mRNA_P-wetherbeei_contig56994.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: A0A7V9VWJ8_9CHLR (Alpha/beta hydrolase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VWJ8_9CHLR) HSP 1 Score: 125 bits (313), Expect = 3.850e-34 Identity = 63/134 (47.01%), Postives = 87/134 (64.93%), Query Frame = 1
Query: 7 YAVMCQDEIPYIDEDAVMEAIEDADVSQAVID-DELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
Y+V+CQDE P+ E V + ADVS VI+ L+++ ++C WDL S I NEPV+S PTLIVTG +DPITPT G++ + L NA LVES +A H P+ TSG CGV+++ +FL +P +D +CL
Sbjct: 3 YSVLCQDETPFTSEAEVFAFAKSADVSDLVIEYGSLSTLTGIFDVCTRWDLPASSSIENEPVISGAPTLIVTGAYDPITPTSYGDVAMATLPNATLVESGIAGHDPLSTSGDCGVNVMHSFLINPAAVLDTTCL 136
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: A0A7V9VUH5_9CHLR (Alpha/beta fold hydrolase n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A7V9VUH5_9CHLR) HSP 1 Score: 126 bits (317), Expect = 1.040e-31 Identity = 66/134 (49.25%), Postives = 85/134 (63.43%), Query Frame = 1
Query: 7 YAVMCQDEIPYIDEDAVMEAIEDADVSQAVIDD-ELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
Y+V+CQDE P+ E V + ADVS VI+ L+++ ++C AWDL S I NEPVV D PTLI+TG +DPITPT GE + L NA LVES +A H P+ TSG CGV ++ +FL P +D SCL
Sbjct: 346 YSVLCQDETPFTSEAEVFAVAKSADVSDLVIEHGSLSTLTGIFDVCAAWDLAASPAIENEPVVGDAPTLIMTGTYDPITPTSYGEDAMATLPNATLVESGIAGHDPLSTSGDCGVSVMHSFLIDPEAVLDTSCL 479
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: A0A1F8LTS6_9CHLR (Uncharacterized protein n=1 Tax=Chloroflexi bacterium RBG_13_46_14 TaxID=1797618 RepID=A0A1F8LTS6_9CHLR) HSP 1 Score: 95.9 bits (237), Expect = 2.150e-20 Identity = 49/135 (36.30%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 1 LHYAVMCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
+HY+V C +E+P+ ++ + ++E+ + ++ L ++ IC+ W T I NEPV SDIPTLI++G FDPITP G+L + LTN+ E P H + + +C +DI + FL++P E D +CL
Sbjct: 376 MHYSVQCAEELPFSSQEEITASLEEYPEIREYLEGSLG--ESSLAICEYWTNTRPDPIENEPVPSDIPTLILSGEFDPITPPAWGKLASETLTNSWFFEFPGLGHDVLVSGTECPLDIALEFLDNPYSEPDRTCL 508
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: A0A7C3FYA1_9CHLR (Alpha/beta hydrolase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A7C3FYA1_9CHLR) HSP 1 Score: 95.9 bits (237), Expect = 2.150e-20 Identity = 49/135 (36.30%), Postives = 78/135 (57.78%), Query Frame = 1
Query: 1 LHYAVMCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
+HY+V C +E+P+ E+ + ++E + ++D L ++ +C+ W T + NEPV S IPTLI++G FDPITP G+L + LTN+ E P H + + +C VDI + FL++P E D +CL
Sbjct: 376 MHYSVQCNEELPFNSEEKIAASLEGHPDIREYLEDSLG--ESSLAVCEYWTNTIPDPVENEPVHSAIPTLILSGEFDPITPPAWGKLAAETLTNSRFFEFPGLGHDVLVSGNECPVDIALEFLDNPYSEPDRTCL 508
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: A5UX42_ROSS1 (TAP domain protein n=2 Tax=Roseiflexus sp. (strain RS-1) TaxID=357808 RepID=A5UX42_ROSS1) HSP 1 Score: 95.1 bits (235), Expect = 4.040e-20 Identity = 50/135 (37.04%), Postives = 79/135 (58.52%), Query Frame = 1
Query: 1 LHYAVMCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
+HY+V+C ++ + EDA +E V + D S++ Y E C W + P +EPVVSD+PTL+++GRFDPITP G+++ L+ A + P H+ V +S C I+ +FL++P ++ DASCL
Sbjct: 386 MHYSVICAEDADFTPEDAPLEG-----VRPFIALDARRSLEGYLERCAVWQVEPLEPFVDEPVVSDVPTLVLSGRFDPITPPAFGDVVARTLSRAYVYTFPDTGHAAVGSSA-CADTILASFLDNPSQQPDASCL 514
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: UPI0019E63C2D (Uncharacterized protein n=1 Tax=Chloroflexi bacterium AL-N15 TaxID=2686370 RepID=UPI0019E63C2D) HSP 1 Score: 91.3 bits (225), Expect = 8.960e-19 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 1
Query: 1 LHYAVMCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
++Y+V+C ++ D +E D+ + + L S+DA +ICD WD+ +EPV S+IPTL+++GRFDPITP EL L + L P H T G+C I+ AFLE P DA+C+
