mRNA_P-wetherbeei_contig56910.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: I4EQJ2_9ACTN (Uncharacterized protein n=1 Tax=Modestobacter marinus TaxID=477641 RepID=I4EQJ2_9ACTN) HSP 1 Score: 111 bits (278), Expect = 4.810e-30 Identity = 61/96 (63.54%), Postives = 64/96 (66.67%), Query Frame = 1
Query: 1 QILVGEFDPGSGRTLAACLTHASRTRSIQ---PSGERVRNT*GTCPGLWDNSWKRLLIPDDVGAPHGALTKGLPDRESLAAYQLVGGVMAYQGIDG 279
QI+ GEFDPGSGRTLAACLTHASR R PSGERV NT TCP LWDNS K +LIPD K + AAYQLVGGVMAYQG DG
Sbjct: 10 QIIYGEFDPGSGRTLAACLTHASRARPSFGGCPSGERVSNTWATCPQLWDNSKKLVLIPDVTADRMVWWWKDSSAEDGPAAYQLVGGVMAYQGDDG 105
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: UPI0019C2A9C4 (Uncharacterized protein n=1 Tax=Streptomyces albospinus TaxID=285515 RepID=UPI0019C2A9C4) HSP 1 Score: 72.0 bits (175), Expect = 8.730e-15 Identity = 36/63 (57.14%), Postives = 39/63 (61.90%), Query Frame = 1
Query: 91 SGERVRNT*GTCPGLWDNSWKRLLIPDDVGAPHGALTKGLPDRESLAAYQLVGGVMAYQGIDG 279
SGERV NT CP LWD WKR LIPD + K ++ AAYQLVGGVMAYQG DG
Sbjct: 9 SGERVSNTWAICPSLWDKPWKRGLIPDMTHGGISCVWKAPAVKDEPAAYQLVGGVMAYQGDDG 71
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: A0A1B6AVX8_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces sp. NBRC 110611 TaxID=1621259 RepID=A0A1B6AVX8_9ACTN) HSP 1 Score: 71.2 bits (173), Expect = 1.760e-14 Identity = 36/63 (57.14%), Postives = 40/63 (63.49%), Query Frame = 1
Query: 91 SGERVRNT*GTCPGLWDNSWKRLLIPDDVGAPHGALTKGLPDRESLAAYQLVGGVMAYQGIDG 279
SGERV NT CP LWD WKR LIPD ++ K ++ AAYQLVGGVMAYQG DG
Sbjct: 9 SGERVSNTWAICPSLWDKPWKRGLIPDMTRGRMISVWKAPAVKDEPAAYQLVGGVMAYQGDDG 71
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: G9PMB9_9ACTO (Uncharacterized protein n=1 Tax=Actinomyces sp. oral taxon 849 str. F0330 TaxID=653386 RepID=G9PMB9_9ACTO) HSP 1 Score: 74.3 bits (181), Expect = 4.930e-14 Identity = 43/72 (59.72%), Postives = 46/72 (63.89%), Query Frame = -2
Query: 6 FVSAPCGAPTSSGISSRFQLLSQRPGQVPHVLRTRSPL------GWMDLVRLACVKHAASVRPEPGSNSPTR 203
F + PC P IS F LS+R GQV HVL TRSPL G VRLACVKHAASVRPEPGSNSP +
Sbjct: 41 FPNPPCDRPGIPRISPTFMRLSRRRGQVTHVLLTRSPLIHTHQKGKRFTVRLACVKHAASVRPEPGSNSPNK 112
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: A0A0P4RI01_9ACTN (Uncharacterized protein n=2 Tax=Streptomyces TaxID=1883 RepID=A0A0P4RI01_9ACTN) HSP 1 Score: 69.7 bits (169), Expect = 7.120e-14 Identity = 36/63 (57.14%), Postives = 38/63 (60.32%), Query Frame = 1
Query: 91 SGERVRNT*GTCPGLWDNSWKRLLIPDDVGAPHGALTKGLPDRESLAAYQLVGGVMAYQGIDG 279
SGERV NT CP LWD WKR LIPD K ++ AAYQLVGGVMAYQG DG
Sbjct: 9 SGERVSNTWAICPSLWDKPWKRGLIPDTTSDRMVWWWKAPAVKDEPAAYQLVGGVMAYQGDDG 71
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: A0A5N0ITC8_9MYCO (Uncharacterized protein n=1 Tax=Mycobacterium sp. TaxID=1785 RepID=A0A5N0ITC8_9MYCO) HSP 1 Score: 69.7 bits (169), Expect = 1.190e-13 Identity = 39/58 (67.24%), Postives = 41/58 (70.69%), Query Frame = 1
Query: 7 LVGEFDPGSGRTLAACLTHASRT-RSIQ--PSGERVRNT*GTCPGLWDNSWKRLLIPD 171
L GEFDPGSGRTLAACLTHASRT R ++ SGERV NT CP L D K LIPD
Sbjct: 7 LFGEFDPGSGRTLAACLTHASRTERPLRGCSSGERVSNTWVICPALRDKLGKLGLIPD 64
