mRNA_P-wetherbeei_contig568.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig568.2.1
Unique NamemRNA_P-wetherbeei_contig568.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: G4YF15_PHYSP (PCIF1_WW domain-containing protein n=11 Tax=Phytophthora TaxID=4783 RepID=G4YF15_PHYSP)

HSP 1 Score: 252 bits (644), Expect = 2.390e-75
Identity = 143/323 (44.27%), Postives = 195/323 (60.37%), Query Frame = 2
Query:  659 GLCAALVAAGAPEKQAVNVCRELGRAAVAAAKTLRKQERAGPXXXXXXXSAGHVSASWSAGREACTLALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQ-ASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTDKACAELRTAFASLQATE 1624
            GL   L  AGA +  A   C+EL R +    +   +Q+              HV+A+    R+   L  G S+V+++ AH+AK RE++ R  G  G GS                    +F +ALF  LLRY+SL GGGFQ A+++    D L ++ D  MECFASP NCR+ R+CSAF DTD AFGS+GSFF+F P +G FE NPPF+P+VI R A H+ ALL AA   PL+F+V++PAW+ T GW++L  SR+ + H+ + QK HG+CEGKQQ+R  R+R+ASFDTSV   QN+    +WP T+K    L++AF S QA E
Sbjct:   60 GLFEELRKAGATKSGATKKCKELTRESERLLRKFGQQDFVAGKKKRV-----HVAAAEDGMRQ---LTYGNSTVKLSAAHFAKLREMYARKQGLGGDGSSMAPK------------DQRSFESALFCLLLRYDSLDGGGFQQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDCAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAAD-GPLAFIVIIPAWQDTEGWQQLNSSRYNQTHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLDSLKSAFKSKQADE 361          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: A0A0P1A8A2_PLAHL (Phosphorylated CTD interacting factor 1, WW domain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A8A2_PLAHL)

HSP 1 Score: 254 bits (650), Expect = 3.880e-75
Identity = 131/257 (50.97%), Postives = 171/257 (66.54%), Query Frame = 2
Query:  857 LALGRSSVRVNFAHYAKARELF-RRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTDKACAELRTAFASLQATE 1624
            L  G+S+V+++  H+AK REL+ R+HG  NG GS                 +   F  ALF  LLRY+SL GGGFQA+++    D L  + D  MECFASP NCR+ R+CSAF DTD AFGS+GSFF+F P +G FE NPPF+P+VI R A H+  LL AA   PL+F+V++P+W+ T GW++L  SR+ +RHV + QK HGFCEGKQQLR  R+R+ASFDTS+  LQN+    +WP TD+    L+ AF S QA E
Sbjct:  202 LTFGQSTVKISAIHFAKMRELYARKHGLDNGDGSSMSLK------------NQRHFATALFCLLLRYDSLDGGGFQAALNEECFDVLLEEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMAELLTAAN-GPLTFIVIIPSWQKTEGWQQLNASRYNQRHVLIPQKQHGFCEGKQQLRKTRWRIASFDTSIFFLQNSKACNQWPVTDQKLKLLKQAFKSKQADE 445          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: D7FYX1_ECTSI (PCIF1_WW domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYX1_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 7.580e-75
Identity = 162/339 (47.79%), Postives = 208/339 (61.36%), Query Frame = 2
Query:  614 GEPFPWPSRNLACPQGLCAALVAAGAPEKQAVNVCRELGRAAVAAAKTLRKQERA---GPXXXXXXXSAGHVSASWSAGREACTLALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQ-NAAGAARWPCT-DKACAELRTAFASLQ 1615
