_9BACI (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Bacillus sp. EB106-08-02-XG196 TaxID=2737049 RepID=A0A7Y8WP34_9BACI) HSP 1 Score: 79.3 bits (194), Expect = 1.150e-14 Identity = 48/118 (40.68%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 37 HTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTASYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKLRVP 390
+ V++GESLSVIA + V+V ++R NHL+S L++GQ L +PD G +T S+ +T +Y+ H +ASGDN+WD++ RY V L +AN + R++L +GQKL++P
Sbjct: 345 YAVKSGESLSVIAKQFDVTVDSIRAANHLNSDFLQVGQALTIPD---------GLNTPSQ-TGINTITYT---THTIASGDNIWDLSVRYGVPQADLLKANNLTTRSMLSVGQKLKIP 449
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A3B0WRV0_9ZZZZ (Membrane-bound lytic murein transglycosylase D n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0WRV0_9ZZZZ) HSP 1 Score: 79.0 bits (193), Expect = 1.560e-14 Identity = 40/117 (34.19%), Postives = 77/117 (65.81%), Query Frame = 1
Query: 31 RQHTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTASYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKL 381
++H ++ G++LS IA + VSV++L+++N+L S ++R G+ L +P S+++++D + + K + H H+V SGDN WD++R+Y+V + ++A+ NG+ + L+ GQKL
Sbjct: 369 KRHKIKQGQTLSHIAERYLVSVKSLKQINNLRSHNIRAGKYLVIPVSSRKLSDYNLTAYQRKKTLQNIRRKGHKVTHIVQSGDNFWDLSRKYKVKSHSIARWNGMAIKDPLRTGQKL 485
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: UPI001944F37A (Uncharacterized protein n=1 Tax=Demequina activiva TaxID=1582364 RepID=UPI001944F37A) HSP 1 Score: 78.6 bits (192), Expect = 1.970e-14 Identity = 50/132 (37.88%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 1 SAPAASTGSRRQHTVRAGESLSVIAAKAGVSVRALRELNHL-SSTHLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTASYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKLRVPG 393
SAPA ++ S HTV G+++ +A + G +V A+ N L SS +R+GQ L++P + D+ +S + H VA+GD +WD+ARRY VS A+A ANG+++R V+++GQKL +PG
Sbjct: 100 SAPAGASASGT-HTVATGDTVWDLARRYGTTVAAIVSANDLGSSAVIRVGQRLQVPGAAPSTVDSVAPGAASS-----------TGTHTVAAGDTVWDLARRYGVSVSAIANANGLDSRAVIRVGQKLEIPG 219
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A2N0XXY4_9VIBR (Lytic transglycosylase n=4 Tax=Vibrio TaxID=662 RepID=A0A2N0XXY4_9VIBR) HSP 1 Score: 78.2 bits (191), Expect = 2.840e-14 Identity = 51/124 (41.13%), Postives = 74/124 (59.68%), Query Frame = 1
Query: 34 QHTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQVLRLPDSNKR------VADNSGQSTSSKDRRTSTASYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKLRV 387
+H V++G++LSV+A K + + ++ N LSST + +GQ L +P S K ADN T SK R Y S H V SGDNLW IA++++VS ++LA+ NG+ R L++GQKL V
Sbjct: 341 RHQVKSGDTLSVLAKKYSTTTKVIQAANELSSTSIWVGQNLMIPTSTKNDTIYALSADNRLAKTQSKAR----GKYKFS--HTVVSGDNLWSIAKKHKVSHQSLAKWNGMGPRDTLRIGQKLVV 458
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A075NXC5_9ALTE (Lytic transglycosylase n=4 Tax=Alteromonas TaxID=226 RepID=A0A075NXC5_9ALTE) HSP 1 Score: 77.4 bits (189), Expect = 5.350e-14 Identity = 49/121 (40.50%), Postives = 75/121 (61.98%), Query Frame = 1
Query: 34 QHTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTASYSHSA---VHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKLRV 387
++TV++G+SLS IA+K +V ++++N L S +R+GQ + +P + K + S S +R +T + SA H V SGD LWDIAR+Y+VS + LA NG+ +LKLG+KL V
