mRNA_P-wetherbeei_contig56990.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: UPI001C3CE0D0 (ribulose-phosphate 3-epimerase n=1 Tax=Miltoncostaea marina TaxID=2843215 RepID=UPI001C3CE0D0) HSP 1 Score: 284 bits (727), Expect = 2.330e-95 Identity = 144/171 (84.21%), Postives = 154/171 (90.06%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPFADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
VLPSVMSADML LGAQL +L+AAGA HVDVMDGHFVPNLTVGPDF RA A + AGGLVDVHLMV+RPAEM+PLFAP ADAITVHVEADPHPHRLLG+IR+AGC AGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQ+FIATTP RIARLRAL+ D + IEVDG
Sbjct: 11 VLPSVMSADMLALGAQLDALIAAGAGAIHVDVMDGHFVPNLTVGPDFARAAAGPVRAAGGLVDVHLMVSRPAEMVPLFAPHADAITVHVEADPHPHRLLGLIRDAGCAAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQSFIATTPARIARLRALLPDGLPIEVDG 181
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: UPI001C3E3E59 (ribulose-phosphate 3-epimerase n=1 Tax=Miltoncostaea oceani TaxID=2843216 RepID=UPI001C3E3E59) HSP 1 Score: 275 bits (702), Expect = 1.440e-91 Identity = 139/171 (81.29%), Postives = 151/171 (88.30%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPFADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
VLPSVMSADML LG Q+A+L AGA+ HVDVMDG FVPNLTVGPD+TRA+A + H AG LVDVHLMVARP EMIPLFAP+ADAITVHVEADPHPHRLLG+IREAGC AGLALNPGTPVEHVAELA ELDYVNVLAV+PGFAGQ+FI + P RIARLR L+ D VVIEVDG
Sbjct: 11 VLPSVMSADMLALGDQVAALAGAGARAFHVDVMDGAFVPNLTVGPDWTRALAGVAHAAGALVDVHLMVARPGEMIPLFAPYADAITVHVEADPHPHRLLGVIREAGCHAGLALNPGTPVEHVAELADELDYVNVLAVDPGFAGQSFITSAPRRIARLRELLPDRVVIEVDG 181
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: A0A538A501_9ACTN (Ribulose-phosphate 3-epimerase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538A501_9ACTN) HSP 1 Score: 198 bits (503), Expect = 3.640e-61 Identity = 102/172 (59.30%), Postives = 127/172 (73.84%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPF-ADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
V PS++SAD LGAQ+A +MAAGA++ HVDVMDGHFVP +T+GP ++A+ +H AGG +DVHLM+ RPA+ + FA AD IT H EAD H HR LG IREAGC AGLALNPGTP E V EL G D V ++VNPG+ GQAFIA++PD+++RLR L + IEVDG
Sbjct: 22 VAPSILSADFSKLGAQIADVMAAGARLIHVDVMDGHFVPPITIGPLVAGSIADQVHQAGGALDVHLMIERPADQVAEFARAGADCITFHFEADAHAHRTLGAIREAGCLAGLALNPGTPAESVTELTGSADVVLCMSVNPGWGGQAFIASSPDKVSRLRRL-APGARIEVDG 192
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: A0A1Q7WXF8_9ACTN (Ribulose-phosphate 3-epimerase n=1 Tax=Actinobacteria bacterium 13_1_20CM_3_68_9 TaxID=1803475 RepID=A0A1Q7WXF8_9ACTN) HSP 1 Score: 193 bits (491), Expect = 1.760e-59 Identity = 101/172 (58.72%), Postives = 124/172 (72.09%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPF-ADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
V PS++SAD LGAQ+A +MAAGA++ HVDVMDGHFVP +T+GP A+A+ +H AGG +DVHLM+ RPA+ I FA AD IT H EAD H HR LG IREAGC AGLALNPGTP E V EL D + ++VNPG+ GQ FIA++PD+++RLR L IEVDG