            G+P   P+ +   P GL A L A G  + Q+ N+C ELGRA+ +A KTL+KQ R    GP       S   V+A    G     L LG++ +R+N AHY K +ELF R      G +               G     FH+ LFSCL+RYE+LQGGGFQAS+ G   D L ++    MECFASPFNCR+ RYCSAFPDTD  FGS GSFF+F+P  G++E NPPFV +VI++ A H++ LL A  A  L+FVV++P WE + GW+RL  S F+ +H++L QKDHG+CEGKQ LR  RYR+ASF TSV  LQ + A   + P T  +AC EL  AFA  Q
Sbjct:  138 GDPI-LPAESFFDP-GLDAELQALGVHKAQSRNLCCELGRASKSALKTLKKQLRGVVNGPAAAVSAPSK-RVAARKLDGNT-YVLQLGKNKLRMNSAHYDKMKELFSRS--RVEGAARRQSSSTEHPPPAWIGD----FHDCLFSCLMRYEALQGGGFQASMGGDAFDVLLKRFGARMECFASPFNCRYSRYCSAFPDTDGPFGSAGSFFDFQPTQGAYEANPPFVRDVILKMANHMDGLLQAT-AKALTFVVIIPCWEDSAGWKRLRDSAFLSKHIKLDQKDHGYCEGKQHLRRNRYRLASFHTSVFFLQTDVARRQQSPETLGQACRELERAFALRQ 465          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: A0A6A3R028_9STRA (PCIF1_WW domain-containing protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3R028_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.360e-74
Identity = 142/322 (44.10%), Postives = 197/322 (61.18%), Query Frame = 2
Query:  659 GLCAALVAAGAPEKQAVNVCRELGRAAVAAAKTLRKQERAGPXXXXXXXSAGHVSASWSAGREACTLALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTDKACAELRTAFASLQATE 1624
            GL   L  AGA +  A+  C+EL R +    +   +Q+              HV+A+    R+   L+ G S+V+++ AH+AK RE++ R  G +G GS                    +F +ALF  LLRY+SL GGGFQA+++    D L +  D  MECFASP NCR+ R+CSAF DTD AFGS+GSFF+F P +G FE NPPF+P+VI R A H+ ALL AA   PL+F+V++PAW+ T GW++L  SR+ + H+ + QK HG+CEGKQQ+R  R+R+ASFDTSV   QN+    +WP T++    L++AF S QA E
Sbjct:  149 GLFEELRKAGATKSGAIKKCKELTRESERMLRRFGQQDFVAGKKKKV-----HVAAAEDDVRQ---LSYGNSTVKLSAAHFAKLREMYARKLGMSGDGSSMTPKH------------QRSFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAAD-GPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEEKLESLKSAFKSKQADE 449          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: D0NY28_PHYIT (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NY28_PHYIT)

HSP 1 Score: 249 bits (635), Expect = 1.820e-74
Identity = 128/256 (50.00%), Postives = 166/256 (64.84%), Query Frame = 2
Query:  857 LALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTDKACAELRTAFASLQATE 1624
            L  GRS+V+++  H+ K RE+F +  G  G GS                        ALF  LLRYESL GGGFQA+++    D L ++ D  MECFASP NCR+ R+CSAF DTD AFGS+GSFF+F P +G FE NPPF+P+VI R A H+ ALL AA   PL+F+V++PAW+ T GW++L  SRF +RH+ + QK HG+CEGKQQ+R  R+R+ASFDTSV   QN+    +WP T+K    L+ AF S QA E
Sbjct:   84 LTYGRSTVKLSANHFTKLREMFAKKQGLGGDGSNMAPK------------DQQQLECALFCLLLRYESLDGGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAAD-GPLAFIVIIPAWQETEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEKKLEGLKQAFRSKQADE 326          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: A0A835YQ92_9STRA (Phosphorylated CTD interacting factor 1 WW domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQ92_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.310e-73
