mRNA_P-wetherbeei_contig57.4.3 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: A0A836CM13_9STRA (Cytochrome b5 reductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM13_9STRA) HSP 1 Score: 382 bits (981), Expect = 4.360e-121 Identity = 204/351 (58.12%), Postives = 247/351 (70.37%), Query Frame = 3
Query: 891 LPPPVSPFLMLASLTACTLAAVAVLARIPLAMKAGGAIIGAAFRALGGVSRALKLEGTGAGTRYRLRLWLGSLQAWMDRAAGAWERAFGPEEAPLPAADWSVCTLQERIKVGQSYLRYRFRLPQPNSVLPLGLAQEVTLCGLDQGDRVVAGSFCPLSPRSAMGYLEILVKKDPEVNSP----------EQQLVRLLDVLAIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDFVLYSELENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDYLSRQGYPEEVIIAL 1913
+PPPV P L+ A+ T AVA+ AR+PL + A G A+ ++ + G RY LRL LGS QAWMD A+ RAFGPE+ LPA DWSVCTLQER++VG ++YRF+LP P VLPL L QE+TLCGLD RV + S PLSPR+A GY++++V K ++P RLL+ LAIG DE+A RPGR L YRGPY+PITDVV++A G G+VPMLQLV ELLP+RESSV AA+VVWLNE A+DF LY ELE FYKYHRKLDV+CIIERDLFGH LA N RVR+AVP F+IGTLAVV+GPD+FV KV+DYL RQGYP+EVII +
Sbjct: 1 MPPPVPPVLVGAATTLLVCLAVALAARVPLVLGALGRAAAGAWGGAAALAARANVGGALGDARYALRLALGSAQAWMDEVHAAFNRAFGPEDVMLPANDWSVCTLQERMRVGNGCVKYRFKLPGPACVLPLELGQELTLCGLDAAGRVASASCVPLSPRAAQGYVDVVVAKPRPPDAPLTAAGAAAVGGADFARLLETLAIG---DEVAARPGRAMLQYRGPYAPITDVVLIACGLGVVPMLQLVRELLPARESSVRAASVVWLNEAAEDFALYGELERAFYKYHRKLDVACIIERDLFGHALAGNRRVREAVPAFRIGTLAVVSGPDFFVAKVRDYLVRQGYPDEVIITV 348
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: D7FMW3_ECTSI (Cytochrome b5 reductase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMW3_ECTSI) HSP 1 Score: 337 bits (863), Expect = 1.500e-102 Identity = 193/369 (52.30%), Postives = 238/369 (64.50%), Query Frame = 3
Query: 864 LDVSLDRPVLPPPVSPFLMLASLTACTLAAVAVLARIPLAMKAGGA--------IIGAAFRALGGVSRALKLEGTGAGTRYRLRLWLGSLQAWMDRAAGAWERAFGPEEAPLPAADWSVCTLQERIKVGQSYL-RYRFRLPQ-PNSVLPLGLAQEVTLCGLDQGDRVVAGSFCPLSPRSAMGYLEILVKKDPE---------VNSPEQQLVRLLDVLAIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDFVLYSELENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDYLSRQGYPEEVIIAL 1913
L+VSLDR V+P PV P +M + TA L VAV ARIP + A G +G GV+ KL G RY R+W GSL +W R + W AFGPE LPA DWSVCTL E+++ G L RYRF LP P++VLPL L QE+TLCGLD ++VV G++ PL+PR G E++V K + ++ R LD L +G DE+AV+PGR GL Y G PITD+V+VA+G G+VPM+Q+V ELLPS SSV +A+VVWLNE+A+DF LYSELE F++ HRKLDVSCI+ERDLFG L AN V A PEFKIGTLA VAGPD+F RKV DYL R+GYPE+ II L
Sbjct: 71 LEVSLDRSVMPEPVVPPVMWGTTTAAFLGVVAVTARIPRLLGAVGKSSTVTVGNTLGPVATPAAGVAG--KLASAFPGLRYGARVWAGSLGSWASRRSQQWAEAFGPEAVVLPANDWSVCTLLEKVREGDGGLYRYRFGLPSSPDAVLPLELGQELTLCGLDASNQVVQGNYVPLTPRKQRGAFEVVVMKATDGAELDDGLPTTRSNREFSRFLDNLPLG---DEIAVKPGRAGLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIIGL 434
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: A0A6H5KGP4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGP4_9PHAE) HSP 1 Score: 204 bits (520), Expect = 3.110e-57 Identity = 103/162 (63.58%), Postives = 125/162 (77.16%), Query Frame = 3