Sbjct: 12 VAPSILSADFSRLGAQVAEVMAAGARLIHVDVMDGHFVPPITIGPLVAGAIADQVHQAGGAIDVHLMIERPADQIAEFARAGADCITFHFEADAHAHRTLGGIREAGCLAGLALNPGTPAESVVELTESADVILCMSVNPGWGGQPFIASSPDKVSRLRRLAPAPA-IEVDG 182
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: A0A7Y5XU04_9ACTN (Ribulose-phosphate 3-epimerase n=1 Tax=Thermoleophilia bacterium TaxID=2026888 RepID=A0A7Y5XU04_9ACTN) HSP 1 Score: 191 bits (486), Expect = 1.010e-58 Identity = 98/172 (56.98%), Postives = 121/172 (70.35%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPF-ADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
V PS++SAD LG Q+ ++ AGA V HVDVMDGHFVP +T+GP A+AE +H AG +VDVHLM+ RP + FA AD IT+HVEA PH H L +R+AGCRAG+ALNPGTP E V+ +AG+ D V + VNPG+ GQ F+ T+P RI RLRAL D VIEVDG
Sbjct: 7 VAPSILSADFARLGEQVGEVLEAGATVIHVDVMDGHFVPPITMGPLVVGAIAEQVHAAGAVVDVHLMIERPERHVQAFADAGADGITLHVEATPHVHYALQAVRDAGCRAGVALNPGTPPEAVSAVAGDCDLVLCMTVNPGWGGQRFLETSPGRIERLRALSGPDTVIEVDG 178
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: A0A7V9HC82_9ACTN (Ribulose-phosphate 3-epimerase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A7V9HC82_9ACTN) HSP 1 Score: 191 bits (484), Expect = 2.840e-58 Identity = 103/185 (55.68%), Postives = 127/185 (68.65%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPF-ADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDD-------------VVIEVDG 513
V PS++SAD LGAQ+A +MAAGA+V HVDVMDGHFVP +T+GP A+++ +H AGG +DVHLM+ RP + FA AD+IT+HVEA PH H LG IR+AGCRAGLA+ PGTPVE V+ +A ELD V + VNPG+ GQ FIA +P RI RLRALV V+EVDG
Sbjct: 6 VAPSILSADFARLGAQVAEVMAAGAKVIHVDVMDGHFVPPITMGPMVVDALSQAVHDAGGALDVHLMIERPERQVADFAKAGADSITIHVEATPHVHYALGAIRDAGCRAGLAICPGTPVEAVSGVAAELDLVLCMTVNPGWGGQPFIAGSPARIQRLRALVEPSDRSDPEAEPQCGSAVVEVDG 190
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: A0A6J4RW42_9ACTN (Ribulose-phosphate 3-epimerase n=1 Tax=uncultured Solirubrobacteraceae bacterium TaxID=1162706 RepID=A0A6J4RW42_9ACTN) HSP 1 Score: 187 bits (476), Expect = 3.400e-57 Identity = 97/172 (56.40%), Postives = 122/172 (70.93%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPF-ADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
V PS+++AD LGAQ+ ++AAGA+V HVDVMDGHFVP +T+GP A+A+ +H AG L+DVHLM+ RP I FA AD+IT+HVEA P+ H L IRE+GCRAGLALNPGT E VA LA ++D + VNPG+ GQAFI + R+ RLR LV DV +EVDG
Sbjct: 7 VAPSILAADFARLGAQVEEVLAAGARVIHVDVMDGHFVPPITMGPIVVAALADTVHAAGALLDVHLMIERPERQIAEFASAGADSITIHVEATPNVHYALKAIRESGCRAGLALNPGTAPELVAPLAADVDLALAMTVNPGWGGQAFIGGSERRVRRLRELVGSDVAVEVDG 178
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: A0A538ERJ9_9ACTN (Ribulose-phosphate 3-epimerase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538ERJ9_9ACTN) HSP 1 Score: 187 bits (475), Expect = 4.270e-57 Identity = 92/172 (53.49%), Postives = 123/172 (71.51%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPF-ADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