Identity = 176/372 (47.31%), Postives = 210/372 (56.45%), Query Frame = 2
Query:  581 VVPEWGFYDESGEPFP---WPSRNLACPQG------LCAALVAAGAPEKQAVNVCRELGRAAVAAAKTLRKQERAGPXXXXXXXSAGHVSASWSAGREACTLALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALL--AAAKASPLSFVVVVPAWEATPGWRRLAGSRFV-RRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAA------------RWPCTDKACAELRTAFASLQATE 1624
            V  +W F  ++ E       P  +   P+G      L AAL AAGA   QA    RELGRAA AA +   KQ R  P       S  H +A+       C ++ GR  +RVN AHY K R L   HG      S       XXXXXXX   + A FH+ALF+ LLRYESL GGGFQA+  G V D L R+    MECFASP N R+ R+C+AFPDTD  FG   SFF+FRPA+GS+E NPPFVP V+     H+ ALL  AAA  + L F V+VPAWE    WRRLA S    RR + LAQ+DHG+CEG+QQLR  RY++AS  TSV  LQ  A AA            +WP T+ AC ELR AF   QA E
Sbjct:  117 VFEKWQFGQKARERATDGALPGDDPLLPRGAFRDGTLVAALEAAGADGAQAHVAVRELGRAARAALQVFNKQLRTLPP------SRRHATAARVDADTYC-VSYGRHRLRVNSAHYDKLRALHAAHG------SSSAQRQRXXXXXXXGARAAAPFHDALFALLLRYESLAGGGFQAAAPGDVFDVLLRRFGADMECFASPLNARYARHCTAFPDTDAPFGGACSFFDFRPASGSYEANPPFVPAVMDMMTEHMNALLRAAAAAGAALMFTVIVPAWEHEASWRRLARSPHAQRRRLLLAQRDHGYCEGRQQLRRTRYKIASAPTSVFFLQTPAAAAXXXXXXXXXXXAKWPVTEAACDELREAFRPRQADE 475          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: A0A3R7HJ33_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7HJ33_9STRA)

HSP 1 Score: 249 bits (637), Expect = 2.080e-73
Identity = 142/322 (44.10%), Postives = 190/322 (59.01%), Query Frame = 2
Query:  659 GLCAALVAAGAPEKQAVNVCRELGRAAVAAAKTLRKQERAGPXXXXXXXSAGHVSASWSAGREACTLALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTDKACAELRTAFASLQATE 1624
            GL   L  AGA +  A   C+EL R +    +   +Q               HV+ +     +   L  G S V+++ AH+AK RE++ R    +G GS                     F +ALF  LLRY+SL GGGFQA+++    D L +  D  MECFASP N R+ R+CSAF DTD AFGS+GSFF+F P +G FE NPPF+P+VI R A H+ ALL AA   PL+F+V++PAW+ T GW++L  SR+ + H+R+ QK HG+CEGKQQ+R  R+R+ASFDTSV   QNA   ++WP T+KA   L+ AF S QA E
Sbjct:  135 GLFEELRKAGATKSGATKKCKELTRESERMLRKFSQQNFVAGKKKHV-----HVAIAEDGMHQ---LTYGNSVVKLSAAHFAKLREMYARKQDFSGNGSSMVPKARHE------------FESALFCLLLRYDSLDGGGFQAALNEECFDVLLKYFDAKMECFASPLNSRYSRFCSAFLDTDAAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAAD-GPLAFIVIIPAWQETEGWQQLNASRYNQIHLRIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAKACSKWPVTEKALESLKQAFKSKQADE 435          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: A0A6A4A4B0_9STRA (PCIF1_WW domain-containing protein n=3 Tax=Phytophthora fragariae TaxID=53985 RepID=A0A6A4A4B0_9STRA)

HSP 1 Score: 253 bits (647), Expect = 4.680e-73
Identity = 142/322 (44.10%), Postives = 197/322 (61.18%), Query Frame = 2