Query: 1428 QQLVRLLDVLAIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDFVLYSELENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDYLSRQGYPEEVIIAL 1913
++ R LD L +G DE+AV+PGR L Y G PITD+V+VA+G G+VPM+Q+V ELLPS SSV +A+VVWLNE+A+DF LYSELE F++ HRKLDVSCI+ERDLFG L AN V A PEFKIGTLA VAGPD+F RKV DYL R+GYPE+ II+L
Sbjct: 20 REFSRFLDNLPLG---DEIAVKPGRARLVYGGANQPITDLVLVANGVGVVPMIQMVNELLPSSSSSVASASVVWLNEKAEDFALYSELEKAFFRNHRKLDVSCIVERDLFGSHLEANANVNAASPEFKIGTLAAVAGPDFFTRKVTDYLVRRGYPEDAIISL 178
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: A0A7S1XNN4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XNN4_9STRA) HSP 1 Score: 185 bits (470), Expect = 1.730e-47 Identity = 103/257 (40.08%), Postives = 149/257 (57.98%), Query Frame = 3
Query: 1143 ERAFGPEEAPLPAADWSVCTLQERIKVGQS--YLRYRFRLPQPNSVLPLGLAQEVTLCGLDQGDRVVAGSFCPLSPRSAMGYLEILVKKDPEVNSPEQQLVRLLDVLAIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDFVLYSELENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDYLSRQG-YPEEVI 1904
E F EE+ + +W CTL+ G S +L+YRF+L + LPL + Q VT+CGLD DRVV LSPR A GY E++V+ D + P LL VL+ A GDE+A + G Q L Y Y P+T VV + + GI+P L + ELLPS+E SV +VW+N++ DFV+Y E+E FYK+ +++DVSC+I+ D+ + +N V D+VP ++ G +A+VAG F + +L YP + I
Sbjct: 163 EGIFAGEESMVDPLEWFACTLESVNPAGDSEGWLKYRFKLKDKAASLPLDIGQGVTICGLDDDDRVVRMDMPLLSPRKARGYFEVVVRSDSD--EP------LLQVLSTLAPGDEIAAKCGPQRLDYTAEYQPVTSVVALVNADGILPALGVAQELLPSKEGSVETFNIVWVNDKEADFVMYDEVERLFYKFPKQMDVSCVIDEDIVSG-IDSNAAVLDSVPRWEPGAMAIVAGDPGFCSSARSFLEAVAEYPNDTI 410
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: A0A7S3KXF0_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3KXF0_9STRA) HSP 1 Score: 177 bits (448), Expect = 2.130e-44 Identity = 111/275 (40.36%), Postives = 155/275 (56.36%), Query Frame = 3
Query: 1143 ERAFGPEEA-PLPAAD----WSVCTLQERIKVGQS-YLRYRFRLPQPNSVLPLGLAQEVTLCGLDQGDRVVAGSFCPLSP--RSAMGYLEILVKKDPEVNSPEQQLVRLLDVLAIG---------ATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDF-VLYSELENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDYLSRQGYPEEVIIAL 1913
ER EE P+P + W V TL+ R ++G++ +++Y F LP+P+ VLPL L Q+V+LC LD V G F P SP ++ G +LV +PE+ +V LL + A GDE+A++PG L+YRG Y P+TD++ VA G GIVP+L+ +LP SSV A VVW+NE DF VL LE ++KY KL VSCI++ + N + AVP+FK GT+AV+AGP + K YL +GYP + I L
Sbjct: 162 ERVKPDEEGIPMPFEEGNEGWGVSTLRSRKRLGKTNFIQYEFELPEPDYVLPLELGQQVSLCCLDNEGNVARGDFFPFSPTGKTKPGSFSVLVPN----KTPEENIV-LLGLEAANFCRVVKQELKIGDEVAIKPGDTRLNYRGQYLPVTDILYVACGNGIVPVLEQARAVLPRGSSSVAAVTVVWINEETKDFDVLAEVLEKEYFKYSDKLAVSCIVDSPR-RRDWSDNNEINAAVPDFKQGTMAVLAGPTDLMEKAFYYLEDRGYPSDTICVL 430
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: A0A7S2A766_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2A766_9STRA) HSP 1 Score: 177 bits (450), Expect = 2.590e-44 Identity = 104/251 (41.43%), Postives = 148/251 (58.96%), Query Frame = 3
Query: 1188 WSVCTLQERIKVGQS-YLRYRFRLPQPNSVLPLGLAQEVTLCGLDQGDRVVAGSFCPLSPRSAMGYLEILVKKDPEVNSPEQQL------VRLLDVL-AIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDF-VLYSELENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDYLSRQGYPEEVIIAL 1913
