mRNA_P-wetherbeei_contig56883.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig56883.1.1
Unique NamemRNA_P-wetherbeei_contig56883.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: A0A7Y4U5N3_9DELT (Alpha/beta hydrolase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7Y4U5N3_9DELT)

HSP 1 Score: 78.2 bits (191), Expect = 3.450e-16
Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEGRECGKPPLILIHGWCANLHHWDHQVNSF 138
            MP+  T+DGAELY++VEG E G PPL+ IHGWC+NL HW+ QV +F
Sbjct:    1 MPTFTTEDGAELYYQVEGTERGNPPLLFIHGWCSNLTHWEQQVRAF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: UPI001AD6A12A (alpha/beta fold hydrolase n=1 Tax=Streptomyces griseorubiginosus TaxID=67304 RepID=UPI001AD6A12A)

HSP 1 Score: 56.2 bits (134), Expect = 4.350e-8
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEGRECGKP-PLILIHGWCANLHHWDHQVNSF 138
            MP L  D GA L ++ EG   G+P PL+L+HGW AN H WDHQ+  F
Sbjct:    1 MPQLDVD-GATLTYDDEGPRDGEPTPLVLVHGWTANRHRWDHQMTHF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: K4QVV6_STRDJ (3-oxoadipate enol-lactone hydrolase n=2 Tax=Streptomyces TaxID=1883 RepID=K4QVV6_STRDJ)

HSP 1 Score: 55.1 bits (131), Expect = 1.170e-7
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEG-RECGKPPLILIHGWCANLHHWDHQVNSF 138
            MP L T DGA L ++ EG R+  + PL+L+HGW AN H WDHQ   F
Sbjct:    1 MPQL-TVDGATLTYDDEGPRDSAEVPLVLVHGWTANRHRWDHQTAHF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: UPI0016620EB2 (alpha/beta hydrolase n=1 Tax=Streptomyces sp. TRM68416 TaxID=2758412 RepID=UPI0016620EB2)

HSP 1 Score: 54.7 bits (130), Expect = 1.610e-7
Identity = 25/47 (53.19%), Postives = 31/47 (65.96%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEG-RECGKPPLILIHGWCANLHHWDHQVNSF 138
            MP L  D GA L ++ EG R+ G  PL+L+HGW AN H WDHQ+  F
Sbjct:    1 MPQLEVD-GAALTYDDEGPRDGGDVPLVLVHGWTANRHRWDHQLAHF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: UPI00143BEBA7 (alpha/beta hydrolase n=1 Tax=Streptomyces sp. SBST2-5 TaxID=2720025 RepID=UPI00143BEBA7)

HSP 1 Score: 54.7 bits (130), Expect = 1.620e-7
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEG-RECGKPPLILIHGWCANLHHWDHQVNSF 138
            MP    D GAEL ++ EG R+    PL+ IHGW AN H WDHQ+  F
Sbjct:    1 MPQFAAD-GAELIYDDEGPRDADAVPLVFIHGWTANRHRWDHQMEHF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: M3E174_9ACTN (3-oxoadipate enol-lactone hydrolase n=9 Tax=Streptomyces TaxID=1883 RepID=M3E174_9ACTN)

HSP 1 Score: 53.5 bits (127), Expect = 4.200e-7
Identity = 23/43 (53.49%), Postives = 28/43 (65.12%), Query Frame = 1 
Query:   13 ITDDGAELYFEVEG-RECGKPPLILIHGWCANLHHWDHQVNSF 138
             T DGAEL ++ EG R+    PL+LIHGW A+ H WDHQ   F
Sbjct:    4 FTVDGAELAYDDEGPRDSPSTPLVLIHGWTADRHRWDHQTAHF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: UPI0004CC4C97 (alpha/beta hydrolase n=1 Tax=Streptomyces fulvoviolaceus TaxID=285535 RepID=UPI0004CC4C97)

HSP 1 Score: 52.8 bits (125), Expect = 8.220e-7
Identity = 25/47 (53.19%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEG-RECGKPPLILIHGWCANLHHWDHQVNSF 138
            MP L  D GA L ++ EG R+    PL+LIHGW AN H WDHQ   F
Sbjct:    1 MPQLEVD-GAALTYDDEGPRDSDAVPLVLIHGWTANRHRWDHQTAHF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: S5VH25_STRC3 (3-oxoadipate enol-lactone hydrolase n=5 Tax=Streptomyces TaxID=1883 RepID=S5VH25_STRC3)

HSP 1 Score: 51.2 bits (121), Expect = 2.910e-6
Identity = 23/47 (48.94%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEG-RECGKPPLILIHGWCANLHHWDHQVNSF 138
            MP L  D GA L ++ EG R+    PL+ +HGW AN H WDHQ+  F
Sbjct:    1 MPQLDVD-GAVLTYDDEGPRDAVDVPLVFVHGWTANRHRWDHQLEHF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: A0A170V8R9_9ACTN (Carboxylesterase n=1 Tax=Streptomyces sp. F-3 TaxID=1840095 RepID=A0A170V8R9_9ACTN)