Query:  659 GLCAALVAAGAPEKQAVNVCRELGRAAVAAAKTLRKQERAGPXXXXXXXSAGHVSASWSAGREACTLALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTDKACAELRTAFASLQATE 1624
            GL   L  AGA +  A+  C+EL R +    +   +Q+              HV+A+    R+   L+ G S+V+++ AH+AK RE++ R  G +G GS                    +F +ALF  LLRY+SL GGGFQA+++    D L +  D  MECFASP NCR+ R+CSAF DTD AFGS+GSFF+F P +G FE NPPF+P+VI R A H+ ALL AA   PL+F+V++PAW+ T GW++L  SR+ + H+ + QK HG+CEGKQQ+R  R+R+ASFDTSV   QN+    +WP T++    L++AF S QA E
Sbjct:  149 GLFEELRKAGATKSGAIKKCKELTRESERMLRRFGQQDFVAGKKKKV-----HVAAAEDDVRQ---LSYGNSTVKLSAAHFAKLREMYARKLGMSGDGSSMTPKH------------QRSFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKGFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAAD-GPLAFIVIIPAWQDTEGWQQLNASRYNQTHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNSKACNKWPVTEEKLESLKSAFKSKQADE 449          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: A0A329T4D0_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4D0_9STRA)

HSP 1 Score: 249 bits (635), Expect = 7.550e-73
Identity = 127/256 (49.61%), Postives = 167/256 (65.23%), Query Frame = 2
Query:  857 LALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTDKACAELRTAFASLQATE 1624
            L  G S+V+++  H+AK RE+F R  G    GS                     F +ALF  LLRY+SL GGGFQA+++    D L ++ D  MECFASP NCR+ R+CSAF DTD AFGS+GSFF+F P +G FE NPPF+P+VI R A H+ ALL AA   PL+F+V++PAW+ T GW++L  SRF +RH+ + QK HG+CEGKQQ+R  R+R+ASFDTS+   QN+    +WP T+K    L+ AF S QA E
Sbjct:  216 LTYGHSTVKLSADHFAKLREMFARKQGLGDDGSNMAPK------------DQRQFESALFCLLLRYDSLDGGGFQAALNEECFDVLLKEFDCKMECFASPLNCRYSRFCSAFLDTDFAFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLNAAD-GPLAFIVIIPAWQETEGWQQLNASRFNQRHLLVPQKQHGYCEGKQQIRKTRWRIASFDTSLFFWQNSKACNKWPVTEKKLESLKQAFKSKQADE 458          
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Match: A0A3M6VL48_9STRA (PCIF1_WW domain-containing protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VL48_9STRA)

HSP 1 Score: 248 bits (633), Expect = 9.000e-73
Identity = 126/256 (49.22%), Postives = 166/256 (64.84%), Query Frame = 2
Query:  857 LALGRSSVRVNFAHYAKARELFRRHGGTNGGGSXXXXXXXXXXXXXXSGGSDAAFHNALFSCLLRYESLQGGGFQASVHGGVLDALRRQMDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNPPFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFVRRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTDKACAELRTAFASLQATE 1624
            L  G+S V+++ AH+AK REL+ R  G +  GS                     F +ALF  LLRY+SL GGGFQA+++    D L ++ +  MECFASP NCR+ R+CSAF DTD  FGS+GSFF+F P +G FE NPPF+P+VI R A H+ ALL AA   PL+F++++P W+ T GW++L  SRF +RH+ + QK HG+CEGKQQ+R  R+R+ASFDTSV   QNA     WP T+K    L+ AF S QA E