W VC L+ + +G+S ++RY F LP+ + VLPL L Q +TLC LD+ D +V G+F + G I++ PE N E + + VL GDE+A++PG L+YRG Y P+TD+V VASG GIVP+L V +LPS SSV ++VW+N DF V +ELE ++KY+ KL VSCI E ++ L N + +AVP+F GT+AV++GP F K + YL +GYPE+ + L
Sbjct: 223 WGVCMLRSKEHIGRSPFVRYDFDLPRADYVLPLSLGQTITLCCLDESDNIVEGNFYTF--KEDTGTFSIVL---PEKNEEETEYDIGADRAKFAHVLKGEMGIGDEIALKPGVSTLNYRGQYLPVTDIVYVASGVGIVPILDQVKAVLPSGSSSVKGVSLVWINGDGKDFDVAINELEEEYFKYNTKLAVSCIGE-NVRKKALEENEEIEEAVPDFNPGTMAVISGPRAFSEKAKAYLKNRGYPEDCLCVL 467
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: B8CAB2_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CAB2_THAPS) HSP 1 Score: 176 bits (446), Expect = 5.420e-44 Identity = 100/259 (38.61%), Postives = 149/259 (57.53%), Query Frame = 3
Query: 1161 EEAPLPA---ADWSVCTLQERIKVGQSYLRYRFRLPQPNSVLPLGLAQEVTLCGLDQGDRVVAGSFCPLSPRSA-MGYLEILV-KKDPEVNSPEQQL--VRLLDVLAIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDFVL-YSELENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDYLSRQGYPEEVIIAL 1913
+ P+P W CTL+ + K+G ++ Y F LP+ + +PL L Q++ C L D VV+GSF P G + ++V +D + N+ L + ++VL GDE+A++PG+ L YRG P+TD+V +ASG GIVP++ V + P SSV +VVW+N++ DF L ELE+ + KY KL VSCI++ D+ + + N V +AVP F GT+AV++GP F K + YL R+GYPE I L
Sbjct: 187 KSTPMPFEGDGGWGKCTLKSKKKIGNTFTVYEFALPRSDYTVPLALGQQIDFCCLGLEDNVVSGSFYPYDMNDGERGVVRVVVPNQDAKGNAALVGLGSSKFIEVLHEMRQGDEVALKPGKTTLEYRGERVPVTDMVYIASGLGIVPIVDQVKAITPKGTSSVKVTSVVWINDQRSDFDLAMDELESEYTKYSTKLAVSCIMD-DVMKNPMEGNAEVEEAVPYFNAGTMAVISGPKRFSEKAKAYLMRKGYPENCICVL 444
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: B7FWJ3_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FWJ3_PHATC) HSP 1 Score: 174 bits (442), Expect = 1.240e-43 Identity = 107/281 (38.08%), Postives = 155/281 (55.16%), Query Frame = 3
Query: 1125 RAAGAWERAFGPEEA-PLPAAD-----WSVCTLQERIKVGQS-YLRYRFRLPQPNSVLPLGLAQEVTLCGLDQGDRVVAGSFCP--LSPRSAMGYLEILV------KKDPEVNSPEQQLVRLL--DVLAIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDFVLYSEL-ENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDYLSRQGYPEEVIIAL 1913
R WER +E P+P + W +CTL+ + ++G+S +++Y F LP+P+ VLPL L Q++++ LD V G F LS G IL + + S +R L DV GDE+A++PG LSYRG Y P+T +V +A G GIVP+L V +LP+ SSV + +VVW+NE A DF + +EL E +YKY +KL VSC+++ + L N V AVP+F GT+AV+AGP +K +L +GYP + I L
Sbjct: 151 RVQRVWERFQRVDEGIPMPFDEKANDGWGICTLKSKERLGKSNFMQYTFDLPEPDYVLPLDLGQQISMMCLDDDGDVAQGDFFSYNLSASPKPGSFTILFPTGSHEENTCSIGSSGANFLRALKQDV----KVGDEIALKPGPIKLSYRGQYLPVTGMVYIACGTGIVPVLDQVRAVLPADSSSVTSVSVVWINEEAKDFDVTAELLEKEYYKYSKKLAVSCVVDNTMQRQSLGDNTEVHAAVPDFTQGTMAVIAGPSDMAKKAIAFLENRGYPRDTICVL 427
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: A0A7S2FHA9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FHA9_9STRA) HSP 1 Score: 174 bits (441), Expect = 3.330e-43 Identity = 106/292 (36.30%), Postives = 157/292 (53.77%), Query Frame = 3