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: A0A7C2B5M6_THERO (Uncharacterized protein n=1 Tax=Thermomicrobium roseum TaxID=500 RepID=A0A7C2B5M6_THERO) HSP 1 Score: 68.2 bits (165), Expect = 2.480e-13 Identity = 36/55 (65.45%), Postives = 37/55 (67.27%), Query Frame = 1
Query: 13 GEFDPGSGRTLAACLTHASRTRSIQPS---GERVRNT*GTCPGLWDNSWKRLLIP 168
GEFDPGSG TLAACL HASRT + G RVRNT GTCPG DN K LIP
Sbjct: 5 GEFDPGSGGTLAACLMHASRTGARDERADRGGRVRNTWGTCPGAGDNPGKLGLIP 59
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: A0A212LM72_9HYPH (Uncharacterized protein n=1 Tax=uncultured Pleomorphomonas sp. TaxID=442121 RepID=A0A212LM72_9HYPH) HSP 1 Score: 68.9 bits (167), Expect = 2.770e-12 Identity = 42/87 (48.28%), Postives = 49/87 (56.32%), Query Frame = -3
Query: 14 RCLGRPLPHQQADRPRGSPDPVTLSSAHHAVLRRHPVLAVVSNCYPRDRDKFLTCYAPVRH*VGWTSFDLHVLSTPPAFVLSQDQTL 274
R LG PLPHQ A++ R +P + LS R HPVLA +S Y + F P +FDLHVLS PPAFVLSQDQTL
Sbjct: 12 RRLGEPLPHQLANQTRANPLAINLSPK-----RAHPVLAEISLSYSEPKGMFPRVTHPSATPALLRAFDLHVLSLPPAFVLSQDQTL 93
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: A0A212LKU8_9HYPH (Uncharacterized protein n=2 Tax=uncultured Pleomorphomonas sp. TaxID=442121 RepID=A0A212LKU8_9HYPH) HSP 1 Score: 68.9 bits (167), Expect = 3.770e-12 Identity = 42/87 (48.28%), Postives = 49/87 (56.32%), Query Frame = -3
Query: 14 RCLGRPLPHQQADRPRGSPDPVTLSSAHHAVLRRHPVLAVVSNCYPRDRDKFLTCYAPVRH*VGWTSFDLHVLSTPPAFVLSQDQTL 274
R LG PLPHQ A++ R +P + LS R HPVLA +S Y + F P +FDLHVLS PPAFVLSQDQTL
Sbjct: 12 RRLGEPLPHQLANQTRANPLAINLSPK-----RAHPVLAEISLSYSEPKGMFPRVTHPSATPALLRAFDLHVLSLPPAFVLSQDQTL 93
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Match: A0A653VA00_9MICC (Uncharacterized protein n=1 Tax=Arthrobacter sp. 8AJ TaxID=2653130 RepID=A0A653VA00_9MICC) HSP 1 Score: 65.9 bits (159), Expect = 6.600e-12 Identity = 38/58 (65.52%), Postives = 40/58 (68.97%), Query Frame = -2
Query: 6 SGISSRFQLLSQRPGQVPHVLRTRSPLGWMD---LVRLACVKHAASVRPEPGSNSPTR 170
SGI F LSQ GQV HVL TRSPL +VRLACVKHAASV PEPGSNSP +
Sbjct: 47 SGIRPSFPGLSQSQGQVTHVLLTRSPLIHPQVGIIVRLACVKHAASVHPEPGSNSPLK 104 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56910.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig56910.1.1 >prot_P-wetherbeei_contig56910.1.1 ID=prot_P-wetherbeei_contig56910.1.1|Name=mRNA_P-wetherbeei_contig56910.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=39bp QILVGEFDPGSGRTLAACLTHASRTRSIQPSGERVRNT*back to top mRNA from alignment at P-wetherbeei_contig56910:181..477+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig56910.1.1 ID=mRNA_P-wetherbeei_contig56910.1.1|Name=mRNA_P-wetherbeei_contig56910.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig56910:181..477+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig56910:181..477+ >mRNA_P-wetherbeei_contig56910.1.1 ID=mRNA_P-wetherbeei_contig56910.1.1|Name=mRNA_P-wetherbeei_contig56910.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=117bp|location=Sequence derived from alignment at P-wetherbeei_contig56910:181..477+ (Phaeothamnion wetherbeei SAG_119_79)back to top |