Sbjct:  196 LTYGKSMVKLSAAHFAKLRELYARKRGLDDDGSSMAPK------------DQRQFESALFCLLLRYDSLSGGGFQAALNEECFDVLLKEFNCKMECFASPLNCRYSRFCSAFLDTDFVFGSVGSFFDFSPRSGCFEANPPFIPKVIKRMADHMTALLTAAD-GPLAFIIIIPTWQKTEGWQQLNASRFNQRHLLIPQKQHGYCEGKQQIRKTRWRIASFDTSVFFWQNAMACNEWPVTEKKLESLKHAFRSKQAEE 438          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig568.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G4YF15_PHYSP2.390e-7544.27PCIF1_WW domain-containing protein n=11 Tax=Phytop... [more]
A0A0P1A8A2_PLAHL3.880e-7550.97Phosphorylated CTD interacting factor 1, WW domain... [more]
D7FYX1_ECTSI7.580e-7547.79PCIF1_WW domain-containing protein n=1 Tax=Ectocar... [more]
A0A6A3R028_9STRA1.360e-7444.10PCIF1_WW domain-containing protein n=4 Tax=Phytoph... [more]
D0NY28_PHYIT1.820e-7450.00PCIF1_WW domain-containing protein n=1 Tax=Phytoph... [more]
A0A835YQ92_9STRA1.310e-7347.31Phosphorylated CTD interacting factor 1 WW domain-... [more]
A0A3R7HJ33_9STRA2.080e-7344.10PCIF1_WW domain-containing protein n=3 Tax=Phytoph... [more]
A0A6A4A4B0_9STRA4.680e-7344.10PCIF1_WW domain-containing protein n=3 Tax=Phytoph... [more]
A0A329T4D0_9STRA7.550e-7349.61PCIF1_WW domain-containing protein n=1 Tax=Phytoph... [more]
A0A3M6VL48_9STRA9.000e-7349.22PCIF1_WW domain-containing protein n=1 Tax=Peronos... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig568contigP-wetherbeei_contig568:5465..7088 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog115417.EPrPW00000020450
PFAMsPCIF1_WW
Model size1624
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons1
Evalue6.74e-63
EggNOG OGs28P6D@1|root,2QVT7@2759|Eukaryota,1MIPJ@121069|Pythiales
DescriptionPhosphorylated CTD interacting factor 1 WW domain
Cds size501
COG categoryA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186843.3481123-CDS-P-wetherbeei_contig568:5464..59651683186843.3481123-CDS-P-wetherbeei_contig568:5464..5965Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig568 5465..5965 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186843.3625252-UTR-P-wetherbeei_contig568:5965..70881683186843.3625252-UTR-P-wetherbeei_contig568:5965..7088Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig568 5966..7088 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig568.2.1prot_P-wetherbeei_contig568.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig568 5465..5965 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig568.2.1

>prot_P-wetherbeei_contig568.2.1 ID=prot_P-wetherbeei_contig568.2.1|Name=mRNA_P-wetherbeei_contig568.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=167bp
MDVIMECFASPFNCRWERYCSAFPDTDTAFGSLGSFFEFRPAAGSFEVNP
PFVPEVIVRTAAHIEALLAAAKASPLSFVVVVPAWEATPGWRRLAGSRFV
RRHVRLAQKDHGFCEGKQQLRAARYRVASFDTSVLVLQNAAGAARWPCTD
KACAELRTAFASLQATE
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mRNA from alignment at P-wetherbeei_contig568:5465..7088-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig568.2.1 ID=mRNA_P-wetherbeei_contig568.2.1|Name=mRNA_P-wetherbeei_contig568.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1624bp|location=Sequence derived from alignment at P-wetherbeei_contig568:5465..7088- (Phaeothamnion wetherbeei SAG_119_79)