V PS++SAD LG Q+ ++M AGA+V H DVMDGHFVP +T+GP A+A+ +HGAGGL+DVHLM+ RP + FA AD IT H EA PH H + IREAGC+AG+A+NPGTP E ++E+AG +D ++VNPG+ GQ FI +P ++ R+R +V DVV+EVDG
Sbjct: 11 VAPSILSADYARLGDQVRTVMEAGARVIHCDVMDGHFVPPITIGPLIVGAIADEVHGAGGLLDVHLMIERPEHQVREFARAGADNITFHYEATPHVHYTVNTIREAGCQAGVAINPGTPAETLSEIAGHVDLALCMSVNPGWGGQRFIPASPGKLERVRGVVGADVVVEVDG 182
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: A0A8I1T6S4_9ACTN (Ribulose-phosphate 3-epimerase n=1 Tax=Solirubrobacterales bacterium TaxID=1909295 RepID=A0A8I1T6S4_9ACTN) HSP 1 Score: 184 bits (466), Expect = 1.510e-55 Identity = 92/172 (53.49%), Postives = 122/172 (70.93%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPF-ADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
+ PS++SAD LGAQ+A +M AGA+V H DVMDG FVP +T+GP +A+ +H AGG+VDVHLM+ P FA AD+I H EA PH HR +RE GC AG+A+NPGTPVE ++EL G +D V V+ VNPG+ GQ FI T+PD++ R+R+L+ +DV+IEVDG
Sbjct: 21 IAPSILSADFGRLGAQIAEVMDAGAKVIHFDVMDGQFVPPITIGPLVLSGIADQVHDAGGVVDVHLMIEDPDRQFEDFAKAGADSIIFHEEATPHAHRCCHRVRELGCLAGVAINPGTPVEALSELEGMVDEVLVMTVNPGWGGQPFIETSPDKVRRMRSLLGEDVLIEVDG 192
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Match: A0A537ZXF8_9ACTN (Ribulose-phosphate 3-epimerase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZXF8_9ACTN) HSP 1 Score: 182 bits (462), Expect = 4.630e-55 Identity = 95/172 (55.23%), Postives = 122/172 (70.93%), Query Frame = 1
Query: 1 VLPSVMSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILHGAGGLVDVHLMVARPAEMIPLFAPF-ADAITVHVEADPHPHRLLGMIREAGCRAGLALNPGTPVEHVAELAGELDYVNVLAVNPGFAGQAFIATTPDRIARLRALVSDDVVIEVDG 513
V PS++SAD LGAQ+ +MAAGA+V HVDVMDGHFVP +T+GP ++A+ +H AGG +DVHLM+ RPA+ + FA AD IT H EADPH R LG IREAGC AG+A+NPGTP V EL D V ++VNPG+ GQ+FIA++P ++ R+R V V IE+DG
Sbjct: 12 VAPSILSADFSRLGAQVEEVMAAGARVIHVDVMDGHFVPPITMGPLIAGSIADQVHEAGGAIDVHLMIDRPADHVAEFAKIGADCITAHFEADPHISRTLGAIREAGCLAGVAINPGTPATAVGELNEYADLVLCMSVNPGWGGQSFIASSPGKVRRIREAVPSPV-IEMDG 182 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56990.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56990.1.1 >prot_P-wetherbeei_contig56990.1.1 ID=prot_P-wetherbeei_contig56990.1.1|Name=mRNA_P-wetherbeei_contig56990.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp MSADMLDLGAQLASLMAAGAQVAHVDVMDGHFVPNLTVGPDFTRAVAEILback to top mRNA from alignment at P-wetherbeei_contig56990:2..514- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56990.1.1 ID=mRNA_P-wetherbeei_contig56990.1.1|Name=mRNA_P-wetherbeei_contig56990.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=513bp|location=Sequence derived from alignment at P-wetherbeei_contig56990:2..514- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56990:2..514- >mRNA_P-wetherbeei_contig56990.1.1 ID=mRNA_P-wetherbeei_contig56990.1.1|Name=mRNA_P-wetherbeei_contig56990.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig56990:2..514- (Phaeothamnion wetherbeei SAG_119_79)back to top |