HSP 1 Score: 50.4 bits (119), Expect = 5.530e-6
Identity = 23/47 (48.94%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEG-RECGKPPLILIHGWCANLHHWDHQVNSF 138
            MP L  D GA L ++ EG R+    PL+ +HGW AN H WDHQ+  F
Sbjct:    1 MPQLEVD-GALLTYDDEGPRDGDGAPLVFVHGWTANRHRWDHQLEHF 46
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BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Match: A0A221P6K2_9ACTN (Alpha/beta hydrolase n=1 Tax=Streptomyces pluripotens TaxID=1355015 RepID=A0A221P6K2_9ACTN)

HSP 1 Score: 50.4 bits (119), Expect = 5.530e-6
Identity = 24/47 (51.06%), Postives = 29/47 (61.70%), Query Frame = 1 
Query:    1 MPSLITDDGAELYFEVEG-RECGKPPLILIHGWCANLHHWDHQVNSF 138
            MP L    GA L ++ EG R+    PL+L+HGW AN H WDHQV  F
Sbjct:    1 MPQLEVA-GAALTYDDEGPRDAMLTPLVLVHGWTANRHRWDHQVAHF 46
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig56883.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 13
Match NameE-valueIdentityDescription
A0A7Y4U5N3_9DELT3.450e-1663.04Alpha/beta hydrolase n=1 Tax=Deltaproteobacteria b... [more]
UPI001AD6A12A4.350e-853.19alpha/beta fold hydrolase n=1 Tax=Streptomyces gri... [more]
K4QVV6_STRDJ1.170e-753.193-oxoadipate enol-lactone hydrolase n=2 Tax=Strept... [more]
UPI0016620EB21.610e-753.19alpha/beta hydrolase n=1 Tax=Streptomyces sp. TRM6... [more]
UPI00143BEBA71.620e-751.06alpha/beta hydrolase n=1 Tax=Streptomyces sp. SBST... [more]
M3E174_9ACTN4.200e-753.493-oxoadipate enol-lactone hydrolase n=9 Tax=Strept... [more]
UPI0004CC4C978.220e-753.19alpha/beta hydrolase n=1 Tax=Streptomyces fulvovio... [more]
S5VH25_STRC32.910e-648.943-oxoadipate enol-lactone hydrolase n=5 Tax=Strept... [more]
A0A170V8R9_9ACTN5.530e-648.94Carboxylesterase n=1 Tax=Streptomyces sp. F-3 TaxI... [more]
A0A221P6K2_9ACTN5.530e-651.06Alpha/beta hydrolase n=1 Tax=Streptomyces pluripot... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig56883contigP-wetherbeei_contig56883:371..508 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1214101.BN159_0789
PFAMsAbhydrolase_1,Abhydrolase_6
Model size138
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryno signal peptide or anchor
Exons1
Evalue1.92e-08
EggNOG OGsCOG2267@1|root,COG2267@2|Bacteria,2I2GI@201174|Actinobacteria
DescriptionAlpha beta hydrolase
Cds size138
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186844.4401615-CDS-P-wetherbeei_contig56883:370..5081683186844.4401615-CDS-P-wetherbeei_contig56883:370..508Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig56883 371..508 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig56883.1.1prot_P-wetherbeei_contig56883.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig56883 371..508 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig56883.1.1

>prot_P-wetherbeei_contig56883.1.1 ID=prot_P-wetherbeei_contig56883.1.1|Name=mRNA_P-wetherbeei_contig56883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=46bp
MPSLITDDGAELYFEVEGRECGKPPLILIHGWCANLHHWDHQVNSF
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mRNA from alignment at P-wetherbeei_contig56883:371..508+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig56883.1.1 ID=mRNA_P-wetherbeei_contig56883.1.1|Name=mRNA_P-wetherbeei_contig56883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=138bp|location=Sequence derived from alignment at P-wetherbeei_contig56883:371..508+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCAGCTTAATTACCGACGATGGCGCTGAACTGTACTTCGAAGTAGA
AGGTCGGGAGTGCGGCAAGCCGCCGCTGATCCTGATTCACGGCTGGTGCG
CGAATCTCCATCACTGGGATCATCAGGTCAACAGCTTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig56883:371..508+

>mRNA_P-wetherbeei_contig56883.1.1 ID=mRNA_P-wetherbeei_contig56883.1.1|Name=mRNA_P-wetherbeei_contig56883.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=138bp|location=Sequence derived from alignment at P-wetherbeei_contig56883:371..508+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCCCAGCTTAATTACCGACGATGGCGCTGAACTGTACTTCGAAGTAGA
AGGTCGGGAGTGCGGCAAGCCGCCGCTGATCCTGATTCACGGCTGGTGCG
CGAATCTCCATCACTGGGATCATCAGGTCAACAGCTTC
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