CGAAAAGGAAGCGCGAAAGAGAAAGAGATCAAGCAGTTCTGAGCAGCTTT ATGGCAATGGTACGCGGCGATAACGAGATATCGTCCCTTCTGGCTGGCCT TGAGGGCATTGCTCCCGCGGAGGCCCGTCAAGGGTTGCCTGAGCCGGAAA AAACGAGAGGCGCCGCTGCTCCCGACGAAATCTGGGATCCCCTGCACACC GTTTCCGTCGACTTGCTAAGTGGAGAAGGCGGAGCCGCTCCGCTGCCGTC TACGCCGCCGCCATGGCTGGAATCTCTACGGTACCAAGCCATGGCCAAAG TAAAGGCGGGCTTTGTTGCCTTGTGCACGGAGCTCGGGGTCGCCAAGGCG CTCAAATCTGATGCCTTTGAACGCTGGCACTTTTGCCGCAAGCTCGTGGA CGAGACCGGCGAGGATCCTCTGCTTCCAGCGGGACCGAAGCTCTTTGCTG ATCCTGTGAGCATTTCCTTTTGCCTCCTGCTGTCATTCCATTGCGAAGGG CTTTGTCTGGCAGTAAGCGGTGCGAGGAGGGAAAGAGATTGATACGCCCA GATAGGCTCAAGAGCCGTTGAACTATCACTGTCGTGCCTGAATGGGGCTT TTATGACGAAAGCGGCGAACCTTTTCCGTGGCCCTCGCGCAACCTTGCCT GTCCGCAGGGGCTGTGCGCGGCGCTCGTCGCGGCGGGCGCCCCCGAGAAG CAGGCGGTCAACGTGTGCCGGGAACTCGGCCGTGCCGCCGTGGCGGCCGC AAAGACGCTGCGGAAGCAGGAGCGCGCGGGGCCGGGCGGCGGCGGCGGCA GCAGCAGCGCCGGCCACGTTTCCGCGAGCTGGTCGGCCGGGCGCGAGGCG TGCACGCTGGCGCTGGGCCGCTCATCCGTCCGCGTCAATTTCGCCCACTA CGCCAAGGCGCGGGAGCTCTTTCGCCGCCATGGCGGAACCAACGGCGGCG GCAGCGGTTGCGGCGGCGGCGGAAGCAGCGACGGCGGCCGTACCGGCAGC GGCGGGAGCGACGCGGCGTTTCACAACGCGCTGTTCTCGTGTCTCCTGCG GTATGAGTCGCTGCAGGGCGGCGGCTTCCAGGCATCCGTCCACGGCGGCG TGCTGGACGCGCTCCGGAGACAGATGGACGTCATCATGGAGTGCTTCGCG TCTCCGTTCAACTGCCGCTGGGAGCGCTACTGCAGTGCCTTCCCGGACAC TGACACCGCCTTCGGCTCCCTCGGAAGCTTCTTCGAGTTCCGCCCCGCCG CCGGCTCCTTCGAAGTGAACCCGCCGTTCGTCCCTGAGGTGATCGTCCGG ACTGCTGCCCACATCGAAGCGCTGCTGGCAGCGGCGAAAGCGTCACCGCT TTCCTTCGTCGTGGTGGTGCCTGCGTGGGAGGCGACGCCCGGCTGGCGCC GCCTCGCCGGCAGCCGCTTCGTGCGGCGGCACGTCCGGCTGGCGCAAAAG GACCACGGGTTCTGCGAAGGAAAGCAGCAGCTGCGGGCGGCCCGCTACCG CGTGGCGTCGTTTGACACGAGTGTGTTGGTGCTGCAGAACGCCGCCGGCG CCGCCCGGTGGCCGTGCACGGACAAGGCCTGCGCGGAGCTGCGGACGGCC TTCGCATCGCTGCAAGCCACCGAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig568:5465..7088-

>mRNA_P-wetherbeei_contig568.2.1 ID=mRNA_P-wetherbeei_contig568.2.1|Name=mRNA_P-wetherbeei_contig568.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=501bp|location=Sequence derived from alignment at P-wetherbeei_contig568:5465..7088- (Phaeothamnion wetherbeei SAG_119_79)
ATGGACGTCATCATGGAGTGCTTCGCGTCTCCGTTCAACTGCCGCTGGGA
GCGCTACTGCAGTGCCTTCCCGGACACTGACACCGCCTTCGGCTCCCTCG
GAAGCTTCTTCGAGTTCCGCCCCGCCGCCGGCTCCTTCGAAGTGAACCCG
CCGTTCGTCCCTGAGGTGATCGTCCGGACTGCTGCCCACATCGAAGCGCT
GCTGGCAGCGGCGAAAGCGTCACCGCTTTCCTTCGTCGTGGTGGTGCCTG
CGTGGGAGGCGACGCCCGGCTGGCGCCGCCTCGCCGGCAGCCGCTTCGTG
CGGCGGCACGTCCGGCTGGCGCAAAAGGACCACGGGTTCTGCGAAGGAAA
GCAGCAGCTGCGGGCGGCCCGCTACCGCGTGGCGTCGTTTGACACGAGTG
TGTTGGTGCTGCAGAACGCCGCCGGCGCCGCCCGGTGGCCGTGCACGGAC
AAGGCCTGCGCGGAGCTGCGGACGGCCTTCGCATCGCTGCAAGCCACCGA
G
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