Query: 1080 YRLRLWLGSLQAWMDRAAGAWERAFGPEEAPLPAADWSVCTLQERIKV-GQSYLRYRFRLPQPNSVLPLGLAQEVTLCGLDQGDRVVAGSFCPLSPRSAMGYLE-ILVKKDPEV-----------NSPEQQLVRLLDVLAIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDFVLYSELENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKI-GTLAVVAGPDYFVRKVQDYLSRQGYPEEVIIAL 1913
+RL+L G + D W P+ L +W+ CTL + + G RY FRL LGL Q ++L G+D+ +RV+ P +PR G + IL +D E N+ E+ ++ + +G +++A +PG + L+Y G Y PI DV +ASG GIVP L L+ ELLPSR SSV A +VW+NE DFV Y ++EN +YK+ +KLDVSC+++ D FG +L N +VP+ + G + VVAGP+ F V L+ + +PE I+ L
Sbjct: 172 HRLKLLKGKGANFADSVRDTWTWVMPPQREQLGDGEWAACTLAGKTPITGSGCTRYSFRLNSARQTFGLGLGQALSLIGIDEANRVLKVHMIPATPRLMAGSFDLILPDEDIETKAQASRSLTASNAEEEGFGAMVQTMELG---EQIAAKPGDERLTYDG-YLPIDDVHCIASGLGIVPALGLLNELLPSRASSVETANLVWVNEDEGDFVNYVDMENVWYKFSKKLDVSCVLDNDTFGSELWENEAFIASVPDSYVEGMMIVVAGPENFQLNVAKELAAKDFPEGAIVCL 459
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Match: A0A7S3DPS7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S3DPS7_9STRA) HSP 1 Score: 169 bits (427), Expect = 5.280e-42 Identity = 103/273 (37.73%), Postives = 152/273 (55.68%), Query Frame = 3
Query: 1107 LQAWMDRAAGAWERAFGPEEAPLPAAD----WSVCTLQERIKVGQS-YLRYRFRLPQPNSVLPLGLAQEVTLCGLDQGDRVVAGSFCPLSPRSAM--GYLEILVKKDPEVNSPEQ---------QLVRLL-DVLAIGATGDELAVRPGRQGLSYRGPYSPITDVVMVASGPGIVPMLQLVTELLPSRESSVNAAAVVWLNERADDFVLYSEL-ENNFYKYHRKLDVSCIIERDLFGHQLAANPRVRDAVPEFKIGTLAVVAGPDYFVRKVQDY 1871
LQ ++R + W + P P+P D W VCTL+ R ++G++ ++++ F LPQP +PL L Q+V+LC LD V G+F P + S G IL + +S E VR++ + L IG DE+A+ PG LSY+G Y P+TD+V VA G GIVP+L + +LPS SSV++ VVW+N+ DF + +EL E ++KY KL VSCI+ + +AN + A+P+F GT+AV+AGP + K Y
Sbjct: 123 LQGRLERWSEKWRPS--PVSEPMPFEDENEGWGVCTLRARKRLGKTQFMQFDFELPQPEYTVPLDLGQQVSLCCLDNDGNVARGNFFPFTKESPAKPGSFSILAPNIDDSSSEETIFRIGLENANFVRVIKNELKIG---DEVALTPGSHRLSYKGQYLPVTDMVYVAYGTGIVPVLDQIRSVLPSGASSVSSVTVVWINDSTQDFDVVAELLEKEYFKYSEKLAVSCIVGKVQDTPDFSANDEINTAIPDFLQGTMAVLAGPKQIIEKATFY 390 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig57.4.3 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig57.4.3 >prot_P-wetherbeei_contig57.4.3 ID=prot_P-wetherbeei_contig57.4.3|Name=mRNA_P-wetherbeei_contig57.4.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=573bp MGNSVSVLVAAAALFAAHEADALVGLGPAPAVRLGALRPFHGAGRICCGGback to top mRNA from alignment at P-wetherbeei_contig57:3815..8389- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig57.4.3 ID=mRNA_P-wetherbeei_contig57.4.3|Name=mRNA_P-wetherbeei_contig57.4.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4575bp|location=Sequence derived from alignment at P-wetherbeei_contig57:3815..8389- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig57:3815..8389- >mRNA_P-wetherbeei_contig57.4.3 ID=mRNA_P-wetherbeei_contig57.4.3|Name=mRNA_P-wetherbeei_contig57.4.3|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1719bp|location=Sequence derived from alignment at P-wetherbeei_contig57:3815..8389- (Phaeothamnion wetherbeei SAG_119_79)back to top |