Sbjct: 364 RYTVKSGDSLSEIASKYHTTVNVVKQVNELKSNTIRVGQAIMVPVALKAL---DAYSLSQGERLAATQNTKRSAHKITHTVKSGDTLWDIARKYKVSTKKLASWNGMAPNDMLKLGKKLVV 481
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A512P9W3_9CELL (Uncharacterized protein n=1 Tax=Cellulomonas soli TaxID=931535 RepID=A0A512P9W3_9CELL) HSP 1 Score: 76.6 bits (187), Expect = 8.230e-14 Identity = 47/120 (39.17%), Postives = 72/120 (60.00%), Query Frame = 1
Query: 37 HTVRAGESLSVIAAKAGVSVRALRELNHLSS-THLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTASYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKLRVPG 393
HTVR G+++S IA++ G SV+A+ N L + +R GQVL +P + ++G + S TA+ S A H V +GD IARRY + AL QANG+++R ++++GQ L +PG
Sbjct: 110 HTVRTGDTVSAIASRYGTSVQAVVAANGLDARAFIRAGQVLTIPGTTAAAVASAGSTAS-------TAAVSTVANHTVVAGDTAGAIARRYGTTVTALVQANGLDSRALIRIGQSLSIPG 222
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A2E9DJZ6_9GAMM (Lytic transglycosylase n=2 Tax=Oceanospirillaceae TaxID=135620 RepID=A0A2E9DJZ6_9GAMM) HSP 1 Score: 76.6 bits (187), Expect = 9.140e-14 Identity = 52/125 (41.60%), Postives = 71/125 (56.80%), Query Frame = 1
Query: 7 PAASTGSRRQHTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTASYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKL 381
PA+ S ++T+R G++LS IA++ G +V ALR N+L S +R G+ L +P K + QS ++ R VH VASGDNLW+IARRY VS E LA NG+ L+ GQ L
Sbjct: 331 PASERVSWARYTIRRGDTLSAIASRFGTNVAALRTSNNLGSNRIRAGRTLLIPAGAK-----ARQSVDQQEER---------RVHRVASGDNLWNIARRYGVSTEQLADWNGITDVRALRPGQDL 441
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Match: A0A557SFW2_9GAMM (LysM peptidoglycan-binding domain-containing protein n=1 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A557SFW2_9GAMM) HSP 1 Score: 76.6 bits (187), Expect = 9.960e-14 Identity = 44/116 (37.93%), Postives = 70/116 (60.34%), Query Frame = 1
Query: 34 QHTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQVLRLPDSNKRVADNSGQSTSSKDRRTSTASYSHSAVHVVASGDNLWDIARRYRVSAEALAQANGVNARTVLKLGQKL 381
++ +R+G+SL IA K + L+++N L ++R G+ L +P S K++ + + + R+ +T + H V SGD LWDIARRY VS +ALA+ NG++ R L+LGQ L
Sbjct: 357 RYKIRSGDSLGAIARKHRTTTALLQQINKLKGNNIRAGKHLLIPVSTKQLDQYTHTADARLARKQNTKRSGNRITHQVQSGDTLWDIARRYNVSHQALARWNGISPRDTLRLGQTL 472 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57044.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57044.1.1 >prot_P-wetherbeei_contig57044.1.1 ID=prot_P-wetherbeei_contig57044.1.1|Name=mRNA_P-wetherbeei_contig57044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp SAPAASTGSRRQHTVRAGESLSVIAAKAGVSVRALRELNHLSSTHLRLGQback to top mRNA from alignment at P-wetherbeei_contig57044:15..407- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57044.1.1 ID=mRNA_P-wetherbeei_contig57044.1.1|Name=mRNA_P-wetherbeei_contig57044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig57044:15..407- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57044:15..407- >mRNA_P-wetherbeei_contig57044.1.1 ID=mRNA_P-wetherbeei_contig57044.1.1|Name=mRNA_P-wetherbeei_contig57044.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig57044:15..407- (Phaeothamnion wetherbeei SAG_119_79)back to top |