Sbjct: 373 MYYSVVCSEDADIDLTDLALE-----DIYPEIAESGLLSIDAITQICDLWDVEELSSSVDEPVSSEIPTLLLSGRFDPITPPAFAELAAGTLEQSYLFTFPTVGHGAA-TDGECSASIIFAFLEDPELPPDATCI 501
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: A0A2W4LQI0_9CHLR (Transporter (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2W4LQI0_9CHLR) HSP 1 Score: 90.9 bits (224), Expect = 1.170e-18 Identity = 49/135 (36.30%), Postives = 71/135 (52.59%), Query Frame = 1
Query: 1 LHYAVMCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
+ Y+V C +EI ++ E+ + A + + V D Y ICDAW + + NEPVVSD+PTL++ G +DP TP DG + LT +V E P H V G C + I +AFL +P D+SC+
Sbjct: 312 MFYSVRCHEEIAFLSEEELAAADDAFPQLRGVFD-----QSTYTPICDAWGAGAADPVENEPVVSDLPTLVLAGEYDPATPPEDGRIAAATLTRSVFFEFPGRGHG-VSADGGCPLQITLAFLRNPDAVPDSSCI 440
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: UPI001C900DF8 (alpha/beta fold hydrolase n=1 Tax=Modestobacter lapidis TaxID=1608613 RepID=UPI001C900DF8) HSP 1 Score: 90.5 bits (223), Expect = 1.650e-18 Identity = 48/132 (36.36%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 10 AVMCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
AV CQ+E+P+ E V A +D + + + ++C WD GE NEP+VS+IPTL++ G DPITP GE + D+L N+ PV H V +C V + AFL+ P DA+C+
Sbjct: 370 AVQCQEEVPFSSEQTVAAAADDHPLVEGFFESAPTLGAGIFDVCATWDAGEPGEAENEPLVSEIPTLVLAGDLDPITPPRWGESISDDLPNSFFFSFPVTGHGSVAVH-ECAVQLTSAFLDDPGAAPDAACI 500
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: A0A7S8ECI9_9CHLR (Alpha/beta hydrolase n=1 Tax=Phototrophicus methaneseepsis TaxID=2710758 RepID=A0A7S8ECI9_9CHLR) HSP 1 Score: 89.0 bits (219), Expect = 4.970e-18 Identity = 48/135 (35.56%), Postives = 73/135 (54.07%), Query Frame = 1
Query: 1 LHYAVMCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
++ AV C DEI +++ ++ ++ + + +D L +A ++C W + E+ NEPV SDIPTL++ G +DPITP EL LTN L E P H+ +SG CG I + FL P D++CL
Sbjct: 336 MYQAVQCYDEISFLEPESFIKIRDTFPQYASTLDRMLTQHEALLDVCTGWQPVRAAELENEPVRSDIPTLLLVGEYDPITPPAWAELAAQTLTNGYLYEVPGVGHAVTFSSG-CGQQIALRFLWEPSTAPDSACL 469
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Match: A7NM62_ROSCS (TAP domain protein n=2 Tax=Roseiflexus castenholzii TaxID=120962 RepID=A7NM62_ROSCS) HSP 1 Score: 89.0 bits (219), Expect = 5.780e-18 Identity = 48/135 (35.56%), Postives = 77/135 (57.04%), Query Frame = 1
Query: 1 LHYAVMCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSGEIANEPVVSDIPTLIVTGRFDPITPTFDGELLLDNLTNAVLVESPVASHSPVQTSGQCGVDIVVAFLEHPRKEVDASCL 405
+HYAV+C ++ + EDA ++ V + D S++ Y E C+ W + + +EPV SDIPTL+++GRFDPITP G+++ L+ A + P H V +S C I+ AFL++P + D+SC+
Sbjct: 391 MHYAVICAEDADFTPEDAPLQG-----VRPFIALDGRRSLEGYLERCNIWQVDQLAPVVDEPVSSDIPTLVLSGRFDPITPPEFGDVVARTLSRAYVYTFPDTGHGAVGSSA-CADTILKAFLDNPSQPPDSSCI 519 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56994.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56994.1.1 >prot_P-wetherbeei_contig56994.1.1 ID=prot_P-wetherbeei_contig56994.1.1|Name=mRNA_P-wetherbeei_contig56994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp MCQDEIPYIDEDAVMEAIEDADVSQAVIDDELASMDAYAEICDAWDLTPSback to top mRNA from alignment at P-wetherbeei_contig56994:110..514- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56994.1.1 ID=mRNA_P-wetherbeei_contig56994.1.1|Name=mRNA_P-wetherbeei_contig56994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig56994:110..514- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56994:110..514- >mRNA_P-wetherbeei_contig56994.1.1 ID=mRNA_P-wetherbeei_contig56994.1.1|Name=mRNA_P-wetherbeei_contig56994.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig56994:110..514- (Phaeothamnion wetherbeei SAG_119_79)back to top |